Regulog CcmR - Cyanobacteria
| Regulator type: | Transcription factor |
| Regulator family: | LysR |
| Regulation mode: | repressor |
| Biological process: | Carbon dioxide fixation |
| Effector: | |
| Phylum: | Cyanobacteria |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Cyanobacteria
- By TF family - LysR
- By pathway - Carbon dioxide fixation
| Genome | Genes | Operons |
|---|---|---|
| Cyanothece sp. ATCC 51142 | 22 | 8 |
| Cyanothece sp. PCC 7425 | 15 | 4 |
| Cyanothece sp. PCC 8801 | 16 | 7 |
| Gloeobacter violaceus PCC 7421 | 10 | 3 |
| Microcystis aeruginosa NIES-843 | 14 | 5 |
| Nostoc sp. PCC 7120 | 6 | 4 |
| Prochlorococcus marinus str. MIT 9313 | ||
| Synechococcus elongatus PCC 7942 | 6 | 3 |
| Synechococcus sp. JA-3-3Ab | 5 | 2 |
| Synechococcus sp. PCC 7002 | 18 | 5 |
| Synechococcus sp. WH 8102 | ||
| Synechocystis sp. PCC 6803 | 31 | 8 |
| Thermosynechococcus elongatus BP-1 | 12 | 3 |
| Trichodesmium erythraeum IMS101 |
| Genes | Function | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||||
| ccmR |
*
Cyanothece sp. ATCC 51142 Site: position = -101 score = 4.83893 sequence = ATGGAAATAAGTCTAT Site: position = -133 score = 4.26511 sequence = ATAGATTTATTTCAAC Gene: cce_3731: Carbon assimilation transcriptional regulator, LysR family |
*
Cyanothece sp. PCC 7425 Site: position = -93 score = 5.85786 sequence = ATAGATTTTTGTCTAT Gene: Cyan7425_3855: Carbon assimilation transcriptional regulator, LysR family |
*
Cyanothece sp. PCC 8801 Site: position = -144 score = 4.36968 sequence = ATAGAATTTAATCAAA Site: position = -112 score = 4.84814 sequence = ATTGTATTTAATCTAT Gene: PCC8801_3406: Carbon assimilation transcriptional regulator, LysR family |
*
Gloeobacter violaceus PCC 7421 Site: position = -34 score = 5.19751 sequence = ATAGAACTATGTCTAT Gene: gll1001: Carbon assimilation transcriptional regulator, LysR family |
*2
Microcystis aeruginosa NIES-843 Site: position = -71 score = 4.89685 sequence = ATTGACTAGAATCTAT Gene: MAE_15110: Carbon assimilation transcriptional regulator, LysR family Site: position = -207 score = 4.88882 sequence = ATTGTTATAAATCTAT Site: position = -122 score = 4.93943 sequence = ATTGATTTAAACCTAT Site: position = -238 score = 4.33195 sequence = ATAGACAAAACTTTAT Gene: MAE_62070: Carbon assimilation transcriptional regulator, LysR family |
*
Nostoc sp. PCC 7120 Site: position = -146 score = 5.79201 sequence = ATAGATTTTTATCTAT Site: position = -72 score = 4.94318 sequence = CTAGTCTTATATCTAT Site: position = -285 score = 5.79201 sequence = ATAGATTTTTATCTAT Gene: all0862: Carbon assimilation transcriptional regulator, LysR family |
|
*
Synechococcus elongatus PCC 7942 Site: position = -34 score = 5.74728 sequence = ATAGACTTAAATCTAT Gene: Synpcc7942_1310: Carbon assimilation transcriptional regulator, LysR family |
Gene: CYA_1081: Carbon assimilation transcriptional regulator, LysR family |
*
Synechococcus sp. PCC 7002 Site: position = -63 score = 5.03591 sequence = ATTGACTCTAGTCTAT Gene: SYNPCC7002_A0171: Carbon assimilation transcriptional regulator, LysR family |
|
*2
Synechocystis sp. PCC 6803 Gene: sll0030: Carbon assimilation transcriptional regulator, LysR family Site: position = -179 score = 4.83565 sequence = ATAGCCATAGGTCTAT Site: position = -240 score = 4.72861 sequence = ATTGGCTTTATTCTAT Gene: sll1594: Carbon assimilation transcriptional regulator, LysR family |
*
Thermosynechococcus elongatus BP-1 Site: position = -42 score = 5.09796 sequence = ATAGAATTTCGTCTAT Gene: tlr2037: Carbon assimilation transcriptional regulator, LysR family |
|
Carbon assimilation transcriptional regulator, LysR family |
| ndhF3 |
*
Cyanothece sp. ATCC 51142 Site: position = -74 score = 5.52754 sequence = ATAGACTTAATTCTAT Gene: cce_0603: NADH dehydrogenase subunit F |
Gene: Cyan7425_4861: NADH dehydrogenase subunit F |
*
Cyanothece sp. PCC 8801 Site: position = -71 score = 5.5986 sequence = ATAGACTAAAGTCTAT Site: position = -8 score = 5.03594 sequence = ATTGTTATATGTCTAT Gene: PCC8801_4247: NADH dehydrogenase subunit F |
*
Gloeobacter violaceus PCC 7421 Site: position = -139 score = 4.95938 sequence = ATCTACTTTTATCTAT Gene: gvip132: NADH dehydrogenase subunit F |
Gene: MAE_15120: NADH dehydrogenase subunit F |
*
Nostoc sp. PCC 7120 Site: position = -245 score = 5.85786 sequence = ATAGATTTTTGTCTAT Gene: alr4156: NADH dehydrogenase subunit F |
|
Gene: Synpcc7942_2091: NADH dehydrogenase subunit F |
*
Synechococcus sp. JA-3-3Ab Site: position = -107 score = 5.03875 sequence = CTTGATTTTTGTCTAT Gene: CYA_0640: NADH dehydrogenase subunit F |
Gene: SYNPCC7002_A0172: NADH dehydrogenase subunit F |
|
*
Synechocystis sp. PCC 6803 Site: position = -204 score = 3.87446 sequence = ATTGTCGCTTGACTAT Gene: sll1732: NADH dehydrogenase subunit F |
Gene: null: NADH dehydrogenase subunit F |
|
NADH dehydrogenase subunit F |
| ndhD3 |
Gene: cce_0604: NADH dehydrogenase subunit D |
Gene: Cyan7425_4860: NADH dehydrogenase subunit D |
Gene: PCC8801_4249: NADH dehydrogenase subunit D |
Gene: gvip133: NADH dehydrogenase subunit D |
Gene: MAE_15140: NADH dehydrogenase subunit D |
Gene: alr4157: NADH dehydrogenase subunit D |
|
Gene: Synpcc7942_2092: NADH dehydrogenase subunit D |
Gene: CYA_0639: NADH dehydrogenase subunit D |
Gene: SYNPCC7002_A0173: NADH dehydrogenase subunit D |
|
Gene: sll1733: NADH dehydrogenase subunit D |
Gene: null: NADH dehydrogenase subunit D |
|
NADH dehydrogenase subunit D |
| cupA |
Gene: cce_0605: CO2 uptake protein |
Gene: Cyan7425_4859: CO2 uptake protein |
Gene: PCC8801_4250: CO2 uptake protein |
Gene: gvip134: CO2 uptake protein |
Gene: MAE_15160: CO2 uptake protein |
Gene: alr4158: CO2 uptake protein |
|
Gene: Synpcc7942_2093: CO2 uptake protein |
Gene: CYA_0638: CO2 uptake protein |
Gene: SYNPCC7002_A0174: CO2 uptake protein |
|
Gene: sll1734: CO2 uptake protein |
Gene: tlr0906: CO2 uptake protein |
|
CO2 uptake protein |
| cupS |
Gene: cce_1049: CO2 uptake transporter, small subunit |
Gene: Cyan7425_4858: CO2 uptake transporter, small subunit |
Gene: PCC8801_1006: CO2 uptake transporter, small subunit |
Gene: glr1006: CO2 uptake transporter, small subunit |
Gene: MAE_54040: CO2 uptake transporter, small subunit |
*
Nostoc sp. PCC 7120 Site: position = 34 score = 4.41159 sequence = ATAGTTTTAAAACTCT Gene: alr1320: CO2 uptake transporter, small subunit |
|
Gene: Synpcc7942_2094: CO2 uptake transporter, small subunit |
Gene: CYA_0636: CO2 uptake transporter, small subunit |
Gene: SYNPCC7002_A0175: CO2 uptake transporter, small subunit |
|
Gene: sll1735: CO2 uptake transporter, small subunit |
Gene: null: CO2 uptake transporter, small subunit |
|
CO2 uptake transporter, small subunit |
| ecaB2 |
Gene: cce_0871: Periplasmic carbonic anhydrase |
|
Gene: PCC8801_4248: Periplasmic carbonic anhydrase |
|
Gene: MAE_15130: Periplasmic carbonic anhydrase |
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Gene: slr0051: Periplasmic carbonic anhydrase |
|
|
Periplasmic carbonic anhydrase |
| CRON 2. | |||||||||||||||
| glpX |
*
Cyanothece sp. ATCC 51142 Site: position = -74 score = 5.00233 sequence = ATAGACTTTTGACTAA Gene: cce_3974: Fructose-1,6-bisphosphatase II |
Gene: Cyan7425_3502: Fructose-1,6-bisphosphatase II |
*
Cyanothece sp. PCC 8801 Site: position = -74 score = 5.00233 sequence = ATAGACTTTTGACTAA Gene: PCC8801_3646: Fructose-1,6-bisphosphatase II |
Gene: gvip460: Fructose-1,6-bisphosphatase II |
*
Microcystis aeruginosa NIES-843 Site: position = -71 score = 4.9222 sequence = ATAGACTTTTGACTGT Gene: MAE_30020: Fructose-1,6-bisphosphatase II |
Gene: alr1041: Fructose-1,6-bisphosphatase II |
Gene: PMT0568: Fructose-1,6-bisphosphatase II |
Gene: Synpcc7942_0505: Fructose-1,6-bisphosphatase II |
Gene: CYA_0542: Fructose-1,6-bisphosphatase II |
Gene: SYNPCC7002_A1301: Fructose-1,6-bisphosphatase II |
Gene: SYNW1116: Fructose-1,6-bisphosphatase II |
*
Synechocystis sp. PCC 6803 Site: position = -71 score = 5.55243 sequence = ATAGACTTTTGACTAT Gene: slr2094: Fructose-1,6-bisphosphatase II |
Gene: null: Fructose-1,6-bisphosphatase II |
Gene: Tery_0948: Fructose-1,6-bisphosphatase II |
Fructose-1,6-bisphosphatase II |
| CRON 3. | |||||||||||||||
| bicA |
*2
Cyanothece sp. ATCC 51142 Site: position = -200 score = 5.04476 sequence = ATAGAATCTAGTCTAT Site: position = -232 score = 4.4809 sequence = ATAGTAATTAGCCTAT Gene: cce_1689: Bicarbonate transporter Gene: cce_3483: Bicarbonate transporter |
Gene: Cyan7425_1867: Bicarbonate transporter |
|
|
|
|
|
|
|
*
Synechococcus sp. PCC 7002 Site: position = -123 score = 5.16858 sequence = ATAGATATTAAACTAT Gene: SYNPCC7002_A2371: Bicarbonate transporter |
Gene: SYNW1524: Bicarbonate transporter |
*
Synechocystis sp. PCC 6803 Site: position = -45 score = 5.26516 sequence = ATAGACTAAAGACTAT Site: position = -76 score = 4.43762 sequence = CTAGAATATTCTCTAT Gene: sll0834: Bicarbonate transporter |
|
|
Bicarbonate transporter |
| nhaS |
Gene: cce_1688: Predicted sodium/hydrogen exchanger |
Gene: Cyan7425_1868: Predicted sodium/hydrogen exchanger |
|
|
Gene: MAE_62110: Predicted sodium/hydrogen exchanger |
Gene: all1303: Predicted sodium/hydrogen exchanger |
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Gene: SYNPCC7002_A2372: Predicted sodium/hydrogen exchanger |
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|
|
Predicted sodium/hydrogen exchanger |
| mnhC |
Gene: cce_1686: Na/H antiporter, subunit C |
*
Cyanothece sp. PCC 7425 Site: position = -121 score = 4.67842 sequence = ATTTATAAATATCTAT Gene: Cyan7425_3542: Na/H antiporter, subunit C |
*
Cyanothece sp. PCC 8801 Site: position = -24 score = 4.74403 sequence = ATAGTTTTTTGTATAT Site: position = -56 score = 4.82552 sequence = ATAGGCTTTAAGCTAT Gene: PCC8801_2762: Na/H antiporter, subunit C |
|
2
Microcystis aeruginosa NIES-843 Gene: MAE_23780: Na/H antiporter, subunit C Gene: MAE_23760: Na/H antiporter, subunit C |
Gene: all1843: Na/H antiporter, subunit C |
|
Gene: Synpcc7942_1474: Na/H antiporter, subunit C |
Gene: CYA_1756: Na/H antiporter, subunit C |
Gene: SYNPCC7002_A2373: Na/H antiporter, subunit C |
|
*3
Synechocystis sp. PCC 6803 Gene: slr2008: Na/H antiporter, subunit C Gene: slr2008: Na/H antiporter, subunit C Site: position = -125 score = 3.80851 sequence = ATAGAATCTATGCAAT Gene: slr2006: Na/H antiporter, subunit C |
*
Thermosynechococcus elongatus BP-1 Site: position = -193 score = 4.44611 sequence = ATTGACATTGATCTAA Site: position = -219 score = 5.0183 sequence = ATTGATAAAAATCTAT Gene: tll1818: Na/H antiporter, subunit C |
Gene: Tery_1614: Na/H antiporter, subunit C |
Na/H antiporter, subunit C |
| mnhD |
*2
Cyanothece sp. ATCC 51142 Gene: cce_1685: Na/H antiporter, subunit D Site: position = -180 score = 5.09829 sequence = ATTGATTTTAGGCTAT Gene: cce_2494: Na/H antiporter, subunit D |
Gene: Cyan7425_3543: Na/H antiporter, subunit D |
Gene: PCC8801_2761: Na/H antiporter, subunit D |
|
3
Microcystis aeruginosa NIES-843 Gene: MAE_23790: Na/H antiporter, subunit D Gene: MAE_23770: Na/H antiporter, subunit D Gene: MAE_23750: Na/H antiporter, subunit D |
Gene: all1842: Na/H antiporter, subunit D |
|
Gene: Synpcc7942_1473: Na/H antiporter, subunit D |
Gene: CYA_1755: Na/H antiporter, subunit D |
2
Synechococcus sp. PCC 7002 Gene: SYNPCC7002_A2374: Na/H antiporter, subunit D Gene: SYNPCC7002_A2375: Na/H antiporter, subunit D |
|
*4
Synechocystis sp. PCC 6803 Gene: slr2009: Na/H antiporter, subunit D Site: position = -107 score = 4.31129 sequence = ATTGTGATTGGTCTAT Gene: slr2007: Na/H antiporter, subunit D Gene: slr2009: Na/H antiporter, subunit D Gene: slr2007: Na/H antiporter, subunit D |
Gene: tll1817: Na/H antiporter, subunit D |
Gene: Tery_1615: Na/H antiporter, subunit D |
Na/H antiporter, subunit D |
| mnhE |
Gene: cce_1684: Predicted Na/H antiporter, subunit E |
Gene: Cyan7425_3544: Predicted Na/H antiporter, subunit E |
Gene: PCC8801_2760: Predicted Na/H antiporter, subunit E |
|
Gene: MAE_23740: Predicted Na/H antiporter, subunit E |
Gene: all1841: Predicted Na/H antiporter, subunit E |
|
Gene: Synpcc7942_1472: Predicted Na/H antiporter, subunit E |
Gene: CYA_1754: Predicted Na/H antiporter, subunit E |
Gene: SYNPCC7002_A2376: Predicted Na/H antiporter, subunit E |
|
2
Synechocystis sp. PCC 6803 Gene: slr2010: Predicted Na/H antiporter, subunit E Gene: slr2010: Predicted Na/H antiporter, subunit E |
Gene: tll1816: Predicted Na/H antiporter, subunit E |
Gene: Tery_1616: Predicted Na/H antiporter, subunit E |
Predicted Na/H antiporter, subunit E |
| mnhF |
Gene: cce_1683: Na/H antiporter, subunit F |
Gene: Cyan7425_3545: Na/H antiporter, subunit F |
Gene: PCC8801_2759: Na/H antiporter, subunit F |
|
Gene: MAE_23730: Na/H antiporter, subunit F |
Gene: asl1840: Na/H antiporter, subunit F |
|
Gene: Synpcc7942_1471: Na/H antiporter, subunit F |
Gene: CYA_1753: Na/H antiporter, subunit F |
Gene: SYNPCC7002_A2377: Na/H antiporter, subunit F |
|
2
Synechocystis sp. PCC 6803 Gene: ssr3409: Na/H antiporter, subunit F Gene: ssr3409: Na/H antiporter, subunit F |
Gene: tsl1815: Na/H antiporter, subunit F |
Gene: Tery_1617: Na/H antiporter, subunit F |
Na/H antiporter, subunit F |
| mnhG |
Gene: cce_1682: Na/H antiporter, subunit G |
Gene: Cyan7425_3546: Na/H antiporter, subunit G |
Gene: PCC8801_2758: Na/H antiporter, subunit G |
|
Gene: MAE_23720: Na/H antiporter, subunit G |
Gene: asl1839: Na/H antiporter, subunit G |
|
Gene: Synpcc7942_1470: Na/H antiporter, subunit G |
Gene: CYA_1752: Na/H antiporter, subunit G |
Gene: SYNPCC7002_A2378: Na/H antiporter, subunit G |
|
2
Synechocystis sp. PCC 6803 Gene: ssr3410: Na/H antiporter, subunit G Gene: ssr3410: Na/H antiporter, subunit G |
Gene: tsl1814: Na/H antiporter, subunit G |
Gene: Tery_1618: Na/H antiporter, subunit G |
Na/H antiporter, subunit G |
| slr2011 |
Gene: cce_1681: Predicted subunit of the Na/H antiporter |
Gene: Cyan7425_3547: Predicted subunit of the Na/H antiporter |
Gene: PCC8801_2757: Predicted subunit of the Na/H antiporter |
|
Gene: MAE_23710: Predicted subunit of the Na/H antiporter |
Gene: all1838: Predicted subunit of the Na/H antiporter |
|
Gene: Synpcc7942_1469: Predicted subunit of the Na/H antiporter |
Gene: CYA_1751: Predicted subunit of the Na/H antiporter |
Gene: SYNPCC7002_A2379: Predicted subunit of the Na/H antiporter |
|
2
Synechocystis sp. PCC 6803 Gene: slr2011: Predicted subunit of the Na/H antiporter Gene: slr2011: Predicted subunit of the Na/H antiporter |
Gene: tll1813: Predicted subunit of the Na/H antiporter |
Gene: Tery_1619: Predicted subunit of the Na/H antiporter |
Predicted subunit of the Na/H antiporter |
| mnhB |
Gene: cce_1680: Na/H antiporter, subunit B |
Gene: Cyan7425_3548: Na/H antiporter, subunit B |
Gene: PCC8801_2756: Na/H antiporter, subunit B |
|
Gene: MAE_23700: Na/H antiporter, subunit B |
Gene: all1837: Na/H antiporter, subunit B |
|
Gene: Synpcc7942_1468: Na/H antiporter, subunit B |
Gene: CYA_1750: Na/H antiporter, subunit B |
Gene: SYNPCC7002_A2380: Na/H antiporter, subunit B |
|
2
Synechocystis sp. PCC 6803 Gene: slr2012: Na/H antiporter, subunit B Gene: slr2012: Na/H antiporter, subunit B |
Gene: tll1812: Na/H antiporter, subunit B |
Gene: Tery_1620: Na/H antiporter, subunit B |
Na/H antiporter, subunit B |
| cce_1687 |
Gene: cce_1687: Predicted membrane protein (COG3431) |
2
Cyanothece sp. PCC 7425 Gene: Cyan7425_4185: Predicted membrane protein (COG3431) Gene: Cyan7425_4921: Predicted membrane protein (COG3431) |
*
Cyanothece sp. PCC 8801 Site: position = -46 score = 5.19807 sequence = ATAGCTTTTAATCTAT Site: position = -14 score = 4.1606 sequence = ATAGAATAAATACAAT Gene: PCC8801_1398: Predicted membrane protein (COG3431) |
|
Gene: MAE_20040: Predicted membrane protein (COG3431) |
Gene: alr0613: Predicted membrane protein (COG3431) |
Gene: PMT0460: Predicted membrane protein (COG3431) |
Gene: Synpcc7942_2327: Predicted membrane protein (COG3431) |
Gene: CYA_1481: Predicted membrane protein (COG3431) |
Gene: SYNPCC7002_A2582: Predicted membrane protein (COG3431) |
Gene: SYNW1513: Predicted membrane protein (COG3431) |
|
Gene: tlr2434: Predicted membrane protein (COG3431) |
|
Predicted membrane protein (COG3431) |
| cmpA |
*
Cyanothece sp. ATCC 51142 Site: position = -299 score = 4.8752 sequence = ATAGATAAATACCTAT Gene: cce_0305: Bicarbontate ABC transporter, substrate-binding protein |
*
Cyanothece sp. PCC 7425 Site: position = -286 score = 5.15647 sequence = ATAGACTTAGGGCTAT Gene: Cyan7425_4925: Bicarbontate ABC transporter, substrate-binding protein |
*
Cyanothece sp. PCC 8801 Site: position = -268 score = 4.49863 sequence = ATACATATTAAGCTAT Gene: PCC8801_3521: Bicarbontate ABC transporter, substrate-binding protein |
*
Gloeobacter violaceus PCC 7421 Site: position = -136 score = 5.0229 sequence = ATCGACTTTTCTCTAT Site: position = -168 score = 5.58602 sequence = ATAGATTAATATCTAT Gene: gvip279: Bicarbontate ABC transporter, substrate-binding protein |
*
Microcystis aeruginosa NIES-843 Site: position = -104 score = 4.6449 sequence = ATAGCTAAATTTCTAT Gene: MAE_19990: Bicarbontate ABC transporter, substrate-binding protein |
Gene: alr2877: Bicarbontate ABC transporter, substrate-binding protein |
|
*
Synechococcus elongatus PCC 7942 Site: position = -186 score = 4.85582 sequence = ATTGACTTAGCTCTAT Gene: Synpcc7942_1488: Bicarbontate ABC transporter, substrate-binding protein |
*
Synechococcus sp. JA-3-3Ab Site: position = -185 score = 4.21119 sequence = ATAAACGGAAGTCTAT Site: position = -153 score = 4.36003 sequence = ATTGTATTGTTTCTAT Gene: CYA_0894: Bicarbontate ABC transporter, substrate-binding protein |
|
|
*
Synechocystis sp. PCC 6803 Site: position = -208 score = 4.54532 sequence = TTGGATATTTATCTAT Gene: slr0040: Bicarbontate ABC transporter, substrate-binding protein |
*
Thermosynechococcus elongatus BP-1 Site: position = -124 score = 4.05052 sequence = ATAGATTGTTTGCAAT Gene: null: Bicarbontate ABC transporter, substrate-binding protein |
|
Bicarbontate ABC transporter, substrate-binding protein |
| cmpB |
Gene: cce_0304: Bicarbontate ABC transporter, permease protein |
Gene: Cyan7425_4924: Bicarbontate ABC transporter, permease protein |
Gene: PCC8801_3520: Bicarbontate ABC transporter, permease protein |
Gene: gvip280: Bicarbontate ABC transporter, permease protein |
Gene: MAE_20000: Bicarbontate ABC transporter, permease protein |
Gene: alr2878: Bicarbontate ABC transporter, permease protein |
|
Gene: Synpcc7942_1489: Bicarbontate ABC transporter, permease protein |
Gene: CYA_0893: Bicarbontate ABC transporter, permease protein |
|
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Gene: slr0041: Bicarbontate ABC transporter, permease protein |
Gene: null: Bicarbontate ABC transporter, permease protein |
|
Bicarbontate ABC transporter, permease protein |
| porB |
|
Gene: Cyan7425_2214: Low-CO2 inducible, outer membrane bicarbonate porin |
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*
Synechococcus sp. PCC 7002 Site: position = -294 score = 4.35588 sequence = ATAGTCGAAAGACTAT Gene: SYNPCC7002_G0011: Low-CO2 inducible, outer membrane bicarbonate porin |
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Gene: slr0042: Low-CO2 inducible, outer membrane bicarbonate porin |
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Low-CO2 inducible, outer membrane bicarbonate porin |
| cmpC |
Gene: cce_0303: Bicarbontate ABC transporter, ATP-binding protein 1 |
Gene: Cyan7425_4923: Bicarbontate ABC transporter, ATP-binding protein 1 |
Gene: PCC8801_3519: Bicarbontate ABC transporter, ATP-binding protein 1 |
Gene: gvip282: Bicarbontate ABC transporter, ATP-binding protein 1 |
Gene: MAE_20010: Bicarbontate ABC transporter, ATP-binding protein 1 |
Gene: alr2879: Bicarbontate ABC transporter, ATP-binding protein 1 |
|
Gene: Synpcc7942_1490: Bicarbontate ABC transporter, ATP-binding protein 1 |
Gene: CYA_0892: Bicarbontate ABC transporter, ATP-binding protein 1 |
|
|
Gene: slr0043: Bicarbontate ABC transporter, ATP-binding protein 1 |
Gene: null: Bicarbontate ABC transporter, ATP-binding protein 1 |
|
Bicarbontate ABC transporter, ATP-binding protein 1 |
| cmpD |
Gene: cce_0302: Bicarbontate ABC transporter, ATP-binding protein 2 |
Gene: Cyan7425_4922: Bicarbontate ABC transporter, ATP-binding protein 2 |
Gene: PCC8801_3518: Bicarbontate ABC transporter, ATP-binding protein 2 |
Gene: gvip283: Bicarbontate ABC transporter, ATP-binding protein 2 |
Gene: MAE_20020: Bicarbontate ABC transporter, ATP-binding protein 2 |
Gene: alr2880: Bicarbontate ABC transporter, ATP-binding protein 2 |
|
Gene: Synpcc7942_1491: Bicarbontate ABC transporter, ATP-binding protein 2 |
Gene: CYA_0891: Bicarbontate ABC transporter, ATP-binding protein 2 |
|
|
Gene: slr0044: Bicarbontate ABC transporter, ATP-binding protein 2 |
Gene: null: Bicarbontate ABC transporter, ATP-binding protein 2 |
|
Bicarbontate ABC transporter, ATP-binding protein 2 |
| ecaB |
|
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|
2
Gloeobacter violaceus PCC 7421 Gene: glr0945: Periplasmic carbonic anhydrase Gene: gvip281: Periplasmic carbonic anhydrase |
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Periplasmic carbonic anhydrase |
| Synpcc7942_2328 |
|
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*
Microcystis aeruginosa NIES-843 Site: position = -80 score = 5.01353 sequence = ATAAAGTTTTGTCTAT Site: position = -111 score = 4.917 sequence = ATAGATTTATAACAAT Site: position = -196 score = 4.6565 sequence = ATAGGTTTAAATCAAT Gene: MAE_62080: Predicted permease |
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Predicted permease |
| sbtA |
*
Cyanothece sp. ATCC 51142 Site: position = -181 score = 4.03161 sequence = ATAGATCGATATATAT Gene: cce_2939: High-affinity, low-flux sodium dependent bicarbonate transporter |
*
Cyanothece sp. PCC 7425 Site: position = -94 score = 4.22612 sequence = TTTTACCTATGTCTAT Gene: Cyan7425_5063: High-affinity, low-flux sodium dependent bicarbonate transporter |
*
Cyanothece sp. PCC 8801 Site: position = -174 score = 5.44315 sequence = ATAGATAAATGTCTAT Gene: PCC8801_1249: High-affinity, low-flux sodium dependent bicarbonate transporter |
|
Gene: MAE_62090: High-affinity, low-flux sodium dependent bicarbonate transporter |
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Nostoc sp. PCC 7120 Site: position = -191 score = 4.58621 sequence = ATAGAATTTTGGCTCT Site: position = -173 score = 4.78035 sequence = ATAAATATTGATCTAT Gene: all2134: High-affinity, low-flux sodium dependent bicarbonate transporter |
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Synechococcus elongatus PCC 7942 Site: position = -207 score = 4.60931 sequence = ATAGACAGGAATCTAT Gene: Synpcc7942_1475: High-affinity, low-flux sodium dependent bicarbonate transporter |
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Synechococcus sp. PCC 7002 Site: position = -134 score = 4.9125 sequence = ATAGAGCTAAATCTAT Gene: SYNPCC7002_A0470: High-affinity, low-flux sodium dependent bicarbonate transporter |
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Synechocystis sp. PCC 6803 Site: position = -182 score = 4.66804 sequence = ATAGACTTTAGCTTAT Site: position = -136 score = 5.03171 sequence = ATAGACAAGAGTCTAT Gene: slr1512: High-affinity, low-flux sodium dependent bicarbonate transporter |
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High-affinity, low-flux sodium dependent bicarbonate transporter |
| sbtB |
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Cyanothece sp. ATCC 51142 Site: position = -52 score = 4.54216 sequence = ATAGATTTTTGTCTTA Gene: cce_2937: Predicted membrane protein |
Gene: Cyan7425_5062: Predicted membrane protein |
Gene: PCC8801_1248: Predicted membrane protein |
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Gene: MAE_62100: Predicted membrane protein |
Gene: all2133: Predicted membrane protein |
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Gene: Synpcc7942_1476: Predicted membrane protein |
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Synechococcus sp. PCC 7002 Site: position = -131 score = 4.5769 sequence = ATAGACTTAAAGATAT Site: position = -99 score = 4.22255 sequence = ATAGAGTCTTGTCTTT Gene: SYNPCC7002_A0472: Predicted membrane protein |
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Gene: slr1513: Predicted membrane protein |
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Predicted membrane protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |