Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing frdB gene

Properties
Regulog: RpoN - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Sigma54
Regulation mode:
Biological process: Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism
Effector:
Phylum: Proteobacteria
Built upon 487 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Desulfovibrio desulfuricans G20
Position: -159
Score: 4.86688
Sequence: ACTGGCACGGCATATGCTT
Locus tag: Dde_1258
Name: frdC
Funciton: Fumarate reductase cytochrome b subunit
Locus tag: Dde_1257
Name: frdA
Funciton: Fumarate reductase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Dde_1256
Name: frdB
Funciton: Fumarate reductase iron-sulfur subunit
Locus tag: Dde_1255
Name: fumA
Funciton: Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit A
Locus tag: Dde_1254
Name: ttdB
Funciton: Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit B
Locus tag: Dde_1253
Name: sfcA
Funciton: Malate dehydrogenase (oxaloacetate- decarboxylating) (NADP(+))
frdC-frdA-frdB-fumA-ttdB-sfcA -159 4.9 ACTGGCACGGCATATGCTT Dde_1258
Desulfovibrio magneticus RS-1
Position: -209
Score: 4.75283
Sequence: CCTGGCATCGTCCCTGCTA
Locus tag: DMR_05720
Name: dcu
Funciton: anaerobic C4-dicarboxylate transporter
Locus tag: DMR_05730
Name: fumA
Funciton: Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit A
Locus tag: DMR_05740
Name: ttdB
Funciton: Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit B
Locus tag: DMR_05750
Name: dctA
Funciton: C4-dicarboxylic acid transport protein
Locus tag: DMR_05760
Name: frdC
Funciton: Fumarate reductase cytochrome b subunit
Locus tag: DMR_05770
Name: frdA
Funciton: Fumarate reductase flavoprotein subunit (EC 1.3.99.1)
Locus tag: DMR_05780
Name: frdB
Funciton: Fumarate reductase iron-sulfur subunit
dcu-fumA-ttdB-dctA-frdC-frdA-frdB -209 4.8 CCTGGCATCGTCCCTGCTA DMR_05720