Regulon of CcmR in Synechococcus elongatus PCC 7942

Properties
Regulator type:	Transcription factor
TF locus tag:	Synpcc7942_1310
Regulator family:	LysR
Regulation mode:	repressor
Biological process:	Carbon dioxide fixation
Effector:
Regulog:	CcmR - Cyanobacteria
Statistics of regulated genes:
- Genes	6
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 72 sites [see more]

Member of regulog collections

By taxonomy - Cyanobacteria
By TF family - LysR
By pathway - Carbon dioxide fixation

Regulated operons
	Locus Tag	Name	Function
Position: -186 Score: 4.9 Sequence: ATTGACTTAGCTCTAT Locus tag: Synpcc7942_1488 Name: cmpA Funciton: Bicarbontate ABC transporter, substrate-binding protein Locus tag: Synpcc7942_1489 Name: cmpB Funciton: Bicarbontate ABC transporter, permease protein Locus tag: Synpcc7942_1490 Name: cmpC Funciton: Bicarbontate ABC transporter, ATP-binding protein 1 Locus tag: Synpcc7942_1491 Name: cmpD Funciton: Bicarbontate ABC transporter, ATP-binding protein 2
	Synpcc7942_1488	cmpA	Bicarbontate ABC transporter, substrate-binding protein
	Synpcc7942_1489	cmpB	Bicarbontate ABC transporter, permease protein
	Synpcc7942_1490	cmpC	Bicarbontate ABC transporter, ATP-binding protein 1
	Synpcc7942_1491	cmpD	Bicarbontate ABC transporter, ATP-binding protein 2
Position: -34 Score: 5.7 Sequence: ATAGACTTAAATCTAT Locus tag: Synpcc7942_1310 Name: ccmR Funciton: Carbon assimilation transcriptional regulator, LysR family
	Synpcc7942_1310	ccmR	Carbon assimilation transcriptional regulator, LysR family
Position: -207 Score: 4.6 Sequence: ATAGACAGGAATCTAT Locus tag: Synpcc7942_1475 Name: sbtA Funciton: High-affinity, low-flux sodium dependent bicarbonate transporter
	Synpcc7942_1475	sbtA	High-affinity, low-flux sodium dependent bicarbonate transporter

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD