Regulon of CcmR in Synechococcus sp. JA-3-3Ab

Properties
Regulator type:	Transcription factor
TF locus tag:	CYA_1081
Regulator family:	LysR
Regulation mode:	repressor
Biological process:	Carbon dioxide fixation
Effector:
Regulog:	CcmR - Cyanobacteria
Statistics of regulated genes:
- Genes	5
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 72 sites [see more]

Member of regulog collections

By taxonomy - Cyanobacteria
By TF family - LysR
By pathway - Carbon dioxide fixation

Regulated operons
	Locus Tag	Name	Function
Position: -185 Score: 4.2 Sequence: ATAAACGGAAGTCTAT Position: -153 Score: 4.4 Sequence: ATTGTATTGTTTCTAT Locus tag: CYA_0894 Name: cmpA Funciton: Bicarbontate ABC transporter, substrate-binding protein
	CYA_0894	cmpA	Bicarbontate ABC transporter, substrate-binding protein
Position: -107 Score: 5 Sequence: CTTGATTTTTGTCTAT Locus tag: CYA_0640 Name: ndhF3 Funciton: NADH dehydrogenase subunit F Locus tag: CYA_0639 Name: ndhD3 Funciton: NADH dehydrogenase subunit D Locus tag: CYA_0638 Name: cupA Funciton: CO2 uptake protein Locus tag: CYA_0636 Name: cupS Funciton: CO2 uptake transporter, small subunit
	CYA_0640	ndhF3	NADH dehydrogenase subunit F
	CYA_0639	ndhD3	NADH dehydrogenase subunit D
	CYA_0638	cupA	CO2 uptake protein
	CYA_0636	cupS	CO2 uptake transporter, small subunit

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD