Regulon of CcmR in Nostoc sp. PCC 7120

Properties
Regulator type:	Transcription factor
TF locus tag:	all0862
Regulator family:	LysR
Regulation mode:	repressor
Biological process:	Carbon dioxide fixation
Effector:
Regulog:	CcmR - Cyanobacteria
Statistics of regulated genes:
- Genes	6
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 72 sites [see more]

Member of regulog collections

By taxonomy - Cyanobacteria
By TF family - LysR
By pathway - Carbon dioxide fixation

Regulated operons
	Locus Tag	Name	Function
Position: -245 Score: 5.9 Sequence: ATAGATTTTTGTCTAT Locus tag: alr4156 Name: ndhF3 Funciton: NADH dehydrogenase subunit F Locus tag: alr4157 Name: ndhD3 Funciton: NADH dehydrogenase subunit D
	alr4156	ndhF3	NADH dehydrogenase subunit F
	alr4157	ndhD3	NADH dehydrogenase subunit D
Position: 34 Score: 4.4 Sequence: ATAGTTTTAAAACTCT Locus tag: alr1320 Name: cupS Funciton: CO2 uptake transporter, small subunit
	alr1320	cupS	CO2 uptake transporter, small subunit
Position: -285 Score: 5.8 Sequence: ATAGATTTTTATCTAT Position: -146 Score: 5.8 Sequence: ATAGATTTTTATCTAT Position: -72 Score: 4.9 Sequence: CTAGTCTTATATCTAT Locus tag: all0862 Name: ccmR Funciton: Carbon assimilation transcriptional regulator, LysR family
	all0862	ccmR	Carbon assimilation transcriptional regulator, LysR family
Position: -191 Score: 4.6 Sequence: ATAGAATTTTGGCTCT Position: -173 Score: 4.8 Sequence: ATAAATATTGATCTAT Locus tag: all2134 Name: sbtA Funciton: High-affinity, low-flux sodium dependent bicarbonate transporter Locus tag: all2133 Name: sbtB Funciton: Predicted membrane protein
	all2134	sbtA	High-affinity, low-flux sodium dependent bicarbonate transporter
	all2133	sbtB	Predicted membrane protein

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD