Orthologous regulated operons containing cupS gene

Properties
Regulog:	CcmR - Cyanobacteria
Regulator type:	Transcription factor
Regulator family:	LysR
Regulation mode:	repressor
Biological process:	Carbon dioxide fixation
Effector:
Phylum:	Cyanobacteria

Built upon 72 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Gloeobacter violaceus PCC 7421
Position: -139 Score: 4.95938 Sequence: ATCTACTTTTATCTAT Locus tag: gvip132 Name: ndhF3 Funciton: NADH dehydrogenase subunit F Locus tag: gvip133 Name: ndhD3 Funciton: NADH dehydrogenase subunit D Locus tag: gvip134 Name: cupA Funciton: CO2 uptake protein Locus tag: glr1006 Name: cupS Funciton: CO2 uptake transporter, small subunit
ndhF3-ndhD3-cupA-cupS	-139	5	ATCTACTTTTATCTAT	gvip132
Nostoc sp. PCC 7120
Position: 34 Score: 4.41159 Sequence: ATAGTTTTAAAACTCT Locus tag: alr1320 Name: cupS Funciton: CO2 uptake transporter, small subunit
cupS	34	4.4	ATAGTTTTAAAACTCT	alr1320
Synechococcus sp. JA-3-3Ab
Position: -107 Score: 5.03875 Sequence: CTTGATTTTTGTCTAT Locus tag: CYA_0640 Name: ndhF3 Funciton: NADH dehydrogenase subunit F Locus tag: CYA_0639 Name: ndhD3 Funciton: NADH dehydrogenase subunit D Locus tag: CYA_0638 Name: cupA Funciton: CO2 uptake protein Locus tag: CYA_0636 Name: cupS Funciton: CO2 uptake transporter, small subunit
ndhF3-ndhD3-cupA-cupS	-107	5	CTTGATTTTTGTCTAT	CYA_0640
Synechococcus sp. PCC 7002
Position: -63 Score: 5.03591 Sequence: ATTGACTCTAGTCTAT Locus tag: SYNPCC7002_A0171 Name: ccmR Funciton: Carbon assimilation transcriptional regulator, LysR family Locus tag: SYNPCC7002_A0172 Name: ndhF3 Funciton: NADH dehydrogenase subunit F Locus tag: SYNPCC7002_A0173 Name: ndhD3 Funciton: NADH dehydrogenase subunit D Locus tag: SYNPCC7002_A0174 Name: cupA Funciton: CO2 uptake protein Locus tag: SYNPCC7002_A0175 Name: cupS Funciton: CO2 uptake transporter, small subunit
ccmR-ndhF3-ndhD3-cupA-cupS	-63	5	ATTGACTCTAGTCTAT	SYNPCC7002_A0171
Synechocystis sp. PCC 6803
Position: -204 Score: 3.87446 Sequence: ATTGTCGCTTGACTAT Locus tag: sll1732 Name: ndhF3 Funciton: NADH dehydrogenase subunit F Locus tag: sll1733 Name: ndhD3 Funciton: NADH dehydrogenase subunit D Locus tag: sll1734 Name: cupA Funciton: CO2 uptake protein Locus tag: sll1735 Name: cupS Funciton: CO2 uptake transporter, small subunit
ndhF3-ndhD3-cupA-cupS	-204	3.9	ATTGTCGCTTGACTAT	sll1732