Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing DvMF_2422 gene

Properties
Regulog: RpoN - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Sigma54
Regulation mode:
Biological process: Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism
Effector:
Phylum: Proteobacteria
Built upon 487 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Desulfovibrio piger ATCC 29098
Position: -54
Score: 5.22538
Sequence: CATGGCACGCTTTATGCTT
Locus tag: DESPIG_00690
Name: null
Funciton: hypothetical protein
Locus tag: DESPIG_00691
Name: null
Funciton: hypothetical protein
Locus tag: DESPIG_00692
Name: null
Funciton: hypothetical protein
Locus tag: DESPIG_00693
Name: null
Funciton: Type III secretion chaperone protein for YopD (SycD)
Locus tag: DESPIG_00694
Name: null
Funciton: Type III secretion host injection protein (YopB)
Locus tag: DESPIG_00695
Name: null
Funciton: Type III secretion host injection and negative regulator protein (YopD)
Locus tag: DESPIG_00696
Name: null
Funciton: Tir chaperone family protein
Locus tag: DESPIG_00697
Name: yscC
Funciton: Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG)
Locus tag: DESPIG_00698
Name: null
Funciton: Type III secretion inner membrane protein (YscD,homologous to flagellar export components)
Locus tag: DESPIG_00699
Name: null
Funciton: hypothetical protein
Locus tag: DESPIG_00700
Name: null
Funciton: Type III secretion system protein, YscF family
Locus tag: DESPIG_00701
Name: null
Funciton: hypothetical protein
Locus tag: DESPIG_00702
Name: null
Funciton: hypothetical protein
Locus tag: DESPIG_00703
Name: escJ
Funciton: Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ)
Locus tag: DESPIG_00704
Name: null
Funciton: hypothetical protein
Locus tag: DESPIG_00705
Name: sctL
Funciton: type III secretion protein, YopL family putative type III secretion protein
Locus tag: DESPIG_00706
Name: null
Funciton: Type III secretion cytoplasmic ATP synthase (EC 3.6.3.14, YscN,SpaL,MxiB,HrcN,EscN)
Locus tag: DESPIG_00707
Name: null
Funciton: Type III secretion spans bacterial envelope protein (YscO)
DESPIG_00690-DESPIG_00691-DESPIG_00692-DESPIG_00693-DESPIG_00694-DESPIG_00695-DESPIG_00696-yscC-DESPIG_00698-DESPIG_00699-DESPIG_00700-DESPIG_00701-DESPIG_00702-escJ-DESPIG_00704-sctL-DESPIG_00706-DESPIG_00707 -54 5.2 CATGGCACGCTTTATGCTT DESPIG_00690
Desulfovibrio vulgaris Hildenborough
Position: -62
Score: 4.64067
Sequence: CATGGCATACTTGCTGCTA
Locus tag: DVUA203
Name: DVUA203
Funciton: hypothetical protein
Locus tag: DVUA0109
Name: null
Funciton: Type III secretion chaperone protein for YopD (SycD)
Locus tag: DVUA0110
Name: null
Funciton: Type III secretion host injection protein (YopB)
Locus tag: DVUA0111
Name: null
Funciton: Type III secretion host injection and negative regulator protein (YopD)
Locus tag: DVUA201
Name: DVUA201 (DVUA0111.1)
Funciton: Tir chaperone family protein
Locus tag: DVUA0112
Name: null
Funciton: Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG)
Locus tag: DVUA0113
Name: null
Funciton: Type III secretion inner membrane protein (YscD,homologous to flagellar export components)
Locus tag: DVUA0114
Name: null
Funciton: hypothetical protein
Locus tag: DVUA0115
Name: null
Funciton: Type III secretion system protein, YscF family
Locus tag: DVUA0116
Name: null
Funciton: hypothetical protein
Locus tag: DORF2111
Name: DORF2111
Funciton: null
Locus tag: DVUA0117
Name: escJ
Funciton: Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ)
Locus tag: DVUA200
Name: DVUA200
Funciton: null
Locus tag: DVUA0118
Name: sctL
Funciton: type III secretion protein, YopL family putative type III secretion protein
Locus tag: DVUA0119
Name: sctN
Funciton: Type III secretion cytoplasmic ATP synthase (EC 3.6.3.14, YscN,SpaL,MxiB,HrcN,EscN)
Locus tag: DVUA0119.1
Name: DVUA0119.1
Funciton: null
Locus tag: DVUA0120
Name: null
Funciton: HpaP protein; Type III secretion protein (YscP)
Locus tag: DVUA0121
Name: null
Funciton: Type III secretion inner membrane protein (YscQ,homologous to flagellar export components)
Locus tag: DVUA0122
Name: yscR
Funciton: Type III secretion inner membrane protein (YscR,SpaR,HrcR,EscR,homologous to flagellar export components)
Locus tag: DVUA0123
Name: null
Funciton: anti-anti-sigma factor
Locus tag: DVUA0124
Name: rsbW
Funciton: putative anti-sigma regulatory factor, serine/threonine protein kinase
Locus tag: DVUA0125
Name: slt
Funciton: transglycosylase, SLT family
DVUA203-DVUA0109-DVUA0110-DVUA0111-DVUA201 (DVUA0111.1)-DVUA0112-DVUA0113-DVUA0114-DVUA0115-DVUA0116-DORF2111-escJ-DVUA200-sctL-sctN-DVUA0119.1-DVUA0120-DVUA0121-yscR-DVUA0123-rsbW-slt -62 4.6 CATGGCATACTTGCTGCTA DVUA203
Desulfovibrio vulgaris str. Miyazaki F
Position: -56
Score: 4.64875
Sequence: TTTGGCATCCTTGCTGCAA
Locus tag: DvMF_2420
Name: null
Funciton: hypothetical protein
Locus tag: DvMF_2421
Name: null
Funciton: hypothetical protein
Locus tag: DvMF_2422
Name: null
Funciton: Type III secretion chaperone protein for YopD (SycD)
Locus tag: DvMF_2423
Name: null
Funciton: Type III secretion host injection protein (YopB)
Locus tag: DvMF_2424
Name: null
Funciton: Type III secretion host injection and negative regulator protein (YopD)
Locus tag: DvMF_2425
Name: null
Funciton: Tir chaperone family protein
Locus tag: DvMF_2426
Name: yscC
Funciton: Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG)
Locus tag: DvMF_2427
Name: null
Funciton: Type III secretion inner membrane protein (YscD,homologous to flagellar export components)
Locus tag: DvMF_2428
Name: null
Funciton: hypothetical protein
Locus tag: DvMF_2429
Name: null
Funciton: Type III secretion system protein, YscF family
Locus tag: DvMF_2430
Name: null
Funciton: hypothetical protein
Locus tag: DvMF_2431
Name: null
Funciton: hypothetical protein
Locus tag: DvMF_2432
Name: escJ
Funciton: Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ)
Locus tag: DvMF_2433
Name: null
Funciton: hypothetical protein
Locus tag: DvMF_2434
Name: sctL
Funciton: type III secretion protein, YopL family putative type III secretion protein
DvMF_2420-DvMF_2421-DvMF_2422-DvMF_2423-DvMF_2424-DvMF_2425-yscC-DvMF_2427-DvMF_2428-DvMF_2429-DvMF_2430-DvMF_2431-escJ-DvMF_2433-sctL -56 4.6 TTTGGCATCCTTGCTGCAA DvMF_2420
Lawsonia intracellularis PHE/MN1-00
Position: -193
Score: 4.72107
Sequence: TTTGGCATAGTCTCTGCAG
Locus tag: LI1157
Name: null
Funciton: Type III secretion chaperone protein for YopD (SycD)
Locus tag: LI1158
Name: null
Funciton: Type III secretion host injection protein (YopB)
Locus tag: LI1159
Name: null
Funciton: hypothetical protein
LI1157-LI1158-LI1159 -193 4.7 TTTGGCATAGTCTCTGCAG LI1157