Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing glcF gene

Properties
Regulog: RpoN - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Sigma54
Regulation mode:
Biological process: Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism
Effector:
Phylum: Proteobacteria
Built upon 487 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Desulfohalobium retbaense DSM 5692
Position: -90
Score: 4.54098
Sequence: TATGGCATGGATATTGAAT
Locus tag: Dret_1039
Name: lldP
Funciton: L-lactate permease
Locus tag: Dret_1038
Name: glcD
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
Locus tag: Dret_1037
Name: glcF
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
Locus tag: Dret_1036
Name: por
Funciton: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
Locus tag: Dret_1035
Name: pta
Funciton: Phosphate acetyltransferase (EC 2.3.1.8)
Locus tag: Dret_1034
Name: ackA
Funciton: Acetate kinase (EC 2.7.2.1)
Locus tag: Dret_1033
Name: DVU3031
Funciton: BioD-like N-terminal domain of phosphotransacetylase
Locus tag: Dret_1032
Name: lldG
Funciton: L-lactate dehydrogenase, hypothetical protein subunit LldG
Locus tag: Dret_1031
Name: lldEF
Funciton: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
lldP-glcD-glcF-por-pta-ackA-DVU3031-lldG-lldEF -90 4.5 TATGGCATGGATATTGAAT Dret_1039
Desulfomicrobium baculatum DSM 4028
Position: -91
Score: 4.28116
Sequence: AGTGGCACAAAACTTGTTT
Locus tag: Dbac_1044
Name: por
Funciton: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
Locus tag: Dbac_1045
Name: lldP
Funciton: L-lactate permease
Locus tag: Dbac_1046
Name: glcD
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
Locus tag: Dbac_1047
Name: glcF
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
Locus tag: Dbac_1048
Name: pta
Funciton: Phosphate acetyltransferase (EC 2.3.1.8)
Locus tag: Dbac_1049
Name: ackA
Funciton: Acetate kinase (EC 2.7.2.1)
por-lldP-glcD-glcF-pta-ackA -91 4.3 AGTGGCACAAAACTTGTTT Dbac_1044
Desulfovibrio desulfuricans G20
Position: -163
Score: 4.84357
Sequence: CATGGCATACTTTTTGTTT
Locus tag: Dde_3237
Name: por
Funciton: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
Locus tag: Dde_3238
Name: lldP
Funciton: L-lactate permease
Locus tag: Dde_3239
Name: glcD
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
Locus tag: Dde_3240
Name: glcF
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
Locus tag: Dde_3241
Name: pta
Funciton: Phosphate acetyltransferase (EC 2.3.1.8)
Locus tag: Dde_3242
Name: ackA
Funciton: Acetate kinase (EC 2.7.2.1)
Locus tag: Dde_3243
Name: DVU3031
Funciton: BioD-like N-terminal domain of phosphotransacetylase
Locus tag: Dde_3244
Name: lldG
Funciton: L-lactate dehydrogenase, hypothetical protein subunit LldG
Locus tag: Dde_3245
Name: lldEF
Funciton: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
por-lldP-glcD-glcF-pta-ackA-DVU3031-lldG-lldEF -163 4.8 CATGGCATACTTTTTGTTT Dde_3237
Desulfovibrio magneticus RS-1
Position: -84
Score: 4.35709
Sequence: GATGGCACACGACTTGCGA
Locus tag: DMR_20070
Name: por
Funciton: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
Locus tag: DMR_20060
Name: glcD
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
Locus tag: DMR_20050
Name: glcF
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
Locus tag: DMR_20040
Name: null
Funciton: CoA-binding domain protein
Locus tag: DMR_20030
Name: DVU3031
Funciton: BioD-like N-terminal domain of phosphotransacetylase
Locus tag: DMR_20020
Name: null
Funciton: L-lactate permease
Locus tag: DMR_20010
Name: lldG
Funciton: L-lactate dehydrogenase, hypothetical protein subunit LldG
Locus tag: DMR_20000
Name: lldEF
Funciton: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
por-glcD-glcF-DMR_20040-DVU3031-DMR_20020-lldG-lldEF -84 4.4 GATGGCACACGACTTGCGA DMR_20070
Desulfovibrio piger ATCC 29098
Position: -112
Score: 4.02453
Sequence: TTCGGAGCAGGTCTTGCTG
Locus tag: DESPIG_02393
Name: glcD
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
Locus tag: DESPIG_02394
Name: glcF
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
Locus tag: DESPIG_02395
Name: lldG
Funciton: L-lactate dehydrogenase, hypothetical protein subunit LldG
Locus tag: DESPIG_02396
Name: lldEF
Funciton: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
glcD-glcF-lldG-lldEF -112 4 TTCGGAGCAGGTCTTGCTG DESPIG_02393
Desulfovibrio vulgaris Hildenborough
Position: -153
Score: 4.76445
Sequence: ATTGGCACATTTCTTGTTA
Locus tag: DVU3025
Name: por
Funciton: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
Locus tag: DVU3026
Name: lldP
Funciton: L-lactate permease
Locus tag: DVU3027
Name: glcD
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
Locus tag: DVU3028
Name: glcF
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
Locus tag: DVU3029
Name: pta
Funciton: Phosphate acetyltransferase (EC 2.3.1.8)
Locus tag: DVU3030
Name: ackA
Funciton: Acetate kinase (EC 2.7.2.1)
Locus tag: DVU3031
Name: DVU3031
Funciton: BioD-like N-terminal domain of phosphotransacetylase
Locus tag: DVU3032
Name: lldG
Funciton: L-lactate dehydrogenase, hypothetical protein subunit LldG
Locus tag: DVU3033
Name: lldEF
Funciton: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
por-lldP-glcD-glcF-pta-ackA-DVU3031-lldG-lldEF -153 4.8 ATTGGCACATTTCTTGTTA DVU3025
Desulfovibrio vulgaris str. Miyazaki F
Position: -368
Score: 4.78836
Sequence: ACTGGCACACTTCTTGTTG
Locus tag: DvMF_1860
Name: por
Funciton: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
Locus tag: DvMF_1861
Name: lldP
Funciton: L-lactate permease
Locus tag: DvMF_1862
Name: glcD
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
Locus tag: DvMF_1863
Name: glcF
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
Locus tag: DvMF_1864
Name: pta
Funciton: Phosphate acetyltransferase (EC 2.3.1.8)
Locus tag: DvMF_1865
Name: ackA
Funciton: Acetate kinase (EC 2.7.2.1)
Locus tag: DvMF_1866
Name: DVU3031
Funciton: BioD-like N-terminal domain of phosphotransacetylase
Locus tag: DvMF_1867
Name: lldG
Funciton: L-lactate dehydrogenase, hypothetical protein subunit LldG
Locus tag: DvMF_1868
Name: lldEF
Funciton: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
por-lldP-glcD-glcF-pta-ackA-DVU3031-lldG-lldEF -368 4.8 ACTGGCACACTTCTTGTTG DvMF_1860
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