Regulon of CcmR in Microcystis aeruginosa NIES-843

Properties
Regulator type:	Transcription factor
TF locus tag:	MAE_62070, MAE_15110
Regulator family:	LysR
Regulation mode:	repressor
Biological process:	Carbon dioxide fixation
Effector:
Regulog:	CcmR - Cyanobacteria
Statistics of regulated genes:
- Genes	14
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 72 sites [see more]

Member of regulog collections

By taxonomy - Cyanobacteria
By TF family - LysR
By pathway - Carbon dioxide fixation

Regulated operons
	Locus Tag	Name	Function
Position: -71 Score: 4.9 Sequence: ATAGACTTTTGACTGT Locus tag: MAE_30020 Name: glpX Funciton: Fructose-1,6-bisphosphatase II
	MAE_30020	glpX	Fructose-1,6-bisphosphatase II
Position: -238 Score: 4.3 Sequence: ATAGACAAAACTTTAT Position: -207 Score: 4.9 Sequence: ATTGTTATAAATCTAT Position: -122 Score: 4.9 Sequence: ATTGATTTAAACCTAT Locus tag: MAE_62070 Name: ccmR Funciton: Carbon assimilation transcriptional regulator, LysR family
	MAE_62070	ccmR	Carbon assimilation transcriptional regulator, LysR family
Position: -71 Score: 4.9 Sequence: ATTGACTAGAATCTAT Locus tag: MAE_15110 Name: ccmR Funciton: Carbon assimilation transcriptional regulator, LysR family Locus tag: MAE_15120 Name: ndhF3 Funciton: NADH dehydrogenase subunit F Locus tag: MAE_15130 Name: ecaB2 Funciton: Periplasmic carbonic anhydrase Locus tag: MAE_15140 Name: ndhD3 Funciton: NADH dehydrogenase subunit D
	MAE_15110	ccmR	Carbon assimilation transcriptional regulator, LysR family
	MAE_15120	ndhF3	NADH dehydrogenase subunit F
	MAE_15130	ecaB2	Periplasmic carbonic anhydrase
	MAE_15140	ndhD3	NADH dehydrogenase subunit D
Position: -104 Score: 4.6 Sequence: ATAGCTAAATTTCTAT Locus tag: MAE_19990 Name: cmpA Funciton: Bicarbontate ABC transporter, substrate-binding protein Locus tag: MAE_20000 Name: cmpB Funciton: Bicarbontate ABC transporter, permease protein Locus tag: MAE_20010 Name: cmpC Funciton: Bicarbontate ABC transporter, ATP-binding protein 1 Locus tag: MAE_20020 Name: cmpD Funciton: Bicarbontate ABC transporter, ATP-binding protein 2
	MAE_19990	cmpA	Bicarbontate ABC transporter, substrate-binding protein
	MAE_20000	cmpB	Bicarbontate ABC transporter, permease protein
	MAE_20010	cmpC	Bicarbontate ABC transporter, ATP-binding protein 1
	MAE_20020	cmpD	Bicarbontate ABC transporter, ATP-binding protein 2
Position: -196 Score: 4.7 Sequence: ATAGGTTTAAATCAAT Position: -111 Score: 4.9 Sequence: ATAGATTTATAACAAT Position: -80 Score: 5 Sequence: ATAAAGTTTTGTCTAT Locus tag: MAE_62080 Name: Synpcc7942_2328 Funciton: Predicted permease Locus tag: MAE_62090 Name: sbtA Funciton: High-affinity, low-flux sodium dependent bicarbonate transporter Locus tag: MAE_62100 Name: sbtB Funciton: Predicted membrane protein Locus tag: MAE_62110 Name: nhaS Funciton: Predicted sodium/hydrogen exchanger
	MAE_62080	Synpcc7942_2328	Predicted permease
	MAE_62090	sbtA	High-affinity, low-flux sodium dependent bicarbonate transporter
	MAE_62100	sbtB	Predicted membrane protein
	MAE_62110	nhaS	Predicted sodium/hydrogen exchanger

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD