Regulon of RpoN in Desulfomicrobium baculatum DSM 4028

Properties
Regulator type:	Transcription factor
TF locus tag:	Dbac_0150
Regulator family:	Sigma54
Regulation mode:
Biological process:	Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism
Effector:
Regulog:	RpoN - Desulfovibrionales
Statistics of regulated genes:
- Genes	156
- Operons	57
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 487 sites [see more]

Member of regulog collections

By taxonomy - Desulfovibrionales
By TF family - Sigma54
By pathway - Zinc homeostasis
By pathway - Nitrogen metabolism
By pathway - Motility
By pathway - Metabolite transport
By pathway - Intercellular adhesion
By pathway - Cell wall metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -70 Score: 4.4 Sequence: GCTGGCCCGAAATCTGCTA Locus tag: Dbac_1772 Name: null Funciton: hypothetical protein
	Dbac_1772		hypothetical protein
Position: -49 Score: 4.3 Sequence: AATGGCACAATTCTTTCAT Locus tag: Dbac_2588 Name: null Funciton: type IV pilus assembly PilZ
	Dbac_2588		type IV pilus assembly PilZ
Position: -101 Score: 5.2 Sequence: GCTGGCATGGTCTTTGCCT Locus tag: Dbac_2264 Name: null Funciton: protein of unknown function DUF81 Locus tag: Dbac_2265 Name: null Funciton: hypothetical membrane protein Locus tag: Dbac_2266 Name: null Funciton: putative sigma54 specific transcriptional regulator Locus tag: Dbac_2267 Name: null Funciton: hypothetical protein Locus tag: Dbac_2268 Name: null Funciton: integral membrane sensor signal transduction histidine kinase Locus tag: Dbac_2269 Name: null Funciton: response regulator receiver protein Locus tag: Dbac_2270 Name: null Funciton: hypothetical protein Locus tag: Dbac_2271 Name: null Funciton: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Locus tag: Dbac_2272 Name: null Funciton: response regulator receiver sensor signal transduction histidine kinase Locus tag: Dbac_2273 Name: null Funciton: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
	Dbac_2264		protein of unknown function DUF81
	Dbac_2265		hypothetical membrane protein
	Dbac_2266		putative sigma54 specific transcriptional regulator
	Dbac_2267		hypothetical protein
	Dbac_2268		integral membrane sensor signal transduction histidine kinase
	Dbac_2269		response regulator receiver protein
	Dbac_2270		hypothetical protein
	Dbac_2271		Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
	Dbac_2272		response regulator receiver sensor signal transduction histidine kinase
	Dbac_2273		Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Position: -109 Score: 4.9 Sequence: GATGGCATGCATTCTGCTC Locus tag: Dbac_1588 Name: dtcP Funciton: TRAP-type C4-dicarboxylate transport system, periplasmic component Locus tag: Dbac_1589 Name: dctM Funciton: TRAP dicarboxylate transporter, DctM subunit Locus tag: Dbac_1590 Name: null Funciton: amidohydrolase family protein
	Dbac_1588	dtcP	TRAP-type C4-dicarboxylate transport system, periplasmic component
	Dbac_1589	dctM	TRAP dicarboxylate transporter, DctM subunit
	Dbac_1590		amidohydrolase family protein
Position: -156 Score: 4.3 Sequence: ATTGGCACAGAGAATGCTC Locus tag: Dbac_1587 Name: null Funciton: Pyruvate formate-lyase (EC 2.3.1.54) Locus tag: Dbac_1586 Name: null Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Locus tag: Dbac_1585 Name: null Funciton: PAS modulated sigma54 specific transcriptional regulator, Fis family
	Dbac_1587		Pyruvate formate-lyase (EC 2.3.1.54)
	Dbac_1586		Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
	Dbac_1585		PAS modulated sigma54 specific transcriptional regulator, Fis family
Position: -73 Score: 4.2 Sequence: GGTGGCATCAAAGTTGCTA Locus tag: Dbac_3025 Name: null Funciton: TPR repeat-containing protein
	Dbac_3025		TPR repeat-containing protein
Position: -55 Score: 5 Sequence: CATGGCACGCGCCTTGTTT Locus tag: Dbac_2669 Name: null Funciton: hypothetical protein Locus tag: Dbac_2670 Name: null Funciton: hypothetical protein Locus tag: Dbac_2671 Name: null Funciton: Sulfate permease and related transporters (MFS superfamily) Locus tag: Dbac_2672 Name: null Funciton: hypothetical protein Locus tag: Dbac_2673 Name: null Funciton: TSUP family transporter
	Dbac_2669		hypothetical protein
	Dbac_2670		hypothetical protein
	Dbac_2671		Sulfate permease and related transporters (MFS superfamily)
	Dbac_2672		hypothetical protein
	Dbac_2673		TSUP family transporter
Position: -88 Score: 4.7 Sequence: TCTGGCCTCATTCTTGCCT Locus tag: Dbac_3326 Name: adh Funciton: alcohol dehydrogenase, iron-containing( EC:1.1.1.1 )
	Dbac_3326	adh	alcohol dehydrogenase, iron-containing( EC:1.1.1.1 )
Position: -282 Score: 5.3 Sequence: TTTGGAATGCTCCTTGCTT Locus tag: Dbac_2155 Name: null Funciton: Hydrolase, UxaA family Locus tag: Dbac_2156 Name: null Funciton: Altronate dehydratase
	Dbac_2155		Hydrolase, UxaA family
	Dbac_2156		Altronate dehydratase
Position: -113 Score: 5.2 Sequence: CTTGGAACGCTCTTTGCTC Locus tag: Dbac_2146 Name: null Funciton: 6-phosphogluconate dehydrogenase NAD-binding
	Dbac_2146		6-phosphogluconate dehydrogenase NAD-binding
Position: -149 Score: 4.4 Sequence: TATGGCACTAAATCTGCTT Locus tag: Dbac_0848 Name: hdrC Funciton: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1) Locus tag: Dbac_0849 Name: hdrB Funciton: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1) Locus tag: Dbac_0850 Name: hdrA Funciton: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1) Locus tag: Dbac_0851 Name: hdrD Funciton: CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1) Locus tag: Dbac_0852 Name: null Funciton: Coenzyme F420-reducing hydrogenase, beta subunit Locus tag: Dbac_0853 Name: null Funciton: heterodisulfide reductase, iron-sulfur binding subunit, putative Locus tag: Dbac_0854 Name: null Funciton: Heterodisulfide reductase, cytochrome reductase subunit Locus tag: Dbac_0855 Name: null Funciton: Rubrerythrin
	Dbac_0848	hdrC	CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1)
	Dbac_0849	hdrB	CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1)
	Dbac_0850	hdrA	CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1)
	Dbac_0851	hdrD	CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1)
	Dbac_0852		Coenzyme F420-reducing hydrogenase, beta subunit
	Dbac_0853		heterodisulfide reductase, iron-sulfur binding subunit, putative
	Dbac_0854		Heterodisulfide reductase, cytochrome reductase subunit
	Dbac_0855		Rubrerythrin
Position: -61 Score: 4.7 Sequence: ACTGGCATGATCTCTGCTC Locus tag: Dbac_1225 Name: pspA Funciton: Phage shock protein A Locus tag: Dbac_1224 Name: pspB Funciton: phage shock protein B Locus tag: Dbac_1223 Name: pspC Funciton: Phage shock protein C
	Dbac_1225	pspA	Phage shock protein A
	Dbac_1224	pspB	phage shock protein B
	Dbac_1223	pspC	Phage shock protein C
Position: -144 Score: 4.9 Sequence: CCTGGCACGCGCCTTGTAT Locus tag: Dbac_3471 Name: flhA Funciton: Flagellar biosynthesis pathway, component FlhA
	Dbac_3471	flhA	Flagellar biosynthesis pathway, component FlhA
Position: -84 Score: 4.9 Sequence: TGTGGCAGGTCTTTTGCTT Locus tag: Dbac_2656 Name: null Funciton: membrane protein, putative Locus tag: Dbac_2655 Name: null Funciton: hypothetical protein Locus tag: Dbac_2654 Name: null Funciton: PAS/PAC sensor signal transduction histidine kinase Locus tag: Dbac_2653 Name: null Funciton: Two component, sigma54 specific, transcriptional regulator, Fis family
	Dbac_2656		membrane protein, putative
	Dbac_2655		hypothetical protein
	Dbac_2654		PAS/PAC sensor signal transduction histidine kinase
	Dbac_2653		Two component, sigma54 specific, transcriptional regulator, Fis family
Position: -112 Score: 4.3 Sequence: TCAGGCAGGGTATTTGCTA Locus tag: Dbac_1016 Name: zraS Funciton: Sensor protein of sigma-54-dependent two-component system Locus tag: Dbac_1017 Name: zraR Funciton: Two component, sigma54 specific, transcriptional regulator, Fis family
	Dbac_1016	zraS	Sensor protein of sigma-54-dependent two-component system
	Dbac_1017	zraR	Two component, sigma54 specific, transcriptional regulator, Fis family
Position: -56 Score: 4.8 Sequence: TTTGGCACTGCCTGTGCTT Locus tag: Dbac_3049 Name: amt Funciton: Ammonium transporter Locus tag: Dbac_3050 Name: glnB Funciton: Nitrogen regulatory protein P-II
	Dbac_3049	amt	Ammonium transporter
	Dbac_3050	glnB	Nitrogen regulatory protein P-II
Position: -45 Score: 4.1 Sequence: ATGGGTACCAATCTTGCTT Locus tag: Dbac_0116 Name: null Funciton: UDP-N-acetylglucosamine pyrophosphorylase related protein
	Dbac_0116		UDP-N-acetylglucosamine pyrophosphorylase related protein
Position: -85 Score: 3.8 Sequence: TCTGGTCCGGGATGTGCAC Position: -44 Score: 4.8 Sequence: TTTGGCCCGCCTTTTGATC Locus tag: Dbac_2434 Name: fliK Funciton: Flagellar hook-length control protein FliK Locus tag: Dbac_2433 Name: flgD Funciton: Flagellar basal-body rod modification protein FlgD Locus tag: Dbac_2432 Name: flgE Funciton: Flagellar hook protein FlgE
	Dbac_2434	fliK	Flagellar hook-length control protein FliK
	Dbac_2433	flgD	Flagellar basal-body rod modification protein FlgD
	Dbac_2432	flgE	Flagellar hook protein FlgE
Position: -95 Score: 4.8 Sequence: CCTGGCCCGTTTTTTGCCA Locus tag: Dbac_3470 Name: flhF Funciton: Flagellar biosynthesis protein FlhF Locus tag: Dbac_3469 Name: fleN Funciton: Flagellar synthesis regulator FleN Locus tag: Dbac_3468 Name: fliA Funciton: RNA polymerase, sigma 28 subunit, FliA/WhiG Locus tag: Dbac_3467 Name: cheY Funciton: Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY Locus tag: Dbac_3466 Name: fliL Funciton: Flagellar biosynthesis protein FliL Locus tag: Dbac_3465 Name: null Funciton: hypothetical protein Locus tag: Dbac_3464 Name: null Funciton: hypothetical protein
	Dbac_3470	flhF	Flagellar biosynthesis protein FlhF
	Dbac_3469	fleN	Flagellar synthesis regulator FleN
	Dbac_3468	fliA	RNA polymerase, sigma 28 subunit, FliA/WhiG
	Dbac_3467	cheY	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY
	Dbac_3466	fliL	Flagellar biosynthesis protein FliL
	Dbac_3465		hypothetical protein
	Dbac_3464		hypothetical protein
Position: -106 Score: 4 Sequence: ACTGGTCGGGATTTTGCAA Locus tag: Dbac_2404 Name: DVU0518 Funciton: FlgN family protein Locus tag: Dbac_2403 Name: flgK Funciton: flagellar hook-associated protein FlgK Locus tag: Dbac_2402 Name: flgL Funciton: Flagellar hook-associated protein FlgL Locus tag: Dbac_2401 Name: csrA Funciton: carbon storage regulator, CsrA Locus tag: Dbac_2400 Name: fliW Funciton: Flagellar assembly factor FliW
	Dbac_2404	DVU0518	FlgN family protein
	Dbac_2403	flgK	flagellar hook-associated protein FlgK
	Dbac_2402	flgL	Flagellar hook-associated protein FlgL
	Dbac_2401	csrA	carbon storage regulator, CsrA
	Dbac_2400	fliW	Flagellar assembly factor FliW
Position: -311 Score: 3.9 Sequence: CCGGGCATTGAACTTGCTC Locus tag: Dbac_2224 Name: null Funciton: PEP-CTERM system TPR-repeat lipoprotein Locus tag: Dbac_2223 Name: null Funciton: Exopolysaccharide production protein Pss (pss) Locus tag: Dbac_2222 Name: null Funciton: polysaccharide export protein, PEP-CTERM sytem-associated Locus tag: Dbac_2221 Name: null Funciton: Lipopolysaccharide biosynthesis chain length determinant protein Locus tag: Dbac_2220 Name: null Funciton: Protein-tyrosine kinase (EC 2.7.1.112) Locus tag: Dbac_2219 Name: exeA Funciton: Secretion ATPase, PEP-CTERM locus subfamily
	Dbac_2224		PEP-CTERM system TPR-repeat lipoprotein
	Dbac_2223		Exopolysaccharide production protein Pss (pss)
	Dbac_2222		polysaccharide export protein, PEP-CTERM sytem-associated
	Dbac_2221		Lipopolysaccharide biosynthesis chain length determinant protein
	Dbac_2220		Protein-tyrosine kinase (EC 2.7.1.112)
	Dbac_2219	exeA	Secretion ATPase, PEP-CTERM locus subfamily
Position: -44 Score: 4.8 Sequence: TCTGGCATGGGATCTGCTT Locus tag: Dbac_0547 Name: null Funciton: hypothetical protein
	Dbac_0547		hypothetical protein
Position: -57 Score: 4.2 Sequence: CGTGGCATCGACCATGCAA Locus tag: Dbac_0833 Name: nifV Funciton: Pyruvate carboxyltransferase
	Dbac_0833	nifV	Pyruvate carboxyltransferase
Position: -53 Score: 5 Sequence: GCTGGCACGCATCCTGCCT Locus tag: Dbac_1728 Name: lldG Funciton: L-lactate dehydrogenase, hypothetical protein subunit LldG Locus tag: Dbac_1729 Name: lldEF Funciton: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
	Dbac_1728	lldG	L-lactate dehydrogenase, hypothetical protein subunit LldG
	Dbac_1729	lldEF	L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
Position: -91 Score: 4.3 Sequence: AGTGGCACAAAACTTGTTT Locus tag: Dbac_1044 Name: por Funciton: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) Locus tag: Dbac_1045 Name: lldP Funciton: L-lactate permease Locus tag: Dbac_1046 Name: glcD Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Locus tag: Dbac_1047 Name: glcF Funciton: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF Locus tag: Dbac_1048 Name: pta Funciton: Phosphate acetyltransferase (EC 2.3.1.8) Locus tag: Dbac_1049 Name: ackA Funciton: Acetate kinase (EC 2.7.2.1)
	Dbac_1044	por	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
	Dbac_1045	lldP	L-lactate permease
	Dbac_1046	glcD	Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
	Dbac_1047	glcF	Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
	Dbac_1048	pta	Phosphate acetyltransferase (EC 2.3.1.8)
	Dbac_1049	ackA	Acetate kinase (EC 2.7.2.1)
Position: -63 Score: 4.8 Sequence: TCTGGCACGGCACTTGATA Locus tag: Dbac_1014 Name: zraP Funciton: Zinc resistance-associated protein
	Dbac_1014	zraP	Zinc resistance-associated protein
Position: -89 Score: 4.4 Sequence: TGTGGCATCTGAATTGCTT Locus tag: Dbac_1496 Name: glnN Funciton: Glutamine synthetase type III, GlnN (EC 6.3.1.2)
	Dbac_1496	glnN	Glutamine synthetase type III, GlnN (EC 6.3.1.2)
Position: -29 Score: 4.4 Sequence: TCTGGCATGAAGTTTGATA Locus tag: Dbac_2789 Name: lpxC Funciton: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.-)
	Dbac_2789	lpxC	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.-)
Position: -64 Score: 4.7 Sequence: TCTGGCACCAGGTTTGCTC Locus tag: Dbac_2386 Name: fliD Funciton: Flagellar hook-associated protein FliD Locus tag: Dbac_2387 Name: fliS Funciton: Flagellin-specific chaperone FliS
	Dbac_2386	fliD	Flagellar hook-associated protein FliD
	Dbac_2387	fliS	Flagellin-specific chaperone FliS
Position: -115 Score: 4.6 Sequence: GCTGGTACGTTCGTTGCTA Locus tag: Dbac_2236 Name: null Funciton: type IV pilus assembly PilZ
	Dbac_2236		type IV pilus assembly PilZ
Position: -84 Score: 5 Sequence: TATGGCATGCCATCTGCTT Locus tag: Dbac_2145 Name: null Funciton: Formate C-acetyltransferase Locus tag: Dbac_2144 Name: null Funciton: glycyl-radical enzyme activating protein family Locus tag: Dbac_2143 Name: null Funciton: PAS modulated sigma54 specific transcriptional regulator, Fis family
	Dbac_2145		Formate C-acetyltransferase
	Dbac_2144		glycyl-radical enzyme activating protein family
	Dbac_2143		PAS modulated sigma54 specific transcriptional regulator, Fis family
Position: -84 Score: 4.5 Sequence: CCCGGCATATATTTTGCTA Locus tag: Dbac_1753 Name: null Funciton: type IV pilus assembly PilZ
	Dbac_1753		type IV pilus assembly PilZ
Position: -29 Score: 4.7 Sequence: TGCGGCATCCTTGTTGCTT Locus tag: Dbac_0594 Name: nifA-2 Funciton: transcriptional regulator, NifA subfamily, Fis Family
	Dbac_0594	nifA-2	transcriptional regulator, NifA subfamily, Fis Family
Position: -64 Score: 3.8 Sequence: CAAGGCCCGCAAACTGCTC Locus tag: Dbac_2385 Name: fliC Funciton: flagellin domain protein
	Dbac_2385	fliC	flagellin domain protein
Position: -62 Score: 4.4 Sequence: CTTGGCAACAAACTTGCTA Locus tag: Dbac_1721 Name: null Funciton: GGDEF domain protein
	Dbac_1721		GGDEF domain protein
Position: -62 Score: 5.3 Sequence: CCTGGCACGGCCCTTGCCT Locus tag: Dbac_2944 Name: null Funciton: hypothetical protein
	Dbac_2944		hypothetical protein
Position: -45 Score: 5.2 Sequence: TATGGCACCGTCCTTGCTC Locus tag: Dbac_3048 Name: null Funciton: ammonium transporter Locus tag: Dbac_3047 Name: null Funciton: nitrogen regulatory protein P-II Locus tag: Dbac_3046 Name: null Funciton: UTP-GlnB uridylyltransferase, GlnD
	Dbac_3048		ammonium transporter
	Dbac_3047		nitrogen regulatory protein P-II
	Dbac_3046		UTP-GlnB uridylyltransferase, GlnD
Position: -65 Score: 5 Sequence: ATTGGCATGGACCATGCTT Locus tag: Dbac_2231 Name: null Funciton: protein of unknown function DUF1555
	Dbac_2231		protein of unknown function DUF1555
Position: -63 Score: 5 Sequence: TTTGGCACGGTCGATGCAT Locus tag: Dbac_2235 Name: null Funciton: protein of unknown function DUF1555
	Dbac_2235		protein of unknown function DUF1555
Position: -84 Score: 4.1 Sequence: CATGGACCCATTCCTGCAT Locus tag: Dbac_1614 Name: flgE Funciton: Flagellar hook protein FlgE
	Dbac_1614	flgE	Flagellar hook protein FlgE
Position: -67 Score: 4.4 Sequence: GCTGGCATGAATGTTGATT Locus tag: Dbac_0691 Name: null Funciton: hypothetical protein Locus tag: Dbac_0692 Name: null Funciton: hypothetical protein
	Dbac_0691		hypothetical protein
	Dbac_0692		hypothetical protein
Position: -40 Score: 4.4 Sequence: GTTGGCATGAATCTGGCTC Locus tag: Dbac_2976 Name: null Funciton: OmpA/MotB domain protein Locus tag: Dbac_2975 Name: null Funciton: MotA/TolQ/ExbB proton channel
	Dbac_2976		OmpA/MotB domain protein
	Dbac_2975		MotA/TolQ/ExbB proton channel
Position: -53 Score: 4.1 Sequence: AATGGCATTCTGTGTGCAA Locus tag: Dbac_2430 Name: flaB1 Funciton: Flagellin (flaB1)
	Dbac_2430	flaB1	Flagellin (flaB1)
Position: -81 Score: 5.1 Sequence: TTTGGCACGCCCGTTGCCC Locus tag: Dbac_0834 Name: nifH Funciton: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH Locus tag: Dbac_0835 Name: glnB-3 Funciton: Nitrogen regulatory protein P-II Locus tag: Dbac_0836 Name: glnB-2 Funciton: Nitrogen regulatory protein P-II Locus tag: Dbac_0837 Name: nifD Funciton: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) Locus tag: Dbac_0838 Name: nifK Funciton: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) Locus tag: Dbac_0839 Name: DvMF_2618 Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB Locus tag: Dbac_0840 Name: null Funciton: Ferredoxin, 2Fe-2S Locus tag: Dbac_0841 Name: nifE Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE Locus tag: Dbac_0842 Name: nifN Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN Locus tag: Dbac_0843 Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
	Dbac_0834	nifH	Nitrogenase (molybdenum-iron) reductase and maturation protein NifH
	Dbac_0835	glnB-3	Nitrogen regulatory protein P-II
	Dbac_0836	glnB-2	Nitrogen regulatory protein P-II
	Dbac_0837	nifD	Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)
	Dbac_0838	nifK	Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)
	Dbac_0839	DvMF_2618	Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
	Dbac_0840		Ferredoxin, 2Fe-2S
	Dbac_0841	nifE	Nitrogenase FeMo-cofactor scaffold and assembly protein NifE
	Dbac_0842	nifN	Nitrogenase FeMo-cofactor scaffold and assembly protein NifN
	Dbac_0843	nifB	Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
Position: -67 Score: 4.4 Sequence: TGTGGTAAGCTTTTTGCCA Locus tag: Dbac_3071 Name: ald Funciton: Alanine dehydrogenase (EC 1.4.1.1)
	Dbac_3071	ald	Alanine dehydrogenase (EC 1.4.1.1)
Position: -85 Score: 4.9 Sequence: GTTGGCATGTGCGTTGCTT Locus tag: Dbac_0313 Name: null Funciton: response regulator receiver protein Locus tag: Dbac_0314 Name: null Funciton: response regulator receiver protein Locus tag: Dbac_0315 Name: null Funciton: hypothetical membrane protein Locus tag: Dbac_0316 Name: null Funciton: hypothetical membrane protein
	Dbac_0313		response regulator receiver protein
	Dbac_0314		response regulator receiver protein
	Dbac_0315		hypothetical membrane protein
	Dbac_0316		hypothetical membrane protein
Position: -96 Score: 5 Sequence: CATGGCACCGCATTTGCTT Locus tag: Dbac_0448 Name: null Funciton: Protein of unknown function CGGC region Locus tag: Dbac_0447 Name: null Funciton: nitrogen-fixing NifU-like N-terminal domain protein
	Dbac_0448		Protein of unknown function CGGC region
	Dbac_0447		nitrogen-fixing NifU-like N-terminal domain protein
Position: -43 Score: 4.7 Sequence: GGCGGCACGGCTCATGCTT Locus tag: Dbac_2301 Name: null Funciton: hypothetical protein Locus tag: Dbac_2300 Name: mrp Funciton: Cytosolic Fe-S cluster assembling factor NBP35
	Dbac_2301		hypothetical protein
	Dbac_2300	mrp	Cytosolic Fe-S cluster assembling factor NBP35
Position: -46 Score: 4.6 Sequence: CTTGGTATCTATCTTGCTT Locus tag: Dbac_0245 Name: null Funciton: lipoprotein, putative
	Dbac_0245		lipoprotein, putative
Position: -46 Score: 4.8 Sequence: ACTGGCCTGGTATTTGCTC Locus tag: Dbac_2410 Name: flgF Funciton: Flagellar basal-body rod protein FlgF Locus tag: Dbac_2409 Name: flgG Funciton: Flagellar basal-body rod protein FlgG Locus tag: Dbac_2408 Name: flgA Funciton: Flagellar basal-body P-ring formation protein FlgA Locus tag: Dbac_2407 Name: flgH Funciton: Flagellar L-ring protein FlgH Locus tag: Dbac_2406 Name: flgI Funciton: Flagellar P-ring protein FlgI Locus tag: Dbac_2405 Name: flgJ Funciton: Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-)
	Dbac_2410	flgF	Flagellar basal-body rod protein FlgF
	Dbac_2409	flgG	Flagellar basal-body rod protein FlgG
	Dbac_2408	flgA	Flagellar basal-body P-ring formation protein FlgA
	Dbac_2407	flgH	Flagellar L-ring protein FlgH
	Dbac_2406	flgI	Flagellar P-ring protein FlgI
	Dbac_2405	flgJ	Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-)
Position: -30 Score: 4.7 Sequence: TCTGGTCCGCGTTTTGCTG Locus tag: Dbac_3473 Name: fliR Funciton: Flagellar biosynthesis protein FliR Locus tag: Dbac_3472 Name: flhB Funciton: Flagellar biosynthesis protein FlhB Locus tag: Dbac_3471 Name: flhA Funciton: Flagellar biosynthesis protein FlhA
	Dbac_3473	fliR	Flagellar biosynthesis protein FliR
	Dbac_3472	flhB	Flagellar biosynthesis protein FlhB
	Dbac_3471	flhA	Flagellar biosynthesis protein FlhA
Position: -62 Score: 3.7 Sequence: ATTGGGCAGGCGGTTGCTT Locus tag: Dbac_0370 Name: null Funciton: putative dTDP-glucose 4,6-dehydratase Locus tag: Dbac_0369 Name: null Funciton: DegT/DnrJ/EryC1/StrS aminotransferase Locus tag: Dbac_0368 Name: null Funciton: UDP-N-acetylglucosamine 2-epimerase Locus tag: Dbac_0367 Name: null Funciton: N-acetylneuraminate synthase Locus tag: Dbac_0366 Name: null Funciton: acetyltransferase Locus tag: Dbac_0365 Name: null Funciton: nucleotidyl transferase domain protein
	Dbac_0370		putative dTDP-glucose 4,6-dehydratase
	Dbac_0369		DegT/DnrJ/EryC1/StrS aminotransferase
	Dbac_0368		UDP-N-acetylglucosamine 2-epimerase
	Dbac_0367		N-acetylneuraminate synthase
	Dbac_0366		acetyltransferase
	Dbac_0365		nucleotidyl transferase domain protein
Position: -91 Score: 4.7 Sequence: TCTGGAATGGTCATTGCAA Locus tag: Dbac_3026 Name: flgB Funciton: Flagellar basal-body rod protein FlgB Locus tag: Dbac_3027 Name: flgC Funciton: Flagellar basal-body rod protein FlgC Locus tag: Dbac_3028 Name: fliE Funciton: Flagellar hook-basal body complex protein FliE Locus tag: Dbac_3029 Name: fliF Funciton: Flagellar M-ring protein FliF Locus tag: Dbac_3030 Name: fliG Funciton: Flagellar motor switch protein FliG Locus tag: Dbac_3031 Name: fliH Funciton: Flagellar assembly protein FliH Locus tag: Dbac_3032 Name: fliI Funciton: flagellar protein export ATPase FliI
	Dbac_3026	flgB	Flagellar basal-body rod protein FlgB
	Dbac_3027	flgC	Flagellar basal-body rod protein FlgC
	Dbac_3028	fliE	Flagellar hook-basal body complex protein FliE
	Dbac_3029	fliF	Flagellar M-ring protein FliF
	Dbac_3030	fliG	Flagellar motor switch protein FliG
	Dbac_3031	fliH	Flagellar assembly protein FliH
	Dbac_3032	fliI	flagellar protein export ATPase FliI
Position: -29 Score: 4.5 Sequence: TTGTGCACGCTTTTTGCTA Locus tag: Dbac_2249 Name: fliJ Funciton: Flagellar biosynthesis chaperone FliJ Locus tag: Dbac_2250 Name: flbB Funciton: Flagellar protein FlbB Locus tag: Dbac_2251 Name: truA Funciton: tRNA pseudouridine synthase A (EC 4.2.1.70) Locus tag: Dbac_2252 Name: null Funciton: Flagellin, putative
	Dbac_2249	fliJ	Flagellar biosynthesis chaperone FliJ
	Dbac_2250	flbB	Flagellar protein FlbB
	Dbac_2251	truA	tRNA pseudouridine synthase A (EC 4.2.1.70)
	Dbac_2252		Flagellin, putative
Position: -47 Score: 5 Sequence: CTTGGCAGGGACTTTGCTT Locus tag: Dbac_2476 Name: null Funciton: hypothetical protein
	Dbac_2476		hypothetical protein
Position: -81 Score: 5 Sequence: ATTGGCACGGCGTCTGCTA Locus tag: Dbac_2711 Name: zraP Funciton: Zinc resistance-associated protein Locus tag: Dbac_2712 Name: null Funciton: PAS/PAC sensor signal transduction histidine kinase Locus tag: Dbac_2713 Name: null Funciton: two component, sigma54 specific, transcriptional regulator, Fis family
	Dbac_2711	zraP	Zinc resistance-associated protein
	Dbac_2712		PAS/PAC sensor signal transduction histidine kinase
	Dbac_2713		two component, sigma54 specific, transcriptional regulator, Fis family
Position: -45 Score: 4.1 Sequence: ATGGGTACCAATCTTGCTT Locus tag: Dbac_0116 Name: null Funciton: UDP-N-acetylglucosamine pyrophosphorylase related protein
	Dbac_0116		UDP-N-acetylglucosamine pyrophosphorylase related protein

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of RpoN in Desulfomicrobium baculatum DSM 4028

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --