Regulon of CcmR in Nostoc sp. PCC 7120
| Regulator type: | Transcription factor |
| TF locus tag: | all0862 |
| Regulator family: | LysR |
| Regulation mode: | repressor |
| Biological process: | Carbon dioxide fixation |
| Effector: | |
| Regulog: | CcmR - Cyanobacteria |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Cyanobacteria
- By TF family - LysR
- By pathway - Carbon dioxide fixation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -245
Score: 5.9 Sequence: ATAGATTTTTGTCTAT
Locus tag: alr4156
Name: ndhF3 Funciton: NADH dehydrogenase subunit F
Locus tag: alr4157
Name: ndhD3 Funciton: NADH dehydrogenase subunit D |
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ndhF3
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NADH dehydrogenase subunit F
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ndhD3
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NADH dehydrogenase subunit D
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Position: 34
Score: 4.4 Sequence: ATAGTTTTAAAACTCT
Locus tag: alr1320
Name: cupS Funciton: CO2 uptake transporter, small subunit |
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cupS
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CO2 uptake transporter, small subunit
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Position: -285
Score: 5.8 Sequence: ATAGATTTTTATCTAT
Position: -146
Score: 5.8 Sequence: ATAGATTTTTATCTAT
Position: -72
Score: 4.9 Sequence: CTAGTCTTATATCTAT
Locus tag: all0862
Name: ccmR Funciton: Carbon assimilation transcriptional regulator, LysR family |
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ccmR
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Carbon assimilation transcriptional regulator, LysR family
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Position: -191
Score: 4.6 Sequence: ATAGAATTTTGGCTCT
Position: -173
Score: 4.8 Sequence: ATAAATATTGATCTAT
Locus tag: all2134
Name: sbtA Funciton: High-affinity, low-flux sodium dependent bicarbonate transporter
Locus tag: all2133
Name: sbtB Funciton: Predicted membrane protein |
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sbtA
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High-affinity, low-flux sodium dependent bicarbonate transporter
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sbtB
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Predicted membrane protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |