Orthologous regulated operons containing nhaS gene

Properties
Regulog:	CcmR - Cyanobacteria
Regulator type:	Transcription factor
Regulator family:	LysR
Regulation mode:	repressor
Biological process:	Carbon dioxide fixation
Effector:
Phylum:	Cyanobacteria

Built upon 72 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Cyanothece sp. ATCC 51142
Position: -232 Score: 4.4809 Sequence: ATAGTAATTAGCCTAT Position: -200 Score: 5.04476 Sequence: ATAGAATCTAGTCTAT Locus tag: cce_1689 Name: bicA Funciton: Bicarbonate transporter Locus tag: cce_1688 Name: nhaS Funciton: Predicted sodium/hydrogen exchanger Locus tag: cce_1687 Name: cce_1687 Funciton: Predicted membrane protein (COG3431) Locus tag: cce_1686 Name: mnhC Funciton: Na/H antiporter, subunit C Locus tag: cce_1685 Name: mnhD Funciton: Na/H antiporter, subunit D Locus tag: cce_1684 Name: mnhE Funciton: Predicted Na/H antiporter, subunit E Locus tag: cce_1683 Name: mnhF Funciton: Na/H antiporter, subunit F Locus tag: cce_1682 Name: mnhG Funciton: Na/H antiporter, subunit G Locus tag: cce_1681 Name: slr2011 Funciton: Predicted subunit of the Na/H antiporter Locus tag: cce_1680 Name: mnhB Funciton: Na/H antiporter, subunit B
bicA-nhaS-cce_1687-mnhC-mnhD-mnhE-mnhF-mnhG-slr2011-mnhB	-232	4.5	ATAGTAATTAGCCTAT	cce_1689
	-200	5	ATAGAATCTAGTCTAT
Microcystis aeruginosa NIES-843
Position: -196 Score: 4.6565 Sequence: ATAGGTTTAAATCAAT Position: -111 Score: 4.917 Sequence: ATAGATTTATAACAAT Position: -80 Score: 5.01353 Sequence: ATAAAGTTTTGTCTAT Locus tag: MAE_62080 Name: Synpcc7942_2328 Funciton: Predicted permease Locus tag: MAE_62090 Name: sbtA Funciton: High-affinity, low-flux sodium dependent bicarbonate transporter Locus tag: MAE_62100 Name: sbtB Funciton: Predicted membrane protein Locus tag: MAE_62110 Name: nhaS Funciton: Predicted sodium/hydrogen exchanger
Synpcc7942_2328-sbtA-sbtB-nhaS	-196	4.7	ATAGGTTTAAATCAAT	MAE_62080
	-111	4.9	ATAGATTTATAACAAT
	-80	5	ATAAAGTTTTGTCTAT
Synechococcus sp. PCC 7002
Position: -123 Score: 5.16858 Sequence: ATAGATATTAAACTAT Locus tag: SYNPCC7002_A2371 Name: bicA Funciton: Bicarbonate transporter Locus tag: SYNPCC7002_A2372 Name: nhaS Funciton: Predicted sodium/hydrogen exchanger Locus tag: SYNPCC7002_A2373 Name: mnhC Funciton: Na/H antiporter, subunit C Locus tag: SYNPCC7002_A2374 Name: mnhD Funciton: Na/H antiporter, subunit D Locus tag: SYNPCC7002_A2375 Name: mnhD Funciton: Na/H antiporter, subunit D Locus tag: SYNPCC7002_A2376 Name: mnhE Funciton: Predicted Na/H antiporter, subunit E Locus tag: SYNPCC7002_A2377 Name: mnhF Funciton: Na/H antiporter, subunit F Locus tag: SYNPCC7002_A2378 Name: mnhG Funciton: Na/H antiporter, subunit G Locus tag: SYNPCC7002_A2379 Name: slr2011 Funciton: Predicted subunit of the Na/H antiporter Locus tag: SYNPCC7002_A2380 Name: mnhB Funciton: Na/H antiporter, subunit B
bicA-nhaS-mnhC-mnhD-mnhD-mnhE-mnhF-mnhG-slr2011-mnhB	-123	5.2	ATAGATATTAAACTAT	SYNPCC7002_A2371