Regulon of CcmR in Thermosynechococcus elongatus BP-1
| Regulator type: | Transcription factor |
| TF locus tag: | tlr2037 |
| Regulator family: | LysR |
| Regulation mode: | repressor |
| Biological process: | Carbon dioxide fixation |
| Effector: | |
| Regulog: | CcmR - Cyanobacteria |
| Statistics of regulated genes: | |
| - Genes | 12 |
| - Operons | 3 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Cyanobacteria
- By TF family - LysR
- By pathway - Carbon dioxide fixation
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -124
Score: 4.1 Sequence: ATAGATTGTTTGCAAT
Locus tag: null
Name: cmpA Funciton: Bicarbontate ABC transporter, substrate-binding protein
Locus tag: null
Name: cmpB Funciton: Bicarbontate ABC transporter, permease protein
Locus tag: null
Name: cmpC Funciton: Bicarbontate ABC transporter, ATP-binding protein 1
Locus tag: null
Name: cmpD Funciton: Bicarbontate ABC transporter, ATP-binding protein 2 |
|||
|
cmpA
|
Bicarbontate ABC transporter, substrate-binding protein
|
||
|
cmpB
|
Bicarbontate ABC transporter, permease protein
|
||
|
cmpC
|
Bicarbontate ABC transporter, ATP-binding protein 1
|
||
|
cmpD
|
Bicarbontate ABC transporter, ATP-binding protein 2
|
||
|
Position: -219
Score: 5 Sequence: ATTGATAAAAATCTAT
Position: -193
Score: 4.4 Sequence: ATTGACATTGATCTAA
Locus tag: tll1818
Name: mnhC Funciton: Na/H antiporter, subunit C
Locus tag: tll1817
Name: mnhD Funciton: Na/H antiporter, subunit D
Locus tag: tll1816
Name: mnhE Funciton: Predicted Na/H antiporter, subunit E
Locus tag: tsl1815
Name: mnhF Funciton: Na/H antiporter, subunit F
Locus tag: tsl1814
Name: mnhG Funciton: Na/H antiporter, subunit G
Locus tag: tll1813
Name: slr2011 Funciton: Predicted subunit of the Na/H antiporter
Locus tag: tll1812
Name: mnhB Funciton: Na/H antiporter, subunit B |
|||
|
mnhC
|
Na/H antiporter, subunit C
|
||
|
mnhD
|
Na/H antiporter, subunit D
|
||
|
mnhE
|
Predicted Na/H antiporter, subunit E
|
||
|
mnhF
|
Na/H antiporter, subunit F
|
||
|
mnhG
|
Na/H antiporter, subunit G
|
||
|
slr2011
|
Predicted subunit of the Na/H antiporter
|
||
|
mnhB
|
Na/H antiporter, subunit B
|
||
|
Position: -42
Score: 5.1 Sequence: ATAGAATTTCGTCTAT
Locus tag: tlr2037
Name: ccmR Funciton: Carbon assimilation transcriptional regulator, LysR family |
|||
|
ccmR
|
Carbon assimilation transcriptional regulator, LysR family
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |