Regulon of CcmR in Gloeobacter violaceus PCC 7421
| Regulator type: | Transcription factor |
| TF locus tag: | gll1001 |
| Regulator family: | LysR |
| Regulation mode: | repressor |
| Biological process: | Carbon dioxide fixation |
| Effector: | |
| Regulog: | CcmR - Cyanobacteria |
| Statistics of regulated genes: | |
| - Genes | 10 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Cyanobacteria
- By TF family - LysR
- By pathway - Carbon dioxide fixation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -34
Score: 5.2 Sequence: ATAGAACTATGTCTAT
Locus tag: gll1001
Name: ccmR Funciton: Carbon assimilation transcriptional regulator, LysR family |
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ccmR
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Carbon assimilation transcriptional regulator, LysR family
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Position: -139
Score: 5 Sequence: ATCTACTTTTATCTAT
Locus tag: gvip132
Name: ndhF3 Funciton: NADH dehydrogenase subunit F
Locus tag: gvip133
Name: ndhD3 Funciton: NADH dehydrogenase subunit D
Locus tag: gvip134
Name: cupA Funciton: CO2 uptake protein
Locus tag: glr1006
Name: cupS Funciton: CO2 uptake transporter, small subunit |
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ndhF3
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NADH dehydrogenase subunit F
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ndhD3
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NADH dehydrogenase subunit D
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cupA
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CO2 uptake protein
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cupS
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CO2 uptake transporter, small subunit
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Position: -168
Score: 5.6 Sequence: ATAGATTAATATCTAT
Position: -136
Score: 5 Sequence: ATCGACTTTTCTCTAT
Locus tag: gvip279
Name: cmpA Funciton: Bicarbontate ABC transporter, substrate-binding protein
Locus tag: gvip280
Name: cmpB Funciton: Bicarbontate ABC transporter, permease protein
Locus tag: gvip281
Name: ecaB Funciton: Periplasmic carbonic anhydrase
Locus tag: gvip282
Name: cmpC Funciton: Bicarbontate ABC transporter, ATP-binding protein 1
Locus tag: gvip283
Name: cmpD Funciton: Bicarbontate ABC transporter, ATP-binding protein 2 |
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cmpA
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Bicarbontate ABC transporter, substrate-binding protein
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cmpB
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Bicarbontate ABC transporter, permease protein
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ecaB
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Periplasmic carbonic anhydrase
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cmpC
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Bicarbontate ABC transporter, ATP-binding protein 1
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cmpD
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Bicarbontate ABC transporter, ATP-binding protein 2
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |