Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing sctV gene

Properties
Regulog: RpoN - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Sigma54
Regulation mode:
Biological process: Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism
Effector:
Phylum: Proteobacteria
Built upon 487 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Desulfovibrio piger ATCC 29098
Position: -73
Score: 4.487
Sequence: TGTGGCATGATTCTGGCAT
Locus tag: DESPIG_00689
Name: null
Funciton: Type III secretion outermembrane contact sensing protein (YopN,Yop4b,LcrE) / Type III secretion outermembrane negative regulator of secretion (TyeA)
Locus tag: DESPIG_00688
Name: sycN
Funciton: Type III secretion chaperone SycN
Locus tag: DESPIG_00687
Name: null
Funciton: hypothetical protein
Locus tag: DESPIG_00686
Name: null
Funciton: Chaperone protein YscY (Yop proteins translocation protein Y)
Locus tag: DESPIG_00685
Name: sctV
Funciton: Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV)
Locus tag: DESPIG_00684
Name: invX
Funciton: Type III secretion inner membrane protein (YscS,homologous to flagellar export components)
Locus tag: DESPIG_00683
Name: escT
Funciton: Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components)
Locus tag: DESPIG_00682
Name: flhB
Funciton: Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components)
Locus tag: DESPIG_00681
Name: flrC
Funciton: sigma54 specific transcriptional regulator, Fis family
Locus tag: DESPIG_00680
Name: null
Funciton: protein serine/threonine phosphatase
DESPIG_00689-sycN-DESPIG_00687-DESPIG_00686-sctV-invX-escT-flhB-flrC-DESPIG_00680 -73 4.5 TGTGGCATGATTCTGGCAT DESPIG_00689
Desulfovibrio vulgaris Hildenborough
Position: -257
Score: 4.51052
Sequence: TCTGGCCCGCTTTTCGCAA
Locus tag: DVUA0106
Name: null
Funciton: Type III secretion outermembrane contact sensing protein (YopN,Yop4b,LcrE) / Type III secretion outermembrane negative regulator of secretion (TyeA)
Locus tag: DVUA0105
Name: sycN
Funciton: Type III secretion chaperone SycN
Locus tag: DORF831
Name: DORF831
Funciton: hypothetical protein
Locus tag: DVUA0104.1
Name: DVUA0104.1
Funciton: Chaperone protein YscY (Yop proteins translocation protein Y)
Locus tag: DVUA0104
Name: sctV
Funciton: Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV)
DVUA0106-sycN-DORF831-DVUA0104.1-sctV -257 4.5 TCTGGCCCGCTTTTCGCAA DVUA0106
Desulfovibrio vulgaris str. Miyazaki F
Position: -63
Score: 3.97852
Sequence: CATGGCGTGATTCTCGCAT
Locus tag: DvMF_2419
Name: null
Funciton: Type III secretion outermembrane contact sensing protein (YopN,Yop4b,LcrE) / Type III secretion outermembrane negative regulator of secretion (TyeA)
Locus tag: DvMF_2418
Name: sycN
Funciton: Type III secretion chaperone SycN
Locus tag: DvMF_2417
Name: null
Funciton: hypothetical protein
Locus tag: DvMF_2416
Name: null
Funciton: Chaperone protein YscY (Yop proteins translocation protein Y)
Locus tag: DvMF_2415
Name: sctV
Funciton: Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV)
Locus tag: DvMF_2414
Name: invX
Funciton: Type III secretion inner membrane protein (YscS,homologous to flagellar export components)
Locus tag: DvMF_2413
Name: escT
Funciton: Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components)
Locus tag: DvMF_2412
Name: flhB
Funciton: Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components)
DvMF_2419-sycN-DvMF_2417-DvMF_2416-sctV-invX-escT-flhB -63 4 CATGGCGTGATTCTCGCAT DvMF_2419