Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing cpaC gene

Properties
Regulog: RpoN - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Sigma54
Regulation mode:
Biological process: Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism
Effector:
Phylum: Proteobacteria
Built upon 487 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Desulfovibrio desulfuricans G20
Position: -82
Score: 5.05054
Sequence: CTTGGCACGGTGGTTGCCT
Locus tag: Dde_2357
Name: null
Funciton: Flp/Fap pilin component family protein
Locus tag: Dde_2358
Name: cpaA
Funciton: Type IV prepilin peptidase TadV/CpaA
Locus tag: Dde_2359
Name: cpaB
Funciton: Flp pilus assembly protein CpaB
Locus tag: Dde_2360
Name: cpaC
Funciton: Pilus assembly protein CpaC (cpaC)
Locus tag: Dde_2361
Name: null
Funciton: hypothetical protein
Locus tag: Dde_2362
Name: null
Funciton: Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly
Locus tag: Dde_2363
Name: cpaF
Funciton: Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily
Locus tag: Dde_2364
Name: null
Funciton: Flp pilus assembly protein TadB
Locus tag: Dde_2365
Name: null
Funciton: Type II/IV secretion system protein TadC, associated with Flp pilus assembly
Locus tag: Dde_2366
Name: null
Funciton: Flp pilus assembly protein TadD, contains TPR repeat
Locus tag: Dde_2367
Name: null
Funciton: hypothetical protein
Locus tag: Dde_2368
Name: null
Funciton: Von Willebrand factor type A domain protein, associated with Flp pilus assembly
Locus tag: Dde_2369
Name: null
Funciton: Similar to TadZ/CpaE, associated with Flp pilus assembly
Locus tag: Dde_2370
Name: null
Funciton: PAS/PAC sensor hybrid histidine kinase
Dde_2357-cpaA-cpaB-cpaC-Dde_2361-Dde_2362-cpaF-Dde_2364-Dde_2365-Dde_2366-Dde_2367-Dde_2368-Dde_2369-Dde_2370 -82 5.1 CTTGGCACGGTGGTTGCCT Dde_2357
Desulfovibrio magneticus RS-1
Position: -246
Score: 5.09072
Sequence: CTTGGCAGGCTTCTTGCTC
Locus tag: DMR_33860
Name: cpaB
Funciton: Flp pilus assembly protein CpaB
Locus tag: DMR_33850
Name: cpaC
Funciton: Pilus assembly protein CpaC (cpaC)
Locus tag: DMR_33840
Name: null
Funciton: hypothetical protein
Locus tag: DMR_33830
Name: null
Funciton: Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly
Locus tag: DMR_33820
Name: cpaF
Funciton: Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily
Locus tag: DMR_33810
Name: null
Funciton: Flp pilus assembly protein TadB
Locus tag: DMR_33800
Name: null
Funciton: Type II/IV secretion system protein TadC, associated with Flp pilus assembly
cpaB-cpaC-DMR_33840-DMR_33830-cpaF-DMR_33810-DMR_33800 -246 5.1 CTTGGCAGGCTTCTTGCTC DMR_33860
Desulfovibrio vulgaris Hildenborough
Position: -78
Score: 4.73121
Sequence: TTTGGCATGAGGGTTGCTC
Locus tag: DORF39640
Name: DORF39640
Funciton: Flp pilus assembly protein, pilin Flp
Locus tag: DVU2116
Name: null
Funciton: Flp pilus assembly protein, pilin Flp
Locus tag: DVU2117
Name: null
Funciton: Type IV prepilin peptidase TadV/CpaA
Locus tag: DVU2118
Name: null
Funciton: Flp pilus assembly protein RcpC/CpaB
Locus tag: DVU2119
Name: cpaC
Funciton: Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly
Locus tag: DVU2120
Name: null
Funciton: hypothetical protein
Locus tag: DVU2121
Name: null
Funciton: Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly
Locus tag: DVU2122
Name: cpaF
Funciton: Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily
Locus tag: DVU2123
Name: null
Funciton: Flp pilus assembly protein TadB
Locus tag: DVU2124
Name: null
Funciton: Type II/IV secretion system protein TadC, associated with Flp pilus assembly
Locus tag: DVU2125
Name: null
Funciton: Flp pilus assembly protein TadD, contains TPR repeat
Locus tag: DVU2126
Name: null
Funciton: hypothetical protein
Locus tag: DVU2127
Name: null
Funciton: Von Willebrand factor type A domain protein, associated with Flp pilus assembly
Locus tag: DVU2128
Name: null
Funciton: Similar to TadZ/CpaE, associated with Flp pilus assembly
Locus tag: DVU2129
Name: cckA
Funciton: sensory box histidine kinase/response regulator
DORF39640-DVU2116-DVU2117-DVU2118-cpaC-DVU2120-DVU2121-cpaF-DVU2123-DVU2124-DVU2125-DVU2126-DVU2127-DVU2128-cckA -78 4.7 TTTGGCATGAGGGTTGCTC DORF39640
Desulfovibrio vulgaris str. Miyazaki F
Position: -79
Score: 4.9376
Sequence: CTTGGCACGCGGGTTGCTG
Locus tag: DvMF_2747
Name: null
Funciton: Flp pilus assembly protein, pilin Flp
Locus tag: DvMF_2746
Name: null
Funciton: Flp pilus assembly protein, pilin Flp
Locus tag: DvMF_2745
Name: null
Funciton: Flp pilus assembly protein, pilin Flp
Locus tag: DvMF_2744
Name: null
Funciton: Flp pilus assembly protein, pilin Flp
Locus tag: DvMF_2743
Name: null
Funciton: Type IV prepilin peptidase TadV/CpaA
Locus tag: DvMF_2742
Name: null
Funciton: Flp pilus assembly protein RcpC/CpaB
Locus tag: DvMF_2741
Name: null
Funciton: Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly
Locus tag: DvMF_2740
Name: null
Funciton: hypothetical protein
Locus tag: DvMF_2739
Name: null
Funciton: Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly
Locus tag: DvMF_2738
Name: null
Funciton: type II/IV secretion system protein
Locus tag: DvMF_2737
Name: null
Funciton: Flp pilus assembly protein TadB
Locus tag: DvMF_2736
Name: null
Funciton: Type II/IV secretion system protein TadC, associated with Flp pilus assembly
Locus tag: DvMF_2735
Name: null
Funciton: Flp pilus assembly protein TadD, contains TPR repeat
Locus tag: DvMF_2734
Name: null
Funciton: hypothetical protein
Locus tag: DvMF_2733
Name: null
Funciton: Von Willebrand factor type A domain protein, associated with Flp pilus assembly
Locus tag: DvMF_2732
Name: null
Funciton: Similar to TadZ/CpaE, associated with Flp pilus assembly
Locus tag: DvMF_2731
Name: null
Funciton: multi-sensor hybrid histidine kinase
DvMF_2747-DvMF_2746-DvMF_2745-DvMF_2744-DvMF_2743-DvMF_2742-DvMF_2741-DvMF_2740-DvMF_2739-DvMF_2738-DvMF_2737-DvMF_2736-DvMF_2735-DvMF_2734-DvMF_2733-DvMF_2732-DvMF_2731 -79 4.9 CTTGGCACGCGGGTTGCTG DvMF_2747