Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Profile of regulator CcmR in Cyanobacteria

Properties
Regulator family: LysR
Regulation mode: repressor
Biological process: Carbon dioxide fixation
Effector:
Regulog: CcmR - Cyanobacteria
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Cyanothece sp. ATCC 51142
cce_1689 bicA -200 5 ATAGAATCTAGTCTAT
cce_0305 cmpA -299 4.9 ATAGATAAATACCTAT
cce_1689 bicA -232 4.5 ATAGTAATTAGCCTAT
cce_3974 glpX -74 5 ATAGACTTTTGACTAA
cce_0603 ndhF3 -74 5.5 ATAGACTTAATTCTAT
cce_3731 ccmR -101 4.8 ATGGAAATAAGTCTAT
cce_3731 ccmR -133 4.3 ATAGATTTATTTCAAC
cce_2939 sbtA -181 4 ATAGATCGATATATAT
cce_2937 sbtB -52 4.5 ATAGATTTTTGTCTTA
cce_2494 mnhD -180 5.1 ATTGATTTTAGGCTAT
Cyanothece sp. PCC 7425
Cyan7425_3855 ccmR -93 5.9 ATAGATTTTTGTCTAT
Cyan7425_3542 mnhC -121 4.7 ATTTATAAATATCTAT
Cyan7425_4925 cmpA -286 5.2 ATAGACTTAGGGCTAT
Cyan7425_5063 sbtA -94 4.2 TTTTACCTATGTCTAT
Cyanothece sp. PCC 8801
PCC8801_2762 mnhC -24 4.7 ATAGTTTTTTGTATAT
PCC8801_3521 cmpA -268 4.5 ATACATATTAAGCTAT
PCC8801_3646 glpX -74 5 ATAGACTTTTGACTAA
PCC8801_2762 mnhC -56 4.8 ATAGGCTTTAAGCTAT
PCC8801_1249 sbtA -174 5.4 ATAGATAAATGTCTAT
PCC8801_4247 ndhF3 -71 5.6 ATAGACTAAAGTCTAT
PCC8801_4247 ndhF3 -8 5 ATTGTTATATGTCTAT
PCC8801_3406 ccmR -144 4.4 ATAGAATTTAATCAAA
PCC8801_3406 ccmR -112 4.8 ATTGTATTTAATCTAT
PCC8801_1398 cce_1687 -46 5.2 ATAGCTTTTAATCTAT
PCC8801_1398 cce_1687 -14 4.2 ATAGAATAAATACAAT
Gloeobacter violaceus PCC 7421
gvip279 cmpA -136 5 ATCGACTTTTCTCTAT
gvip279 cmpA -168 5.6 ATAGATTAATATCTAT
gll1001 ccmR -34 5.2 ATAGAACTATGTCTAT
gvip132 ndhF3 -139 5 ATCTACTTTTATCTAT
Microcystis aeruginosa NIES-843
MAE_30020 glpX -71 4.9 ATAGACTTTTGACTGT
MAE_62070 ccmR -207 4.9 ATTGTTATAAATCTAT
MAE_62070 ccmR -122 4.9 ATTGATTTAAACCTAT
MAE_62070 ccmR -238 4.3 ATAGACAAAACTTTAT
MAE_15110 ccmR -71 4.9 ATTGACTAGAATCTAT
MAE_19990 cmpA -104 4.6 ATAGCTAAATTTCTAT
MAE_62080 Synpcc7942_2328 -80 5 ATAAAGTTTTGTCTAT
MAE_62080 Synpcc7942_2328 -111 4.9 ATAGATTTATAACAAT
MAE_62080 Synpcc7942_2328 -196 4.7 ATAGGTTTAAATCAAT
Nostoc sp. PCC 7120
alr4156 ndhF3 -245 5.9 ATAGATTTTTGTCTAT
alr1320 cupS 34 4.4 ATAGTTTTAAAACTCT
all0862 ccmR -146 5.8 ATAGATTTTTATCTAT
all0862 ccmR -72 4.9 CTAGTCTTATATCTAT
all0862 ccmR -285 5.8 ATAGATTTTTATCTAT
all2134 sbtA -191 4.6 ATAGAATTTTGGCTCT
all2134 sbtA -173 4.8 ATAAATATTGATCTAT
Synechococcus elongatus PCC 7942
Synpcc7942_1488 cmpA -186 4.9 ATTGACTTAGCTCTAT
Synpcc7942_1475 sbtA -207 4.6 ATAGACAGGAATCTAT
Synpcc7942_1310 ccmR -34 5.7 ATAGACTTAAATCTAT
Synechococcus sp. JA-3-3Ab
CYA_0894 cmpA -185 4.2 ATAAACGGAAGTCTAT
CYA_0640 ndhF3 -107 5 CTTGATTTTTGTCTAT
CYA_0894 cmpA -153 4.4 ATTGTATTGTTTCTAT
Synechococcus sp. PCC 7002
SYNPCC7002_A2371 bicA -123 5.2 ATAGATATTAAACTAT
SYNPCC7002_A0472 sbtB -131 4.6 ATAGACTTAAAGATAT
SYNPCC7002_A0472 sbtB -99 4.2 ATAGAGTCTTGTCTTT
SYNPCC7002_G0011 porB -294 4.4 ATAGTCGAAAGACTAT
SYNPCC7002_A0470 sbtA -134 4.9 ATAGAGCTAAATCTAT
SYNPCC7002_A0171 ccmR -63 5 ATTGACTCTAGTCTAT
Synechocystis sp. PCC 6803
slr2006 mnhC -125 3.8 ATAGAATCTATGCAAT
slr2007 mnhD -107 4.3 ATTGTGATTGGTCTAT
slr0040 cmpA -208 4.5 TTGGATATTTATCTAT
sll0834 bicA -45 5.3 ATAGACTAAAGACTAT
sll0834 bicA -76 4.4 CTAGAATATTCTCTAT
slr1512 sbtA -182 4.7 ATAGACTTTAGCTTAT
slr2094 glpX -71 5.6 ATAGACTTTTGACTAT
sll1732 ndhF3 -204 3.9 ATTGTCGCTTGACTAT
sll1594 ccmR -179 4.8 ATAGCCATAGGTCTAT
sll1594 ccmR -240 4.7 ATTGGCTTTATTCTAT
slr1512 sbtA -136 5 ATAGACAAGAGTCTAT
Thermosynechococcus elongatus BP-1
null cmpA -124 4.1 ATAGATTGTTTGCAAT
tll1818 mnhC -193 4.4 ATTGACATTGATCTAA
tll1818 mnhC -219 5 ATTGATAAAAATCTAT
tlr2037 ccmR -42 5.1 ATAGAATTTCGTCTAT
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