Regulon of CcmR in Gloeobacter violaceus PCC 7421

Properties
Regulator type:	Transcription factor
TF locus tag:	gll1001
Regulator family:	LysR
Regulation mode:	repressor
Biological process:	Carbon dioxide fixation
Effector:
Regulog:	CcmR - Cyanobacteria
Statistics of regulated genes:
- Genes	10
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 72 sites [see more]

Member of regulog collections

By taxonomy - Cyanobacteria
By TF family - LysR
By pathway - Carbon dioxide fixation

Regulated operons
	Locus Tag	Name	Function
Position: -34 Score: 5.2 Sequence: ATAGAACTATGTCTAT Locus tag: gll1001 Name: ccmR Funciton: Carbon assimilation transcriptional regulator, LysR family
	gll1001	ccmR	Carbon assimilation transcriptional regulator, LysR family
Position: -139 Score: 5 Sequence: ATCTACTTTTATCTAT Locus tag: gvip132 Name: ndhF3 Funciton: NADH dehydrogenase subunit F Locus tag: gvip133 Name: ndhD3 Funciton: NADH dehydrogenase subunit D Locus tag: gvip134 Name: cupA Funciton: CO2 uptake protein Locus tag: glr1006 Name: cupS Funciton: CO2 uptake transporter, small subunit
	gvip132	ndhF3	NADH dehydrogenase subunit F
	gvip133	ndhD3	NADH dehydrogenase subunit D
	gvip134	cupA	CO2 uptake protein
	glr1006	cupS	CO2 uptake transporter, small subunit
Position: -168 Score: 5.6 Sequence: ATAGATTAATATCTAT Position: -136 Score: 5 Sequence: ATCGACTTTTCTCTAT Locus tag: gvip279 Name: cmpA Funciton: Bicarbontate ABC transporter, substrate-binding protein Locus tag: gvip280 Name: cmpB Funciton: Bicarbontate ABC transporter, permease protein Locus tag: gvip281 Name: ecaB Funciton: Periplasmic carbonic anhydrase Locus tag: gvip282 Name: cmpC Funciton: Bicarbontate ABC transporter, ATP-binding protein 1 Locus tag: gvip283 Name: cmpD Funciton: Bicarbontate ABC transporter, ATP-binding protein 2
	gvip279	cmpA	Bicarbontate ABC transporter, substrate-binding protein
	gvip280	cmpB	Bicarbontate ABC transporter, permease protein
	gvip281	ecaB	Periplasmic carbonic anhydrase
	gvip282	cmpC	Bicarbontate ABC transporter, ATP-binding protein 1
	gvip283	cmpD	Bicarbontate ABC transporter, ATP-binding protein 2

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD