Regulon of CcmR in Cyanothece sp. PCC 7425

Properties
Regulator type:	Transcription factor
TF locus tag:	Cyan7425_3855
Regulator family:	LysR
Regulation mode:	repressor
Biological process:	Carbon dioxide fixation
Effector:
Regulog:	CcmR - Cyanobacteria
Statistics of regulated genes:
- Genes	15
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 72 sites [see more]

Member of regulog collections

By taxonomy - Cyanobacteria
By TF family - LysR
By pathway - Carbon dioxide fixation

Regulated operons
	Locus Tag	Name	Function
Position: -121 Score: 4.7 Sequence: ATTTATAAATATCTAT Locus tag: Cyan7425_3542 Name: mnhC Funciton: Na/H antiporter, subunit C Locus tag: Cyan7425_3543 Name: mnhD Funciton: Na/H antiporter, subunit D Locus tag: Cyan7425_3544 Name: mnhE Funciton: Predicted Na/H antiporter, subunit E Locus tag: Cyan7425_3545 Name: mnhF Funciton: Na/H antiporter, subunit F Locus tag: Cyan7425_3546 Name: mnhG Funciton: Na/H antiporter, subunit G Locus tag: Cyan7425_3547 Name: slr2011 Funciton: Predicted subunit of the Na/H antiporter Locus tag: Cyan7425_3548 Name: mnhB Funciton: Na/H antiporter, subunit B
	Cyan7425_3542	mnhC	Na/H antiporter, subunit C
	Cyan7425_3543	mnhD	Na/H antiporter, subunit D
	Cyan7425_3544	mnhE	Predicted Na/H antiporter, subunit E
	Cyan7425_3545	mnhF	Na/H antiporter, subunit F
	Cyan7425_3546	mnhG	Na/H antiporter, subunit G
	Cyan7425_3547	slr2011	Predicted subunit of the Na/H antiporter
	Cyan7425_3548	mnhB	Na/H antiporter, subunit B
Position: -94 Score: 4.2 Sequence: TTTTACCTATGTCTAT Locus tag: Cyan7425_5063 Name: sbtA Funciton: High-affinity, low-flux sodium dependent bicarbonate transporter Locus tag: Cyan7425_5062 Name: sbtB Funciton: Predicted membrane protein
	Cyan7425_5063	sbtA	High-affinity, low-flux sodium dependent bicarbonate transporter
	Cyan7425_5062	sbtB	Predicted membrane protein
Position: -286 Score: 5.2 Sequence: ATAGACTTAGGGCTAT Locus tag: Cyan7425_4925 Name: cmpA Funciton: Bicarbontate ABC transporter, substrate-binding protein Locus tag: Cyan7425_4924 Name: cmpB Funciton: Bicarbontate ABC transporter, permease protein Locus tag: Cyan7425_4923 Name: cmpC Funciton: Bicarbontate ABC transporter, ATP-binding protein 1 Locus tag: Cyan7425_4922 Name: cmpD Funciton: Bicarbontate ABC transporter, ATP-binding protein 2 Locus tag: Cyan7425_4921 Name: cce_1687 Funciton: Predicted membrane protein (COG3431)
	Cyan7425_4925	cmpA	Bicarbontate ABC transporter, substrate-binding protein
	Cyan7425_4924	cmpB	Bicarbontate ABC transporter, permease protein
	Cyan7425_4923	cmpC	Bicarbontate ABC transporter, ATP-binding protein 1
	Cyan7425_4922	cmpD	Bicarbontate ABC transporter, ATP-binding protein 2
	Cyan7425_4921	cce_1687	Predicted membrane protein (COG3431)
Position: -93 Score: 5.9 Sequence: ATAGATTTTTGTCTAT Locus tag: Cyan7425_3855 Name: ccmR Funciton: Carbon assimilation transcriptional regulator, LysR family
	Cyan7425_3855	ccmR	Carbon assimilation transcriptional regulator, LysR family

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD