Orthologous regulated operons containing cpaF gene

Properties
Regulog:	RpoN - Desulfovibrionales
Regulator type:	Transcription factor
Regulator family:	Sigma54
Regulation mode:
Biological process:	Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism
Effector:
Phylum:	Proteobacteria

Built upon 487 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Desulfovibrio desulfuricans G20
Position: -82 Score: 5.05054 Sequence: CTTGGCACGGTGGTTGCCT Locus tag: Dde_2357 Name: null Funciton: Flp/Fap pilin component family protein Locus tag: Dde_2358 Name: cpaA Funciton: Type IV prepilin peptidase TadV/CpaA Locus tag: Dde_2359 Name: cpaB Funciton: Flp pilus assembly protein CpaB Locus tag: Dde_2360 Name: cpaC Funciton: Pilus assembly protein CpaC (cpaC) Locus tag: Dde_2361 Name: null Funciton: hypothetical protein Locus tag: Dde_2362 Name: null Funciton: Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly Locus tag: Dde_2363 Name: cpaF Funciton: Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily Locus tag: Dde_2364 Name: null Funciton: Flp pilus assembly protein TadB Locus tag: Dde_2365 Name: null Funciton: Type II/IV secretion system protein TadC, associated with Flp pilus assembly Locus tag: Dde_2366 Name: null Funciton: Flp pilus assembly protein TadD, contains TPR repeat Locus tag: Dde_2367 Name: null Funciton: hypothetical protein Locus tag: Dde_2368 Name: null Funciton: Von Willebrand factor type A domain protein, associated with Flp pilus assembly Locus tag: Dde_2369 Name: null Funciton: Similar to TadZ/CpaE, associated with Flp pilus assembly Locus tag: Dde_2370 Name: null Funciton: PAS/PAC sensor hybrid histidine kinase
Dde_2357-cpaA-cpaB-cpaC-Dde_2361-Dde_2362-cpaF-Dde_2364-Dde_2365-Dde_2366-Dde_2367-Dde_2368-Dde_2369-Dde_2370	-82	5.1	CTTGGCACGGTGGTTGCCT	Dde_2357
Desulfovibrio magneticus RS-1
Position: -246 Score: 5.09072 Sequence: CTTGGCAGGCTTCTTGCTC Locus tag: DMR_33860 Name: cpaB Funciton: Flp pilus assembly protein CpaB Locus tag: DMR_33850 Name: cpaC Funciton: Pilus assembly protein CpaC (cpaC) Locus tag: DMR_33840 Name: null Funciton: hypothetical protein Locus tag: DMR_33830 Name: null Funciton: Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly Locus tag: DMR_33820 Name: cpaF Funciton: Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily Locus tag: DMR_33810 Name: null Funciton: Flp pilus assembly protein TadB Locus tag: DMR_33800 Name: null Funciton: Type II/IV secretion system protein TadC, associated with Flp pilus assembly
cpaB-cpaC-DMR_33840-DMR_33830-cpaF-DMR_33810-DMR_33800	-246	5.1	CTTGGCAGGCTTCTTGCTC	DMR_33860
Desulfovibrio vulgaris Hildenborough
Position: -78 Score: 4.73121 Sequence: TTTGGCATGAGGGTTGCTC Locus tag: DORF39640 Name: DORF39640 Funciton: Flp pilus assembly protein, pilin Flp Locus tag: DVU2116 Name: null Funciton: Flp pilus assembly protein, pilin Flp Locus tag: DVU2117 Name: null Funciton: Type IV prepilin peptidase TadV/CpaA Locus tag: DVU2118 Name: null Funciton: Flp pilus assembly protein RcpC/CpaB Locus tag: DVU2119 Name: cpaC Funciton: Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly Locus tag: DVU2120 Name: null Funciton: hypothetical protein Locus tag: DVU2121 Name: null Funciton: Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly Locus tag: DVU2122 Name: cpaF Funciton: Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily Locus tag: DVU2123 Name: null Funciton: Flp pilus assembly protein TadB Locus tag: DVU2124 Name: null Funciton: Type II/IV secretion system protein TadC, associated with Flp pilus assembly Locus tag: DVU2125 Name: null Funciton: Flp pilus assembly protein TadD, contains TPR repeat Locus tag: DVU2126 Name: null Funciton: hypothetical protein Locus tag: DVU2127 Name: null Funciton: Von Willebrand factor type A domain protein, associated with Flp pilus assembly Locus tag: DVU2128 Name: null Funciton: Similar to TadZ/CpaE, associated with Flp pilus assembly Locus tag: DVU2129 Name: cckA Funciton: sensory box histidine kinase/response regulator
DORF39640-DVU2116-DVU2117-DVU2118-cpaC-DVU2120-DVU2121-cpaF-DVU2123-DVU2124-DVU2125-DVU2126-DVU2127-DVU2128-cckA	-78	4.7	TTTGGCATGAGGGTTGCTC	DORF39640
Desulfovibrio vulgaris str. Miyazaki F
Position: -79 Score: 4.9376 Sequence: CTTGGCACGCGGGTTGCTG Locus tag: DvMF_2747 Name: null Funciton: Flp pilus assembly protein, pilin Flp Locus tag: DvMF_2746 Name: null Funciton: Flp pilus assembly protein, pilin Flp Locus tag: DvMF_2745 Name: null Funciton: Flp pilus assembly protein, pilin Flp Locus tag: DvMF_2744 Name: null Funciton: Flp pilus assembly protein, pilin Flp Locus tag: DvMF_2743 Name: null Funciton: Type IV prepilin peptidase TadV/CpaA Locus tag: DvMF_2742 Name: null Funciton: Flp pilus assembly protein RcpC/CpaB Locus tag: DvMF_2741 Name: null Funciton: Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly Locus tag: DvMF_2740 Name: null Funciton: hypothetical protein Locus tag: DvMF_2739 Name: null Funciton: Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly Locus tag: DvMF_2738 Name: null Funciton: type II/IV secretion system protein Locus tag: DvMF_2737 Name: null Funciton: Flp pilus assembly protein TadB Locus tag: DvMF_2736 Name: null Funciton: Type II/IV secretion system protein TadC, associated with Flp pilus assembly Locus tag: DvMF_2735 Name: null Funciton: Flp pilus assembly protein TadD, contains TPR repeat Locus tag: DvMF_2734 Name: null Funciton: hypothetical protein Locus tag: DvMF_2733 Name: null Funciton: Von Willebrand factor type A domain protein, associated with Flp pilus assembly Locus tag: DvMF_2732 Name: null Funciton: Similar to TadZ/CpaE, associated with Flp pilus assembly Locus tag: DvMF_2731 Name: null Funciton: multi-sensor hybrid histidine kinase
DvMF_2747-DvMF_2746-DvMF_2745-DvMF_2744-DvMF_2743-DvMF_2742-DvMF_2741-DvMF_2740-DvMF_2739-DvMF_2738-DvMF_2737-DvMF_2736-DvMF_2735-DvMF_2734-DvMF_2733-DvMF_2732-DvMF_2731	-79	4.9	CTTGGCACGCGGGTTGCTG	DvMF_2747