Orthologous regulated operons containing sycN gene

Properties
Regulog:	RpoN - Desulfovibrionales
Regulator type:	Transcription factor
Regulator family:	Sigma54
Regulation mode:
Biological process:	Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism
Effector:
Phylum:	Proteobacteria

Built upon 487 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Desulfovibrio piger ATCC 29098
Position: -73 Score: 4.487 Sequence: TGTGGCATGATTCTGGCAT Locus tag: DESPIG_00689 Name: null Funciton: Type III secretion outermembrane contact sensing protein (YopN,Yop4b,LcrE) / Type III secretion outermembrane negative regulator of secretion (TyeA) Locus tag: DESPIG_00688 Name: sycN Funciton: Type III secretion chaperone SycN Locus tag: DESPIG_00687 Name: null Funciton: hypothetical protein Locus tag: DESPIG_00686 Name: null Funciton: Chaperone protein YscY (Yop proteins translocation protein Y) Locus tag: DESPIG_00685 Name: sctV Funciton: Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV) Locus tag: DESPIG_00684 Name: invX Funciton: Type III secretion inner membrane protein (YscS,homologous to flagellar export components) Locus tag: DESPIG_00683 Name: escT Funciton: Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components) Locus tag: DESPIG_00682 Name: flhB Funciton: Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components) Locus tag: DESPIG_00681 Name: flrC Funciton: sigma54 specific transcriptional regulator, Fis family Locus tag: DESPIG_00680 Name: null Funciton: protein serine/threonine phosphatase
DESPIG_00689-sycN-DESPIG_00687-DESPIG_00686-sctV-invX-escT-flhB-flrC-DESPIG_00680	-73	4.5	TGTGGCATGATTCTGGCAT	DESPIG_00689
Desulfovibrio vulgaris Hildenborough
Position: -257 Score: 4.51052 Sequence: TCTGGCCCGCTTTTCGCAA Locus tag: DVUA0106 Name: null Funciton: Type III secretion outermembrane contact sensing protein (YopN,Yop4b,LcrE) / Type III secretion outermembrane negative regulator of secretion (TyeA) Locus tag: DVUA0105 Name: sycN Funciton: Type III secretion chaperone SycN Locus tag: DORF831 Name: DORF831 Funciton: hypothetical protein Locus tag: DVUA0104.1 Name: DVUA0104.1 Funciton: Chaperone protein YscY (Yop proteins translocation protein Y) Locus tag: DVUA0104 Name: sctV Funciton: Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV)
DVUA0106-sycN-DORF831-DVUA0104.1-sctV	-257	4.5	TCTGGCCCGCTTTTCGCAA	DVUA0106
Desulfovibrio vulgaris str. Miyazaki F
Position: -63 Score: 3.97852 Sequence: CATGGCGTGATTCTCGCAT Locus tag: DvMF_2419 Name: null Funciton: Type III secretion outermembrane contact sensing protein (YopN,Yop4b,LcrE) / Type III secretion outermembrane negative regulator of secretion (TyeA) Locus tag: DvMF_2418 Name: sycN Funciton: Type III secretion chaperone SycN Locus tag: DvMF_2417 Name: null Funciton: hypothetical protein Locus tag: DvMF_2416 Name: null Funciton: Chaperone protein YscY (Yop proteins translocation protein Y) Locus tag: DvMF_2415 Name: sctV Funciton: Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV) Locus tag: DvMF_2414 Name: invX Funciton: Type III secretion inner membrane protein (YscS,homologous to flagellar export components) Locus tag: DvMF_2413 Name: escT Funciton: Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components) Locus tag: DvMF_2412 Name: flhB Funciton: Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components)
DvMF_2419-sycN-DvMF_2417-DvMF_2416-sctV-invX-escT-flhB	-63	4	CATGGCGTGATTCTCGCAT	DvMF_2419