Regulon of CcmR in Synechococcus elongatus PCC 7942
| Regulator type: | Transcription factor |
| TF locus tag: | Synpcc7942_1310 |
| Regulator family: | LysR |
| Regulation mode: | repressor |
| Biological process: | Carbon dioxide fixation |
| Effector: | |
| Regulog: | CcmR - Cyanobacteria |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Cyanobacteria
- By TF family - LysR
- By pathway - Carbon dioxide fixation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -186
Score: 4.9 Sequence: ATTGACTTAGCTCTAT
Locus tag: Synpcc7942_1488
Name: cmpA Funciton: Bicarbontate ABC transporter, substrate-binding protein
Locus tag: Synpcc7942_1489
Name: cmpB Funciton: Bicarbontate ABC transporter, permease protein
Locus tag: Synpcc7942_1490
Name: cmpC Funciton: Bicarbontate ABC transporter, ATP-binding protein 1
Locus tag: Synpcc7942_1491
Name: cmpD Funciton: Bicarbontate ABC transporter, ATP-binding protein 2 |
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cmpA
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Bicarbontate ABC transporter, substrate-binding protein
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cmpB
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Bicarbontate ABC transporter, permease protein
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cmpC
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Bicarbontate ABC transporter, ATP-binding protein 1
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cmpD
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Bicarbontate ABC transporter, ATP-binding protein 2
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Position: -34
Score: 5.7 Sequence: ATAGACTTAAATCTAT
Locus tag: Synpcc7942_1310
Name: ccmR Funciton: Carbon assimilation transcriptional regulator, LysR family |
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ccmR
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Carbon assimilation transcriptional regulator, LysR family
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Position: -207
Score: 4.6 Sequence: ATAGACAGGAATCTAT
Locus tag: Synpcc7942_1475
Name: sbtA Funciton: High-affinity, low-flux sodium dependent bicarbonate transporter |
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sbtA
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High-affinity, low-flux sodium dependent bicarbonate transporter
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |