Regulog Fnr - Enterobacteriales
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | activator (repressor) |
| Biological process: | Energy metabolism; Anaerobic metabolism |
| Effector: | Oxygen |
| Phylum: | Gammaproteobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By TF family - CRP
- By effector - Oxygen
- By pathway - Energy metabolism
- By pathway - Anaerobic metabolism
| Genome | Genes | Operons |
|---|---|---|
| Citrobacter koseri ATCC BAA-895 | 169 | 66 |
| Edwardsiella tarda EIB202 | 101 | 39 |
| Enterobacter sp. 638 | 126 | 54 |
| Erwinia amylovora ATCC 49946 | 43 | 20 |
| Erwinia carotovora subsp. atroseptica SCRI1043 | 132 | 51 |
| Escherichia coli str. K-12 substr. MG1655 | 216 | 82 |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | 145 | 56 |
| Photorhabdus luminescens subsp. laumondii TTO1 | 92 | 37 |
| Proteus mirabilis HI4320 | 122 | 50 |
| Salmonella typhimurium LT2 | 191 | 68 |
| Serratia proteamaculans 568 | 109 | 46 |
| Yersinia pestis KIM | 104 | 46 |
| Genes | Function | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||
| ETAE_2843 |
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Edwardsiella tarda EIB202 Site: position = -271 score = 3.36 sequence = TTATTTTTTATTAA Gene: ETAE_2843: hypothetical protein |
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hypothetical protein |
| dcuB |
Gene: CKO_03748: C4-dicarboxylate transporter DcuB |
Gene: ETAE_2844: C4-dicarboxylate transporter DcuB |
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Enterobacter sp. 638 Site: position = -93 score = 3.63 sequence = TTGAATTTATACAA Gene: Ent638_2479: C4-dicarboxylate transporter DcuB |
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Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -279 score = 3.7 sequence = TTTATTTTCATGAA Site: position = -243 score = 4.5 sequence = TAGATTTAGATCAA Gene: ECA1533: C4-dicarboxylate transporter DcuB |
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Escherichia coli str. K-12 substr. MG1655 Site: position = -283 score = 3.96 sequence = CCGATAAATATCAA Gene: b4123: C4-dicarboxylate transporter DcuB |
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Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -210 score = 3.4 sequence = TCTACTCATATCAA Gene: KPN_04367: C4-dicarboxylate transporter DcuB |
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Proteus mirabilis HI4320 Site: position = -78 score = 3.43 sequence = TTGTTTTTTTGCAA Gene: PMI0389: C4-dicarboxylate transporter DcuB |
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Salmonella typhimurium LT2 Site: position = -72 score = 3.53 sequence = TTCACAAAAATCAG Gene: STM4301: C4-dicarboxylate transporter DcuB |
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Serratia proteamaculans 568 Site: position = -189 score = 3.85 sequence = CAGATTAAAATCAA Gene: Spro_3863: C4-dicarboxylate transporter DcuB |
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Yersinia pestis KIM Site: position = -239 score = 3.39 sequence = TTAATTTAAAGCAC Gene: y0901: C4-dicarboxylate transporter DcuB |
C4-dicarboxylate transporter DcuB |
| fumB |
Gene: CKO_03749: Fumarate hydratase class I, anaerobic (EC 4.2.1.2) |
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Gene: b4122: Fumarate hydratase class I, anaerobic (EC 4.2.1.2) |
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Gene: STM4300: Fumarate hydratase class I, anaerobic (EC 4.2.1.2) |
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Fumarate hydratase class I, anaerobic (EC 4.2.1.2) |
| CRON 2. | |||||||||||||
| katG |
Gene: CKO_03050: Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) |
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Gene: Ent638_4032: Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) |
Gene: EAM_2086: Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) |
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Escherichia coli str. K-12 substr. MG1655 Site: position = -126 score = 3.76 sequence = TTGATCTACATCTC Site: position = -141 score = 4.42 sequence = TTAATTAAGATCAA Gene: b3942: Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) |
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Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -248 score = 4.09 sequence = TTGTCATATCTCAA Gene: KPN_01819: Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) |
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Salmonella typhimurium LT2 Site: position = -126 score = 3.76 sequence = TTGATCTACATCTC Gene: STM4106: Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) |
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Serratia proteamaculans 568 Site: position = -139 score = 3.68 sequence = TTATTTAAAATCAG Gene: Spro_3192: Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) |
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Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) |
| CRON 3. | |||||||||||||
| pstS |
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Citrobacter koseri ATCC BAA-895 Site: position = -243 score = 4.41 sequence = CTGTTTTTAATCAA Gene: CKO_00065: Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) |
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Edwardsiella tarda EIB202 Site: position = -93 score = 3.75 sequence = TTTACTGTCATCAA Gene: ETAE_3538: Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) |
Gene: Ent638_4137: Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) |
Gene: EAM_3467: Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) |
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Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -52 score = 3.61 sequence = CTGATTGATAACGA Gene: ECA4477: Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) |
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Escherichia coli str. K-12 substr. MG1655 Site: position = -138 score = 3.85 sequence = CTTATTTAAATCAG Gene: b3728: Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) |
Gene: KPN_04133: Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) |
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Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -33 score = 3.86 sequence = TTGTTGATTCTCAA Gene: plu0214: Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) |
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Proteus mirabilis HI4320 Site: position = -46 score = 4.04 sequence = TTGATAGATGTCGA Gene: PMI2893: Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) |
Gene: STM3857: Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) |
Gene: Spro_0012: Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) |
Gene: y4131: Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) |
Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) |
| pstC |
Gene: CKO_00064: Phosphate transport system permease protein PstC (TC 3.A.1.7.1) |
Gene: ETAE_3539: Phosphate transport system permease protein PstC (TC 3.A.1.7.1) |
Gene: Ent638_4138: Phosphate transport system permease protein PstC (TC 3.A.1.7.1) |
Gene: EAM_3466: Phosphate transport system permease protein PstC (TC 3.A.1.7.1) |
Gene: ECA4476: Phosphate transport system permease protein PstC (TC 3.A.1.7.1) |
Gene: b3727: Phosphate transport system permease protein PstC (TC 3.A.1.7.1) |
Gene: KPN_04132: Phosphate transport system permease protein PstC (TC 3.A.1.7.1) |
Gene: plu0215: Phosphate transport system permease protein PstC (TC 3.A.1.7.1) |
Gene: PMI2894: Phosphate transport system permease protein PstC (TC 3.A.1.7.1) |
Gene: STM3856: Phosphate transport system permease protein PstC (TC 3.A.1.7.1) |
Gene: Spro_0013: Phosphate transport system permease protein PstC (TC 3.A.1.7.1) |
Gene: y4130: Phosphate transport system permease protein PstC (TC 3.A.1.7.1) |
Phosphate transport system permease protein PstC (TC 3.A.1.7.1) |
| pstA |
Gene: CKO_00063: Phosphate transport system permease protein PstA (TC 3.A.1.7.1) |
Gene: ETAE_3540: Phosphate transport system permease protein PstA (TC 3.A.1.7.1) |
Gene: Ent638_4139: Phosphate transport system permease protein PstA (TC 3.A.1.7.1) |
Gene: EAM_3465: Phosphate transport system permease protein PstA (TC 3.A.1.7.1) |
Gene: ECA4475: Phosphate transport system permease protein PstA (TC 3.A.1.7.1) |
Gene: b3726: Phosphate transport system permease protein PstA (TC 3.A.1.7.1) |
Gene: KPN_04131: Phosphate transport system permease protein PstA (TC 3.A.1.7.1) |
Gene: plu0216: Phosphate transport system permease protein PstA (TC 3.A.1.7.1) |
Gene: PMI2895: Phosphate transport system permease protein PstA (TC 3.A.1.7.1) |
Gene: STM3855: Phosphate transport system permease protein PstA (TC 3.A.1.7.1) |
Gene: Spro_0014: Phosphate transport system permease protein PstA (TC 3.A.1.7.1) |
Gene: y4129: Phosphate transport system permease protein PstA (TC 3.A.1.7.1) |
Phosphate transport system permease protein PstA (TC 3.A.1.7.1) |
| pstB |
Gene: CKO_00062: Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) |
Gene: ETAE_3541: Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) |
Gene: Ent638_4140: Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) |
Gene: EAM_3464: Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) |
Gene: ECA4474: Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) |
Gene: b3725: Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) |
Gene: KPN_04130: Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) |
Gene: plu0217: Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) |
Gene: PMI2896: Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) |
Gene: STM3854: Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) |
Gene: Spro_0015: Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) |
Gene: y4128: Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) |
Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) |
| phoU |
Gene: CKO_00061: Phosphate transport system regulatory protein PhoU |
Gene: ETAE_3542: Phosphate transport system regulatory protein PhoU |
Gene: Ent638_4141: Phosphate transport system regulatory protein PhoU |
Gene: EAM_3463: Phosphate transport system regulatory protein PhoU |
Gene: ECA4473: Phosphate transport system regulatory protein PhoU |
Gene: b3724: Phosphate transport system regulatory protein PhoU |
Gene: KPN_04129: Phosphate transport system regulatory protein PhoU |
Gene: plu0218: Phosphate transport system regulatory protein PhoU |
Gene: PMI2897: Phosphate transport system regulatory protein PhoU |
Gene: STM3853: Phosphate transport system regulatory protein PhoU |
Gene: Spro_0016: Phosphate transport system regulatory protein PhoU |
Gene: y4127: Phosphate transport system regulatory protein PhoU |
Phosphate transport system regulatory protein PhoU |
| CRON 4. | |||||||||||||
| pitA |
Gene: CKO_04941: Phosphate transporter, low-affinity |
Gene: ETAE_3347: Phosphate transporter, low-affinity |
Gene: Ent638_3907: Phosphate transporter, low-affinity |
Gene: EAM_3323: Phosphate transporter, low-affinity |
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Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -140 score = 4.04 sequence = TTGATTTATATTGA Gene: ECA0048: Phosphate transporter, low-affinity |
*2
Escherichia coli str. K-12 substr. MG1655 Site: position = -116 score = 3.77 sequence = TTGAGTGAAATCCA Gene: b3493: Phosphate transporter, low-affinity Gene: b2987: Phosphate transporter, low-affinity |
Gene: KPN_03858: Phosphate transporter, low-affinity |
Gene: plu0119: Phosphate transporter, low-affinity |
Gene: PMI3011: Phosphate transporter, low-affinity |
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Salmonella typhimurium LT2 Site: position = -116 score = 4.16 sequence = GTGATATCAAACAA Gene: STM3589: Phosphate transporter, low-affinity |
Gene: Spro_4689: Phosphate transporter, low-affinity |
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Yersinia pestis KIM Site: position = -201 score = 4.1 sequence = TTGAATAAAATCAT Gene: y3862: Phosphate transporter, low-affinity |
Phosphate transporter, low-affinity |
| CRON 5. | |||||||||||||
| ydhY |
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Citrobacter koseri ATCC BAA-895 Site: position = -162 score = 4.71 sequence = TTGATAACGATCAA Gene: CKO_01699: Predicted oxidoreductase, Fe-S subunit |
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Escherichia coli str. K-12 substr. MG1655 Site: position = -214 score = 4.71 sequence = TTGATAACGATCAA Site: position = -60 score = 3.71 sequence = ATGCTTAATATCAG Gene: b1674: Predicted oxidoreductase, Fe-S subunit |
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Proteus mirabilis HI4320 Site: position = -92 score = 3.74 sequence = TTTATATACAACGA Gene: PMI0070: Predicted oxidoreductase, Fe-S subunit |
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Predicted oxidoreductase, Fe-S subunit |
| ydhV |
Gene: CKO_01698: Predicted oxidoreductase subunit |
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Gene: b1673: Predicted oxidoreductase subunit |
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Gene: PMI0069: Predicted oxidoreductase subunit |
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Predicted oxidoreductase subunit |
| ydhW |
Gene: CKO_01697: Predicted oxidoreductase subunit |
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Gene: b1672: Predicted oxidoreductase subunit |
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Gene: PMI0068: Predicted oxidoreductase subunit |
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Predicted oxidoreductase subunit |
| ydhX |
Gene: CKO_01696: Predicted oxidoreductase, Fe-S subunit |
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Gene: b1671: Predicted oxidoreductase, Fe-S subunit |
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Gene: PMI0067: Predicted oxidoreductase, Fe-S subunit |
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Predicted oxidoreductase, Fe-S subunit |
| ydhU |
Gene: CKO_01695: Predicted oxidoreductase subunit |
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Gene: b1670: Predicted oxidoreductase subunit |
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Gene: PMI0066: Predicted oxidoreductase subunit |
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Predicted oxidoreductase subunit |
| ydhT |
Gene: CKO_01694: Predicted oxidoreductase subunit |
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Gene: b1669: Predicted oxidoreductase subunit |
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Gene: PMI0065: Predicted oxidoreductase subunit |
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Predicted oxidoreductase subunit |
| CRON 6. | |||||||||||||
| uxaC |
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Citrobacter koseri ATCC BAA-895 Site: position = -43 score = 3.78 sequence = TTGATCCAACTCAC Gene: CKO_04494: Uronate isomerase (EC 5.3.1.12) |
Gene: ETAE_0436: Uronate isomerase (EC 5.3.1.12) |
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Enterobacter sp. 638 Site: position = -105 score = 4.19 sequence = TTGATCTAACTCAC Gene: Ent638_3546: Uronate isomerase (EC 5.3.1.12) |
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Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -225 score = 3.88 sequence = TTGAGTGATATCAC Gene: ECA0645: Uronate isomerase (EC 5.3.1.12) |
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Escherichia coli str. K-12 substr. MG1655 Site: position = -106 score = 4.19 sequence = TTGATCTAACTCAC Gene: b3092: Uronate isomerase (EC 5.3.1.12) |
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Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -125 score = 4.19 sequence = TTGATCTAACTCAC Gene: KPN_03520: Uronate isomerase (EC 5.3.1.12) |
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Serratia proteamaculans 568 Site: position = -227 score = 3.88 sequence = TTGAGTGATATCAC Gene: Spro_4321: Uronate isomerase (EC 5.3.1.12) |
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Yersinia pestis KIM Site: position = -225 score = 3.85 sequence = TTGAGTGACATCAC Gene: y3600: Uronate isomerase (EC 5.3.1.12) |
Uronate isomerase (EC 5.3.1.12) |
| uxaB |
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Gene: ETAE_0437: Altronate oxidoreductase (EC 1.1.1.58) |
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Gene: ECA0646: Altronate oxidoreductase (EC 1.1.1.58) |
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Gene: y3599: Altronate oxidoreductase (EC 1.1.1.58) |
Altronate oxidoreductase (EC 1.1.1.58) |
| uxaA |
Gene: CKO_04493: Altronate hydrolase (EC 4.2.1.7) |
Gene: ETAE_0438: Altronate hydrolase (EC 4.2.1.7) |
Gene: Ent638_3545: Altronate hydrolase (EC 4.2.1.7) |
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Gene: ECA0647: Altronate hydrolase (EC 4.2.1.7) |
Gene: b3091: Altronate hydrolase (EC 4.2.1.7) |
Gene: KPN_03519: Altronate hydrolase (EC 4.2.1.7) |
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Gene: Spro_4320: Altronate hydrolase (EC 4.2.1.7) |
Gene: y3598: Altronate hydrolase (EC 4.2.1.7) |
Altronate hydrolase (EC 4.2.1.7) |
| CRON 7. | |||||||||||||
| ysgA |
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Citrobacter koseri ATCC BAA-895 Site: position = -133 score = 4.07 sequence = GTGATTTACATCAC Gene: CKO_00172: Predcited carboxymethylenebutenolidase (EC 3.1.1.45) |
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Gene: Ent638_3963: Predcited carboxymethylenebutenolidase (EC 3.1.1.45) |
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Erwinia amylovora ATCC 49946 Site: position = -199 score = 3.6 sequence = TTAATCAAAATGAA Gene: EAM_0199: Predcited carboxymethylenebutenolidase (EC 3.1.1.45) |
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Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -155 score = 3.77 sequence = GTGACTTAAATCAC Gene: ECA0184: Predcited carboxymethylenebutenolidase (EC 3.1.1.45) |
Gene: b3830: Predcited carboxymethylenebutenolidase (EC 3.1.1.45) |
Gene: KPN_04326: Predcited carboxymethylenebutenolidase (EC 3.1.1.45) |
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Salmonella typhimurium LT2 Site: position = -169 score = 4.22 sequence = ATGACGTAAAACAA Gene: STM3967: Predcited carboxymethylenebutenolidase (EC 3.1.1.45) |
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Serratia proteamaculans 568 Site: position = -174 score = 3.77 sequence = TTAATGCAGGTCAA Gene: Spro_0243: Predcited carboxymethylenebutenolidase (EC 3.1.1.45) |
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Yersinia pestis KIM Site: position = -296 score = 4.19 sequence = GTGATTTAAATCAC Gene: y0443: Predcited carboxymethylenebutenolidase (EC 3.1.1.45) |
Predcited carboxymethylenebutenolidase (EC 3.1.1.45) |
| CRON 8. | |||||||||||||
| hyfA |
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Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -91 score = 3.47 sequence = TTGAATTAAAGAAA Gene: ECA1247: Hydrogenase-4 component A (EC 1.-.-.-) |
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Escherichia coli str. K-12 substr. MG1655 Site: position = -29 score = 3.78 sequence = ATGTTTCATATCAT Gene: b2481: Hydrogenase-4 component A (EC 1.-.-.-) |
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Proteus mirabilis HI4320 Site: position = -114 score = 4.88 sequence = TTGATTTTTAACAA Gene: PMI2528: Hydrogenase-4 component A (EC 1.-.-.-) |
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Hydrogenase-4 component A (EC 1.-.-.-) |
| hyfB |
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Gene: ECA1246: Hydrogenase-4 component B (EC 1.-.-.-) / Formate hydrogenlyase subunit 3 |
Gene: b2482: Hydrogenase-4 component B (EC 1.-.-.-) / Formate hydrogenlyase subunit 3 |
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Gene: PMI2527: Hydrogenase-4 component B (EC 1.-.-.-) / Formate hydrogenlyase subunit 3 |
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Hydrogenase-4 component B (EC 1.-.-.-) / Formate hydrogenlyase subunit 3 |
| hycD |
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Gene: ECA1245: Hydrogenase-4 component C (EC 1.-.-.-) |
Gene: b2483: Hydrogenase-4 component C (EC 1.-.-.-) |
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Gene: PMI2526: Hydrogenase-4 component C (EC 1.-.-.-) |
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Hydrogenase-4 component C (EC 1.-.-.-) |
| hyfD |
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Gene: ECA1244: Hydrogenase-4 component D (EC 1.-.-.-) |
Gene: b2484: Hydrogenase-4 component D (EC 1.-.-.-) |
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Gene: PMI2525: Hydrogenase-4 component D (EC 1.-.-.-) |
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Hydrogenase-4 component D (EC 1.-.-.-) |
| hyfE |
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Gene: ECA1243: Hydrogenase-4 component E (EC 1.-.-.-) |
Gene: b2485: Hydrogenase-4 component E (EC 1.-.-.-) |
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Gene: PMI2524: Hydrogenase-4 component E (EC 1.-.-.-) |
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Hydrogenase-4 component E (EC 1.-.-.-) |
| hyfF |
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Gene: ECA1242: Hydrogenase-4 component F (EC 1.-.-.-) |
Gene: b2486: Hydrogenase-4 component F (EC 1.-.-.-) |
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Gene: PMI2523: Hydrogenase-4 component F (EC 1.-.-.-) |
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Hydrogenase-4 component F (EC 1.-.-.-) |
| hyfG |
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Gene: ECA1241: Hydrogenase-4 component G (EC 1.-.-.-) |
Gene: b2487: Hydrogenase-4 component G (EC 1.-.-.-) |
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Gene: PMI2522: Hydrogenase-4 component G (EC 1.-.-.-) |
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Hydrogenase-4 component G (EC 1.-.-.-) |
| hyfH |
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Gene: ECA1240: Hydrogenase-4 component H (EC 1.-.-.-) |
Gene: b2488: Hydrogenase-4 component H (EC 1.-.-.-) |
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Gene: PMI2521: Hydrogenase-4 component H (EC 1.-.-.-) |
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Hydrogenase-4 component H (EC 1.-.-.-) |
| hyfI |
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Gene: ECA1239: Hydrogenase-4 component I (EC 1.-.-.-) |
Gene: b2489: Hydrogenase-4 component I (EC 1.-.-.-) |
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Gene: PMI2520: Hydrogenase-4 component I (EC 1.-.-.-) |
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Hydrogenase-4 component I (EC 1.-.-.-) |
| hyfJ |
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Gene: ECA1238: Hydrogenase-4 component J (EC 1.-.-.-) |
Gene: b2490: Hydrogenase-4 component J (EC 1.-.-.-) |
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Gene: PMI2519: Hydrogenase-4 component J (EC 1.-.-.-) |
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Hydrogenase-4 component J (EC 1.-.-.-) |
| hyfR |
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*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -98 score = 4.14 sequence = TTGTGTCAGATCAA Gene: ECA1236: Formate hydrogenlyase transcriptional activator |
Gene: b2491: Formate hydrogenlyase transcriptional activator |
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Proteus mirabilis HI4320 Site: position = -64 score = 3.86 sequence = TTGATATAAATTTA Gene: PMI3580: Formate hydrogenlyase transcriptional activator |
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Formate hydrogenlyase transcriptional activator |
| focB |
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Gene: b2492: Formate efflux transporter (TC 2.A.44 family) |
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Formate efflux transporter (TC 2.A.44 family) |
| CRON 9. | |||||||||||||
| ydeJ |
Gene: CKO_04051: Competence/damage-inducible protein CinA |
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Edwardsiella tarda EIB202 Site: position = -5 score = 3.43 sequence = TCGCTATGGAACAA Gene: ETAE_2862: Competence/damage-inducible protein CinA |
*2
Enterobacter sp. 638 Gene: Ent638_3175: Competence/damage-inducible protein CinA Site: position = -81 score = 4.08 sequence = TTCAGTAAAATCAA Gene: Ent638_3132: Competence/damage-inducible protein CinA |
Gene: EAM_2641: Competence/damage-inducible protein CinA |
Gene: ECA3370: Competence/damage-inducible protein CinA |
*2
Escherichia coli str. K-12 substr. MG1655 Gene: b2700: Competence/damage-inducible protein CinA Site: position = -195 score = 3.54 sequence = TTGTTATAAGGCAT Site: position = 7 score = 3.54 sequence = TTAATAGAGATAAA Gene: b1537: Competence/damage-inducible protein CinA |
*2
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_01597: Competence/damage-inducible protein CinA Site: position = -26 score = 3.49 sequence = TTTATCCAGAGCAA Gene: KPN_03032: Competence/damage-inducible protein CinA |
Gene: plu1248: Competence/damage-inducible protein CinA |
*
Proteus mirabilis HI4320 Site: position = -19 score = 3.49 sequence = TCGAGGTGAAACAA Gene: PMI0374: Competence/damage-inducible protein CinA |
*2
Salmonella typhimurium LT2 Site: position = -238 score = 3.56 sequence = GTCATATGCATCAA Gene: STM1514: Competence/damage-inducible protein CinA Site: position = -347 score = 3.35 sequence = TTGACCGCCGTCAT Gene: STM2830: Competence/damage-inducible protein CinA |
Gene: Spro_0840: Competence/damage-inducible protein CinA |
*
Yersinia pestis KIM Site: position = -297 score = 3.65 sequence = TTGATCGCAGTTAA Gene: y0880: Competence/damage-inducible protein CinA |
Competence/damage-inducible protein CinA |
| CRON 10. | |||||||||||||
| nqrA |
|
|
|
|
|
|
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = 0 score = 4.17 sequence = ATGATTAAAATCAC Gene: KPN_00239: Na-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -205 score = 4.05 sequence = TTGAACTAAATCAC Gene: plu1196: Na-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-) |
*
Proteus mirabilis HI4320 Site: position = -205 score = 4.19 sequence = TTGAGCTAAATCAC Gene: PMI0352: Na-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-) |
|
*
Serratia proteamaculans 568 Site: position = 0 score = 4.33 sequence = ATGATTAAAATCAG Gene: Spro_0953: Na-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-) |
*
Yersinia pestis KIM Site: position = 18 score = 4.19 sequence = ATGATTAAAATAAA Gene: y0951: Na-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-) |
Na-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-) |
| nqrB |
|
|
|
|
|
|
Gene: KPN_00240: Na-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-) |
Gene: plu1197: Na-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-) |
Gene: PMI0353: Na-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-) |
|
Gene: Spro_0954: Na-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-) |
Gene: y0952: Na-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-) |
Na-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-) |
| nqrC |
|
|
|
|
|
|
Gene: KPN_00241: Na-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-) |
Gene: plu1198: Na-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-) |
Gene: PMI0354: Na-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-) |
|
Gene: Spro_0955: Na-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-) |
Gene: y0953: Na-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-) |
Na-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-) |
| nqrD |
|
|
|
|
|
|
Gene: KPN_00242: Na-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-) |
Gene: plu1199: Na-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-) |
Gene: PMI0355: Na-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-) |
|
Gene: Spro_0956: Na-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-) |
Gene: y0954: Na-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-) |
Na-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-) |
| nqrE |
|
|
|
|
|
|
Gene: KPN_00243: Na-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-) |
Gene: plu1200: Na-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-) |
Gene: PMI0356: Na-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-) |
|
Gene: Spro_0957: Na-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-) |
Gene: y0955: Na-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-) |
Na-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-) |
| nqrF |
|
|
|
|
|
|
Gene: KPN_00244: Na-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-) |
Gene: plu1201: Na-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-) |
Gene: PMI0357: Na-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-) |
|
Gene: Spro_0958: Na-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-) |
Gene: y0956: Na-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-) |
Na-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-) |
| CRON 11. | |||||||||||||
| adhE |
*
Citrobacter koseri ATCC BAA-895 Site: position = -238 score = 4.13 sequence = TTGATCTGGATCAC Gene: CKO_01318: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
Gene: ETAE_1508: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
*
Enterobacter sp. 638 Site: position = -249 score = 4.47 sequence = TTGATTCAGATCAT Gene: Ent638_2304: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
|
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -311 score = 3.61 sequence = TCGATGTTGATCAC Site: position = -305 score = 3.82 sequence = TTGATCACAAAAAA Gene: ECA2326: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -237 score = 4.27 sequence = TTGATTTGGATCAC Gene: b1241: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -233 score = 4.71 sequence = TTGATCTAAATCAC Gene: KPN_02199: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -134 score = 4.48 sequence = GTGATTAAGATCAA Gene: plu2496: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
*
Proteus mirabilis HI4320 Site: position = -242 score = 3.84 sequence = GTGATGTAGATCAC Gene: PMI1486: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
*
Salmonella typhimurium LT2 Site: position = -238 score = 4.7 sequence = TTGATTTAGATCAC Gene: STM1749: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
*
Serratia proteamaculans 568 Site: position = -274 score = 4.44 sequence = ATGATTTAAATCAC Gene: Spro_2704: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
Gene: y2023: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
| CRON 12. | |||||||||||||
| feoA |
*
Citrobacter koseri ATCC BAA-895 Site: position = -204 score = 4.09 sequence = TTGAGCCATGTCAA Gene: CKO_04830: Ferrous iron transport protein A |
Gene: ETAE_3283: Ferrous iron transport protein A |
*
Enterobacter sp. 638 Site: position = -133 score = 4.17 sequence = TTGAGCAAGGTCAA Gene: Ent638_3821: Ferrous iron transport protein A |
|
|
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -203 score = 4.37 sequence = TTGAGCCACATCAA Gene: b3408: Ferrous iron transport protein A |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -198 score = 3.81 sequence = TTGCGGCATATCAA Gene: KPN_03778: Ferrous iron transport protein A |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -206 score = 3.51 sequence = TGGATGCAAATCAT Gene: plu0209: Ferrous iron transport protein A |
*
Proteus mirabilis HI4320 Site: position = -190 score = 5.24 sequence = TTGATGTACATCAA Gene: PMI2920: Ferrous iron transport protein A |
*
Salmonella typhimurium LT2 Site: position = -204 score = 4.4 sequence = TTGAGCCATATCAA Gene: STM3505: Ferrous iron transport protein A |
*
Serratia proteamaculans 568 Site: position = -284 score = 3.8 sequence = CTGATTTAACTCAC Gene: Spro_4628: Ferrous iron transport protein A |
*
Yersinia pestis KIM Site: position = -93 score = 3.99 sequence = ATTATTTAAATCAT Gene: y3912: Ferrous iron transport protein A |
Ferrous iron transport protein A |
| feoB |
Gene: CKO_04831: Ferrous iron transport protein B |
Gene: ETAE_3284: Ferrous iron transport protein B |
Gene: Ent638_3822: Ferrous iron transport protein B |
|
|
Gene: b3409: Ferrous iron transport protein B |
Gene: KPN_03779: Ferrous iron transport protein B |
Gene: plu0208: Ferrous iron transport protein B |
Gene: PMI2921: Ferrous iron transport protein B |
Gene: STM3506: Ferrous iron transport protein B |
Gene: Spro_4629: Ferrous iron transport protein B |
Gene: y3911: Ferrous iron transport protein B |
Ferrous iron transport protein B |
| feoC |
Gene: CKO_04832: Ferrous iron-sensisng transcriptional regulator FeoC, FeoC family |
Gene: ETAE_3285: Ferrous iron-sensisng transcriptional regulator FeoC, FeoC family |
Gene: Ent638_3823: Ferrous iron-sensisng transcriptional regulator FeoC, FeoC family |
|
|
Gene: b3410: Ferrous iron-sensisng transcriptional regulator FeoC, FeoC family |
Gene: KPN_03780: Ferrous iron-sensisng transcriptional regulator FeoC, FeoC family |
Gene: plu0207: Ferrous iron-sensisng transcriptional regulator FeoC, FeoC family |
Gene: PMI2922: Ferrous iron-sensisng transcriptional regulator FeoC, FeoC family |
Gene: STM3507: Ferrous iron-sensisng transcriptional regulator FeoC, FeoC family |
Gene: Spro_4630: Ferrous iron-sensisng transcriptional regulator FeoC, FeoC family |
Gene: y3910: Ferrous iron-sensisng transcriptional regulator FeoC, FeoC family |
Ferrous iron-sensisng transcriptional regulator FeoC, FeoC family |
| CRON 13. | |||||||||||||
| nirB |
*
Citrobacter koseri ATCC BAA-895 Site: position = -72 score = 5.44 sequence = TTGATTTACATCAA Gene: CKO_04789: Nitrite reductase, large subunit (EC 1.7.1.4) |
|
*
Enterobacter sp. 638 Site: position = -72 score = 5.01 sequence = TTGATTTGCATCAA Gene: Ent638_3793: Nitrite reductase, large subunit (EC 1.7.1.4) |
|
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -71 score = 5.34 sequence = TTGATATACATCAA Gene: ECA4079: Nitrite reductase, large subunit (EC 1.7.1.4) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -72 score = 5.44 sequence = TTGATTTACATCAA Gene: b3365: Nitrite reductase, large subunit (EC 1.7.1.4) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -72 score = 5.01 sequence = TTGATTTGCATCAA Gene: KPN_03752: Nitrite reductase, large subunit (EC 1.7.1.4) |
|
*
Proteus mirabilis HI4320 Site: position = -72 score = 5.06 sequence = TTGATATTCATCAA Gene: PMI1479: Nitrite reductase, large subunit (EC 1.7.1.4) |
*
Salmonella typhimurium LT2 Site: position = -72 score = 5.44 sequence = TTGATTTACATCAA Gene: STM3474: Nitrite reductase, large subunit (EC 1.7.1.4) |
*
Serratia proteamaculans 568 Site: position = -72 score = 5.01 sequence = TTGATTTGCATCAA Gene: Spro_4595: Nitrite reductase, large subunit (EC 1.7.1.4) |
*
Yersinia pestis KIM Site: position = -71 score = 5.44 sequence = TTGATTTACATCAA Gene: y3945: Nitrite reductase, large subunit (EC 1.7.1.4) |
Nitrite reductase, large subunit (EC 1.7.1.4) |
| nirD |
Gene: CKO_04790: Nitrite reductase, small subunit (EC 1.7.1.4) |
|
Gene: Ent638_3794: Nitrite reductase, small subunit (EC 1.7.1.4) |
|
Gene: ECA4080: Nitrite reductase, small subunit (EC 1.7.1.4) |
Gene: b3366: Nitrite reductase, small subunit (EC 1.7.1.4) |
Gene: KPN_03753: Nitrite reductase, small subunit (EC 1.7.1.4) |
|
Gene: PMI1478: Nitrite reductase, small subunit (EC 1.7.1.4) |
Gene: STM3475: Nitrite reductase, small subunit (EC 1.7.1.4) |
Gene: Spro_4596: Nitrite reductase, small subunit (EC 1.7.1.4) |
Gene: y3944: Nitrite reductase, small subunit (EC 1.7.1.4) |
Nitrite reductase, small subunit (EC 1.7.1.4) |
| nirC |
Gene: CKO_04791: Nitrite transporter |
|
Gene: Ent638_3795: Nitrite transporter |
|
|
Gene: b3367: Nitrite transporter |
|
|
|
Gene: STM3476: Nitrite transporter |
Gene: Spro_4597: Nitrite transporter |
Gene: y3942: Nitrite transporter |
Nitrite transporter |
| cysG |
Gene: CKO_04792: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
|
Gene: Ent638_3796: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
|
Gene: ECA4081: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
Gene: b3368: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
Gene: KPN_03754: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
|
Gene: PMI1477: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
Gene: STM3477: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
Gene: Spro_4598: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
Gene: y3941: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
| CRON 14. | |||||||||||||
| citA |
*
Citrobacter koseri ATCC BAA-895 Site: position = -216 score = 4.08 sequence = TTGATTTATTTCAC Gene: CKO_02540: Anaerobic citrate fermentation two-component regulatory system sensor kinase CitA (EC 2.7.3.-) |
|
|
|
|
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -213 score = 4.08 sequence = TTGATTTATTTCAC Gene: b0619: Anaerobic citrate fermentation two-component regulatory system sensor kinase CitA (EC 2.7.3.-) |
|
|
|
*
Salmonella typhimurium LT2 Site: position = -216 score = 4.08 sequence = TTGATTTATTTCAC Gene: STM0625: Anaerobic citrate fermentation two-component regulatory system sensor kinase CitA (EC 2.7.3.-) |
|
|
Anaerobic citrate fermentation two-component regulatory system sensor kinase CitA (EC 2.7.3.-) |
| citB |
Gene: CKO_02539: Anaerobic citrate fermentation two-component regulatory system, response regulator CitB, OmpR family |
|
|
|
|
Gene: b0620: Anaerobic citrate fermentation two-component regulatory system, response regulator CitB, OmpR family |
|
|
|
Gene: STM0626: Anaerobic citrate fermentation two-component regulatory system, response regulator CitB, OmpR family |
|
|
Anaerobic citrate fermentation two-component regulatory system, response regulator CitB, OmpR family |
| CRON 15. | |||||||||||||
| narK |
*
Citrobacter koseri ATCC BAA-895 Site: position = -229 score = 5.47 sequence = TTGATTTATATCAA Gene: CKO_01299: Nitrate/nitrite antiporter |
|
Gene: Ent638_2316: Nitrate/nitrite antiporter |
|
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -82 score = 5.01 sequence = TTGATTTGCATCAA Gene: ECA2030: Nitrate/nitrite antiporter |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -111 score = 4.69 sequence = ATGATAAATATCAA Site: position = -73 score = 5.44 sequence = TTGATTTACATCAA Gene: b1223: Nitrate/nitrite antiporter |
Gene: KPN_02215: Nitrate/nitrite antiporter |
|
*
Proteus mirabilis HI4320 Site: position = -73 score = 4.27 sequence = Gene: PMI3570: Nitrate/nitrite antiporter |
*
Salmonella typhimurium LT2 Site: position = -73 score = 5.47 sequence = TTGATTTATATCAA Gene: STM1765: Nitrate/nitrite antiporter |
*
Serratia proteamaculans 568 Site: position = -75 score = 5.44 sequence = Gene: Spro_2898: Nitrate/nitrite antiporter |
|
Nitrate/nitrite antiporter |
| narG |
*
Citrobacter koseri ATCC BAA-895 Site: position = -105 score = 4.69 sequence = TTGATCGTTATCAA Gene: CKO_01301: Respiratory nitrate reductase alpha chain (EC 1.7.99.4) |
|
*
Enterobacter sp. 638 Site: position = -100 score = 4.69 sequence = TTGATCGTTATCAA Gene: Ent638_2315: Respiratory nitrate reductase alpha chain (EC 1.7.99.4) |
|
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -141 score = 4.69 sequence = TTGATCGTTATCAA Gene: ECA2031: Respiratory nitrate reductase alpha chain (EC 1.7.99.4) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -105 score = 4.69 sequence = TTGATCGTTATCAA Gene: b1224: Respiratory nitrate reductase alpha chain (EC 1.7.99.4) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -106 score = 4.64 sequence = TTGATCGCTATCAA Gene: KPN_02214: Respiratory nitrate reductase alpha chain (EC 1.7.99.4) |
|
Gene: PMI3571: Respiratory nitrate reductase alpha chain (EC 1.7.99.4) |
*
Salmonella typhimurium LT2 Site: position = -105 score = 4.69 sequence = TTGATCGTTATCAA Gene: STM1764: Respiratory nitrate reductase alpha chain (EC 1.7.99.4) |
*
Serratia proteamaculans 568 Site: position = -140 score = 4.73 sequence = TTGATCGCAATCAA Gene: Spro_2883: Respiratory nitrate reductase alpha chain (EC 1.7.99.4) |
|
Respiratory nitrate reductase alpha chain (EC 1.7.99.4) |
| narH |
Gene: CKO_01302: Respiratory nitrate reductase beta chain (EC 1.7.99.4) |
|
Gene: Ent638_2314: Respiratory nitrate reductase beta chain (EC 1.7.99.4) |
|
Gene: ECA2032: Respiratory nitrate reductase beta chain (EC 1.7.99.4) |
Gene: b1225: Respiratory nitrate reductase beta chain (EC 1.7.99.4) |
Gene: KPN_02213: Respiratory nitrate reductase beta chain (EC 1.7.99.4) |
|
Gene: PMI3572: Respiratory nitrate reductase beta chain (EC 1.7.99.4) |
Gene: STM1763: Respiratory nitrate reductase beta chain (EC 1.7.99.4) |
Gene: Spro_2882: Respiratory nitrate reductase beta chain (EC 1.7.99.4) |
|
Respiratory nitrate reductase beta chain (EC 1.7.99.4) |
| narJ |
Gene: CKO_01303: Respiratory nitrate reductase delta chain (EC 1.7.99.4) |
|
Gene: Ent638_2313: Respiratory nitrate reductase delta chain (EC 1.7.99.4) |
|
Gene: ECA2033: Respiratory nitrate reductase delta chain (EC 1.7.99.4) |
Gene: b1226: Respiratory nitrate reductase delta chain (EC 1.7.99.4) |
Gene: KPN_02212: Respiratory nitrate reductase delta chain (EC 1.7.99.4) |
|
Gene: PMI3573: Respiratory nitrate reductase delta chain (EC 1.7.99.4) |
Gene: STM1762: Respiratory nitrate reductase delta chain (EC 1.7.99.4) |
Gene: Spro_2881: Respiratory nitrate reductase delta chain (EC 1.7.99.4) |
|
Respiratory nitrate reductase delta chain (EC 1.7.99.4) |
| narI |
Gene: CKO_01304: Respiratory nitrate reductase gamma chain (EC 1.7.99.4) |
|
Gene: Ent638_2312: Respiratory nitrate reductase gamma chain (EC 1.7.99.4) |
|
Gene: ECA2034: Respiratory nitrate reductase gamma chain (EC 1.7.99.4) |
Gene: b1227: Respiratory nitrate reductase gamma chain (EC 1.7.99.4) |
Gene: KPN_02211: Respiratory nitrate reductase gamma chain (EC 1.7.99.4) |
|
Gene: PMI3574: Respiratory nitrate reductase gamma chain (EC 1.7.99.4) |
Gene: STM1761: Respiratory nitrate reductase gamma chain (EC 1.7.99.4) |
Gene: Spro_2880: Respiratory nitrate reductase gamma chain (EC 1.7.99.4) |
|
Respiratory nitrate reductase gamma chain (EC 1.7.99.4) |
| CRON 16. | |||||||||||||
| malP |
*
Citrobacter koseri ATCC BAA-895 Site: position = -73 score = 3.7 sequence = ATGAGGAAGGTCAA Gene: CKO_04838: Maltodextrin phosphorylase (EC 2.4.1.1) |
Gene: ETAE_3304: Maltodextrin phosphorylase (EC 2.4.1.1) |
*
Enterobacter sp. 638 Site: position = -340 score = 3.66 sequence = CTGATACGCGTCAA Gene: Ent638_3830: Maltodextrin phosphorylase (EC 2.4.1.1) |
Gene: EAM_3261: Maltodextrin phosphorylase (EC 2.4.1.1) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -251 score = 4.01 sequence = TTGATTACCATGAA Gene: ECA4136: Maltodextrin phosphorylase (EC 2.4.1.1) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -75 score = 3.7 sequence = ATGAGGAAGGTCAA Site: position = -340 score = 4.04 sequence = ATGATCTTAATAAA Gene: b3417: Maltodextrin phosphorylase (EC 2.4.1.1) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -370 score = 3.57 sequence = TTGTTTTTATTAAA Gene: KPN_03787: Maltodextrin phosphorylase (EC 2.4.1.1) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -359 score = 3.85 sequence = ATGATTTATTTCAT Gene: plu0470: Maltodextrin phosphorylase (EC 2.4.1.1) |
|
*
Salmonella typhimurium LT2 Site: position = 16 score = 3.71 sequence = TCAATAAAGATCAA Gene: STM3514: Maltodextrin phosphorylase (EC 2.4.1.1) |
*
Serratia proteamaculans 568 Site: position = -359 score = 3.79 sequence = TTGCTATTGATCAC Gene: Spro_4636: Maltodextrin phosphorylase (EC 2.4.1.1) |
|
Maltodextrin phosphorylase (EC 2.4.1.1) |
| malQ |
Gene: CKO_04837: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) |
Gene: ETAE_3305: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) |
Gene: Ent638_3829: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) |
Gene: EAM_3260: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) |
Gene: ECA4135: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) |
Gene: b3416: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) |
Gene: KPN_03786: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) |
Gene: plu0469: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) |
|
Gene: STM3513: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) |
Gene: Spro_4635: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) |
Gene: y3902: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) |
4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) |
| CRON 17. | |||||||||||||
| dcuS |
*
Citrobacter koseri ATCC BAA-895 Site: position = -199 score = 3.35 sequence = GTGATCCCCATCAG Gene: CKO_03745: Fumarate respiration sensor kinase protein DcuS |
|
*
Enterobacter sp. 638 Site: position = -122 score = 3.66 sequence = TTTATATAGGTCAC Gene: Ent638_2555: Fumarate respiration sensor kinase protein DcuS |
*
Erwinia amylovora ATCC 49946 Site: position = -115 score = 3.42 sequence = TTGCTTAAGATCGT Gene: EAM_1542: Fumarate respiration sensor kinase protein DcuS |
Gene: ECA4399: Fumarate respiration sensor kinase protein DcuS |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -311 score = 3.58 sequence = TTGAGATTAAATAA Gene: b4125: Fumarate respiration sensor kinase protein DcuS |
Gene: KPN_01551: Fumarate respiration sensor kinase protein DcuS |
|
|
*
Salmonella typhimurium LT2 Site: position = -177 score = 3.87 sequence = CTGATGAAAATAAA Site: position = -274 score = 4.77 sequence = TTGATTGTGATCAA Gene: STM4304: Fumarate respiration sensor kinase protein DcuS |
*
Serratia proteamaculans 568 Site: position = -188 score = 3.33 sequence = TTAATGGCTATCAT Gene: Spro_1959: Fumarate respiration sensor kinase protein DcuS |
|
Fumarate respiration sensor kinase protein DcuS |
| dcuR |
Gene: CKO_03746: Fumarate respiration transcriptional regulator DcuR |
|
Gene: Ent638_2556: Fumarate respiration transcriptional regulator DcuR |
Gene: EAM_1541: Fumarate respiration transcriptional regulator DcuR |
Gene: ECA4398: Fumarate respiration transcriptional regulator DcuR |
Gene: b4124: Fumarate respiration transcriptional regulator DcuR |
Gene: KPN_01550: Fumarate respiration transcriptional regulator DcuR |
|
|
Gene: STM4303: Fumarate respiration transcriptional regulator DcuR |
Gene: Spro_1958: Fumarate respiration transcriptional regulator DcuR |
|
Fumarate respiration transcriptional regulator DcuR |
| CRON 18. | |||||||||||||
| upp |
*
Citrobacter koseri ATCC BAA-895 Site: position = -103 score = 4.61 sequence = TTGATCCATGTCAA Gene: CKO_00293: Uracil phosphoribosyltransferase (EC 2.4.2.9) |
*
Edwardsiella tarda EIB202 Site: position = -97 score = 4.52 sequence = TTGATTGAGATCAT Gene: ETAE_1087: Uracil phosphoribosyltransferase (EC 2.4.2.9) |
*
Enterobacter sp. 638 Site: position = -97 score = 4.39 sequence = TTGATCACCGTCAA Gene: Ent638_2986: Uracil phosphoribosyltransferase (EC 2.4.2.9) |
Gene: EAM_2440: Uracil phosphoribosyltransferase (EC 2.4.2.9) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -169 score = 4.29 sequence = TTGATCTGGATCAG Gene: ECA1255: Uracil phosphoribosyltransferase (EC 2.4.2.9) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -95 score = 4.56 sequence = TTGACTAAAGTCAA Gene: b2498: Uracil phosphoribosyltransferase (EC 2.4.2.9) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -96 score = 5.03 sequence = TTGATATACGTCAA Gene: KPN_02821: Uracil phosphoribosyltransferase (EC 2.4.2.9) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -103 score = 5.09 sequence = TTGATGAAAATCAA Gene: plu2759: Uracil phosphoribosyltransferase (EC 2.4.2.9) |
*
Proteus mirabilis HI4320 Site: position = -97 score = 5.06 sequence = TTGATCAATATCAA Gene: PMI1574: Uracil phosphoribosyltransferase (EC 2.4.2.9) |
*
Salmonella typhimurium LT2 Site: position = -103 score = 4.55 sequence = TTGATCCAGGTCAA Gene: STM2498: Uracil phosphoribosyltransferase (EC 2.4.2.9) |
Gene: Spro_3523: Uracil phosphoribosyltransferase (EC 2.4.2.9) |
*
Yersinia pestis KIM Site: position = -98 score = 4.44 sequence = TTGATCTGAATCAG Gene: y1408: Uracil phosphoribosyltransferase (EC 2.4.2.9) |
Uracil phosphoribosyltransferase (EC 2.4.2.9) |
| uraA2 |
Gene: CKO_00294: Uracil permease |
Gene: ETAE_1088: Uracil permease |
Gene: Ent638_2985: Uracil permease |
Gene: EAM_2439: Uracil permease |
Gene: ECA1256: Uracil permease |
Gene: b2497: Uracil permease |
Gene: KPN_02820: Uracil permease |
|
Gene: PMI1573: Uracil permease |
Gene: STM2497: Uracil permease |
Gene: Spro_3522: Uracil permease |
|
Uracil permease |
| CRON 19. | |||||||||||||
| yjiH |
|
|
|
|
|
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -5 score = 3.86 sequence = TTGTTATGACACAA Gene: b4330: putative inner membrane protein |
|
|
|
*
Salmonella typhimurium LT2 Site: position = -283 score = 4.44 sequence = TTGACTAACGTCAA Gene: STM4514.S: putative inner membrane protein |
|
|
putative inner membrane protein |
| yjiG |
|
|
|
|
|
Gene: b4329: Putative membrane protein |
|
|
|
Gene: STM4513: Putative membrane protein |
|
|
Putative membrane protein |
| iadA |
|
*
Edwardsiella tarda EIB202 Site: position = 22 score = 3.38 sequence = CCGACGTCTATCAA Gene: ETAE_1362: Isoaspartyl dipeptidase (EC 3.4.19.5) @ Asp-X dipeptidase |
|
|
|
Gene: b4328: Isoaspartyl dipeptidase (EC 3.4.19.5) @ Asp-X dipeptidase |
|
|
|
Gene: STM4512: Isoaspartyl dipeptidase (EC 3.4.19.5) @ Asp-X dipeptidase |
|
|
Isoaspartyl dipeptidase (EC 3.4.19.5) @ Asp-X dipeptidase |
| yjiE |
|
Gene: ETAE_0919: putative transcriptional regulator, LysR family |
|
|
|
Gene: b4327: putative transcriptional regulator, LysR family |
|
|
|
Gene: STM4511: putative transcriptional regulator, LysR family |
|
|
putative transcriptional regulator, LysR family |
| CRON 20. | |||||||||||||
| icdA |
Gene: CKO_01835: Isocitrate dehydrogenase (EC 1.1.1.42) |
*
Edwardsiella tarda EIB202 Site: position = -73 score = 3.93 sequence = TTTTATTAAATCAA Gene: ETAE_2050: Isocitrate dehydrogenase (EC 1.1.1.42) |
Gene: Ent638_1649: Isocitrate dehydrogenase (EC 1.1.1.42) |
Gene: EAM_1520: Isocitrate dehydrogenase (EC 1.1.1.42) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -158 score = 3.67 sequence = GTGATTTTTAACAG Gene: ECA2439: Isocitrate dehydrogenase (EC 1.1.1.42) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -89 score = 3.62 sequence = TTGCTCTAAAGCAT Gene: b1136: Isocitrate dehydrogenase (EC 1.1.1.42) |
Gene: KPN_01144: Isocitrate dehydrogenase (EC 1.1.1.42) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -249 score = 4.76 sequence = TTGTTAAATATCAA Gene: plu2801: Isocitrate dehydrogenase (EC 1.1.1.42) |
Gene: PMI0891: Isocitrate dehydrogenase (EC 1.1.1.42) |
Gene: STM1238: Isocitrate dehydrogenase (EC 1.1.1.42) |
*
Serratia proteamaculans 568 Site: position = -3 score = 4.26 sequence = TTGATGGAAAGCAA Gene: Spro_2025: Isocitrate dehydrogenase (EC 1.1.1.42) |
*
Yersinia pestis KIM Site: position = -106 score = 3.67 sequence = GTGATTTTTAACAG Gene: y1802: Isocitrate dehydrogenase (EC 1.1.1.42) |
Isocitrate dehydrogenase (EC 1.1.1.42) |
| CRON 21. | |||||||||||||
| pdhR |
*
Citrobacter koseri ATCC BAA-895 Site: position = -116 score = 4.7 sequence = CTGATTTCAATCAA Gene: CKO_03260: Pyruvate dehydrogenase complex transcriptional regulator PdhR, GntR family |
*
Edwardsiella tarda EIB202 Site: position = -165 score = 4.52 sequence = TTGATTGTTAACAA Site: position = -139 score = 5.03 sequence = ATGATTTACATCAA Gene: ETAE_0658: Pyruvate dehydrogenase complex transcriptional regulator PdhR, GntR family |
*
Enterobacter sp. 638 Site: position = -116 score = 4.7 sequence = CTGATTTCAATCAA Gene: Ent638_0659: Pyruvate dehydrogenase complex transcriptional regulator PdhR, GntR family |
Gene: EAM_0746: Pyruvate dehydrogenase complex transcriptional regulator PdhR, GntR family |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -116 score = 4.23 sequence = GTGATTTAGCTCAA Gene: ECA3790: Pyruvate dehydrogenase complex transcriptional regulator PdhR, GntR family |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -115 score = 4.82 sequence = ATGATTTCAATCAA Gene: b0113: Pyruvate dehydrogenase complex transcriptional regulator PdhR, GntR family |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -114 score = 4.7 sequence = CTGATTTCAATCAA Gene: KPN_00117: Pyruvate dehydrogenase complex transcriptional regulator PdhR, GntR family |
Gene: plu3624: Pyruvate dehydrogenase complex transcriptional regulator PdhR, GntR family |
*
Proteus mirabilis HI4320 Site: position = -134 score = 4.15 sequence = ATGATTTCGCTCAA Site: position = -245 score = 4.01 sequence = ATGTGTTTAATCAA Gene: PMI2047: Pyruvate dehydrogenase complex transcriptional regulator PdhR, GntR family |
*
Salmonella typhimurium LT2 Site: position = -116 score = 4.7 sequence = CTGATTTCAATCAA Gene: STM0151: Pyruvate dehydrogenase complex transcriptional regulator PdhR, GntR family |
*
Serratia proteamaculans 568 Site: position = -117 score = 4.55 sequence = CTGATTTCGATCAA Gene: Spro_4012: Pyruvate dehydrogenase complex transcriptional regulator PdhR, GntR family |
*
Yersinia pestis KIM Site: position = -135 score = 4.36 sequence = ATGATTTCGGTCAA Gene: y0766: Pyruvate dehydrogenase complex transcriptional regulator PdhR, GntR family |
Pyruvate dehydrogenase complex transcriptional regulator PdhR, GntR family |
| aceE |
*
Citrobacter koseri ATCC BAA-895 Site: position = -133 score = 4.61 sequence = ATGTTGTAAATCAA Gene: CKO_03259: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: ETAE_0659: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: Ent638_0660: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: EAM_0747: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: ECA3789: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -131 score = 4.61 sequence = ATGTTGTAAATCAA Gene: b0114: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: KPN_00118: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: plu3623: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: PMI2046: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: STM0152: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: Spro_4011: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: y0767: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
| aceF |
Gene: CKO_03258: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: ETAE_0660: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: Ent638_0661: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: EAM_0748: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: ECA3788: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: b0115: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: KPN_00119: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: plu3622: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: PMI2045: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: STM0153: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: Spro_4010: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: y0768: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
| lpdA |
Gene: CKO_03256: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Gene: ETAE_0662: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Gene: Ent638_0662: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Gene: EAM_0749: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Gene: ECA3787: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Gene: b0116: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Gene: KPN_00120: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Gene: plu3621: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Gene: PMI2044: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Gene: STM0154: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Gene: Spro_4009: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Gene: y0769: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
| CRON 22. | |||||||||||||
| gltA |
*
Citrobacter koseri ATCC BAA-895 Site: position = -67 score = 3.76 sequence = TTGATTTATGTAAC Gene: CKO_02439: Citrate synthase (EC 2.3.3.1) |
Gene: ETAE_2589: Citrate synthase (EC 2.3.3.1) |
*
Enterobacter sp. 638 Site: position = -147 score = 3.61 sequence = TCGCGCTAGATCAA Gene: Ent638_1221: Citrate synthase (EC 2.3.3.1) |
*
Erwinia amylovora ATCC 49946 Site: position = -171 score = 3.69 sequence = ATGATACTCATCAG Gene: EAM_1167: Citrate synthase (EC 2.3.3.1) |
*2
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -185 score = 4.79 sequence = TTTATCTAAATCAA Gene: ECA4121: Citrate synthase (EC 2.3.3.1) Gene: ECA1356: Citrate synthase (EC 2.3.3.1) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -173 score = 3.6 sequence = TTATTCGTCATCAA Gene: b0720: Citrate synthase (EC 2.3.3.1) |
*2
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = 28 score = 3.62 sequence = TTGCCGGACAACAA Gene: KPN_00489: Citrate synthase (EC 2.3.3.1) Gene: KPN_00727: Citrate synthase (EC 2.3.3.1) |
*2
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -56 score = 3.79 sequence = CCTATTTAAATCAA Gene: plu3138: Citrate synthase (EC 2.3.3.1) Site: position = -110 score = 3.62 sequence = TTGATGACAAAGAA Gene: plu1425: Citrate synthase (EC 2.3.3.1) |
Gene: PMI0564: Citrate synthase (EC 2.3.3.1) |
*
Salmonella typhimurium LT2 Site: position = -213 score = 3.91 sequence = TCGAAATTAATCAA Gene: STM0730: Citrate synthase (EC 2.3.3.1) |
Gene: Spro_1262: Citrate synthase (EC 2.3.3.1) |
Gene: y3072: Citrate synthase (EC 2.3.3.1) |
Citrate synthase (EC 2.3.3.1) |
| CRON 23. | |||||||||||||
| ssuE |
*
Citrobacter koseri ATCC BAA-895 Site: position = -43 score = 3.71 sequence = TTAATGAAAATCGA Gene: CKO_02124: FMN reductase (EC 1.5.1.29) |
|
*
Enterobacter sp. 638 Site: position = -181 score = 3.52 sequence = TTGACCTGAGGCAA Gene: Ent638_1456: FMN reductase (EC 1.5.1.29) |
Gene: EAM_1365: FMN reductase (EC 1.5.1.29) |
|
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -278 score = 3.6 sequence = GCCATTTAAATCAA Gene: b0937: FMN reductase (EC 1.5.1.29) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -182 score = 3.83 sequence = TTGACCTGCGACAA Gene: KPN_00973: FMN reductase (EC 1.5.1.29) |
|
|
|
*
Serratia proteamaculans 568 Site: position = -256 score = 4.55 sequence = TTGATTAAAAGCAA Gene: Spro_1739: FMN reductase (EC 1.5.1.29) |
*
Yersinia pestis KIM Site: position = -252 score = 3.66 sequence = GTGATCTGGCTCAA Gene: y0246: FMN reductase (EC 1.5.1.29) |
FMN reductase (EC 1.5.1.29) |
| ssuA |
Gene: CKO_02125: Sulfonate ABC transporter, periplasmic sulfonate-binding protein ssuA / Alkanesulfonates-binding protein |
|
Gene: Ent638_1455: Sulfonate ABC transporter, periplasmic sulfonate-binding protein ssuA / Alkanesulfonates-binding protein |
*
Erwinia amylovora ATCC 49946 Site: position = 9 score = 3.69 sequence = TTGTCTAAAGTCAT Gene: EAM_1364: Sulfonate ABC transporter, periplasmic sulfonate-binding protein ssuA / Alkanesulfonates-binding protein |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -102 score = 3.57 sequence = TTGAGATTTAAAAA Gene: ECA4410: Sulfonate ABC transporter, periplasmic sulfonate-binding protein ssuA / Alkanesulfonates-binding protein |
Gene: b0936: Sulfonate ABC transporter, periplasmic sulfonate-binding protein ssuA / Alkanesulfonates-binding protein |
Gene: KPN_00972: Sulfonate ABC transporter, periplasmic sulfonate-binding protein ssuA / Alkanesulfonates-binding protein |
|
|
|
Gene: Spro_1738: Sulfonate ABC transporter, periplasmic sulfonate-binding protein ssuA / Alkanesulfonates-binding protein |
Gene: y0245: Sulfonate ABC transporter, periplasmic sulfonate-binding protein ssuA / Alkanesulfonates-binding protein |
Sulfonate ABC transporter, periplasmic sulfonate-binding protein ssuA / Alkanesulfonates-binding protein |
| ssuD |
Gene: CKO_02126: Alkanesulfonate monooxygenase (EC 1.14.14.5) |
|
Gene: Ent638_1454: Alkanesulfonate monooxygenase (EC 1.14.14.5) |
Gene: EAM_1363: Alkanesulfonate monooxygenase (EC 1.14.14.5) |
Gene: ECA4411: Alkanesulfonate monooxygenase (EC 1.14.14.5) |
Gene: b0935: Alkanesulfonate monooxygenase (EC 1.14.14.5) |
Gene: KPN_00971: Alkanesulfonate monooxygenase (EC 1.14.14.5) |
|
|
|
Gene: Spro_1737: Alkanesulfonate monooxygenase (EC 1.14.14.5) |
Gene: y0244: Alkanesulfonate monooxygenase (EC 1.14.14.5) |
Alkanesulfonate monooxygenase (EC 1.14.14.5) |
| ssuC |
Gene: CKO_02127: Alkanesulfonates transport system permease protein |
|
Gene: Ent638_1453: Alkanesulfonates transport system permease protein |
Gene: EAM_1362: Alkanesulfonates transport system permease protein |
Gene: ECA4412: Alkanesulfonates transport system permease protein |
Gene: b0934: Alkanesulfonates transport system permease protein |
Gene: KPN_00970: Alkanesulfonates transport system permease protein |
|
|
|
Gene: Spro_1736: Alkanesulfonates transport system permease protein |
*
Yersinia pestis KIM Site: position = 0 score = 3.8 sequence = ATGATGACAATCAG Gene: y0243: Alkanesulfonates transport system permease protein |
Alkanesulfonates transport system permease protein |
| ssuB |
Gene: CKO_02128: Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB |
|
Gene: Ent638_1452: Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB |
Gene: EAM_1361: Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB |
Gene: ECA4413: Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB |
Gene: b0933: Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB |
Gene: KPN_00969: Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB |
|
|
|
Gene: Spro_1735: Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB |
Gene: y0242: Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB |
Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB |
| CRON 24. | |||||||||||||
| moeA |
Gene: CKO_02282: Molybdopterin biosynthesis protein MoeA |
*
Edwardsiella tarda EIB202 Site: position = -335 score = 3.78 sequence = ATGATACAGATCAC Gene: ETAE_1153: Molybdopterin biosynthesis protein MoeA |
*
Enterobacter sp. 638 Site: position = -155 score = 3.33 sequence = TCTATAAATATCAT Gene: Ent638_1321: Molybdopterin biosynthesis protein MoeA |
*
Erwinia amylovora ATCC 49946 Site: position = -244 score = 3.52 sequence = CTGTGATAAATCAG Gene: EAM_1284: Molybdopterin biosynthesis protein MoeA |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -383 score = 3.66 sequence = ATGATGTAAAGCAG Gene: ECA2836: Molybdopterin biosynthesis protein MoeA |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = 18 score = 3.7 sequence = TTGATGTCGCTCGA Gene: b0827: Molybdopterin biosynthesis protein MoeA |
Gene: KPN_00860: Molybdopterin biosynthesis protein MoeA |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -244 score = 3.94 sequence = TTGACAGTGGTCAA Gene: plu1540: Molybdopterin biosynthesis protein MoeA |
*
Proteus mirabilis HI4320 Site: position = -182 score = 3.65 sequence = TTAAAATACAACAA Gene: PMI0637: Molybdopterin biosynthesis protein MoeA |
Gene: STM0846: Molybdopterin biosynthesis protein MoeA |
Gene: Spro_1547: Molybdopterin biosynthesis protein MoeA |
*
Yersinia pestis KIM Site: position = -202 score = 3.85 sequence = TTGATATATATATA Gene: y2673: Molybdopterin biosynthesis protein MoeA |
Molybdopterin biosynthesis protein MoeA |
| moeB |
Gene: CKO_02283: Molybdopterin biosynthesis protein MoeB |
Gene: ETAE_1152: Molybdopterin biosynthesis protein MoeB |
Gene: Ent638_1320: Molybdopterin biosynthesis protein MoeB |
Gene: EAM_1283: Molybdopterin biosynthesis protein MoeB |
Gene: ECA2837: Molybdopterin biosynthesis protein MoeB |
Gene: b0826: Molybdopterin biosynthesis protein MoeB |
Gene: KPN_00859: Molybdopterin biosynthesis protein MoeB |
Gene: plu1539: Molybdopterin biosynthesis protein MoeB |
Gene: PMI0636: Molybdopterin biosynthesis protein MoeB |
Gene: STM0845: Molybdopterin biosynthesis protein MoeB |
Gene: Spro_1546: Molybdopterin biosynthesis protein MoeB |
Gene: y2674: Molybdopterin biosynthesis protein MoeB |
Molybdopterin biosynthesis protein MoeB |
| CRON 25. | |||||||||||||
| caiF |
Gene: CKO_03349: Transcriptional activatory protein CaiF |
*
Edwardsiella tarda EIB202 Site: position = -358 score = 3.58 sequence = ATGATCACCATCAC Gene: ETAE_2672: Transcriptional activatory protein CaiF |
|
|
|
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -53 score = 3.65 sequence = TTGCTTCAAAACGA Gene: b0034: Transcriptional activatory protein CaiF |
|
|
*
Proteus mirabilis HI4320 Site: position = -313 score = 3.96 sequence = TTGTTGTTTATAAA Gene: PMI2660: Transcriptional activatory protein CaiF |
Gene: STM0068: Transcriptional activatory protein CaiF |
|
|
Transcriptional activatory protein CaiF |
| CRON 26. | |||||||||||||
| fdnG |
|
2
Edwardsiella tarda EIB202 Gene: ETAE_3337: Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Gene: ETAE_3338: Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing |
*3
Enterobacter sp. 638 Site: position = -77 score = 3.87 sequence = TTGATTTGACGCAA Gene: Ent638_2055: Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Gene: Ent638_2054: Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Gene: Ent638_1750: Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing |
|
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -81 score = 3.87 sequence = TTGATTTTGCGCAA Gene: ECA1408: Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -133 score = 4.38 sequence = TTGAGGTAGGTCAA Gene: b1474: Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing |
Gene: KPN_01867: Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing |
|
|
*
Salmonella typhimurium LT2 Site: position = -126 score = 3.87 sequence = TTGATTTGACGCAA Gene: STM1570: Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing |
|
|
Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing |
| fdnH |
Gene: CKO_01514: Formate dehydrogenase O beta subunit (EC 1.2.1.2) |
Gene: ETAE_3339: Formate dehydrogenase O beta subunit (EC 1.2.1.2) |
2
Enterobacter sp. 638 Gene: Ent638_2053: Formate dehydrogenase O beta subunit (EC 1.2.1.2) Gene: Ent638_1751: Formate dehydrogenase O beta subunit (EC 1.2.1.2) |
|
Gene: ECA1407: Formate dehydrogenase O beta subunit (EC 1.2.1.2) |
Gene: b1475: Formate dehydrogenase O beta subunit (EC 1.2.1.2) |
Gene: KPN_01866: Formate dehydrogenase O beta subunit (EC 1.2.1.2) |
|
|
Gene: STM1569: Formate dehydrogenase O beta subunit (EC 1.2.1.2) |
|
|
Formate dehydrogenase O beta subunit (EC 1.2.1.2) |
| fdnI |
Gene: CKO_01515: Formate dehydrogenase N gamma subunit (EC 1.2.1.2) |
Gene: ETAE_3340: Formate dehydrogenase N gamma subunit (EC 1.2.1.2) |
2
Enterobacter sp. 638 Gene: Ent638_2052: Formate dehydrogenase N gamma subunit (EC 1.2.1.2) Gene: Ent638_1752: Formate dehydrogenase N gamma subunit (EC 1.2.1.2) |
|
Gene: ECA1406: Formate dehydrogenase N gamma subunit (EC 1.2.1.2) |
Gene: b1476: Formate dehydrogenase N gamma subunit (EC 1.2.1.2) |
Gene: KPN_01865: Formate dehydrogenase N gamma subunit (EC 1.2.1.2) |
|
|
Gene: STM1568: Formate dehydrogenase N gamma subunit (EC 1.2.1.2) |
|
|
Formate dehydrogenase N gamma subunit (EC 1.2.1.2) |
| CRON 27. | |||||||||||||
| cydA |
*
Citrobacter koseri ATCC BAA-895 Site: position = -347 score = 5.56 sequence = TTGATTTAAATCAA Site: position = -250 score = 4.09 sequence = TTGATCAATGTCGA Gene: CKO_02410: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) |
*
Edwardsiella tarda EIB202 Site: position = -368 score = 3.95 sequence = TTGCGTCAGATCAA Gene: ETAE_2580: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) |
*
Enterobacter sp. 638 Site: position = -352 score = 5.56 sequence = TTGATTTAAATCAA Site: position = -300 score = 3.77 sequence = TTGTCCCCGATCAA Gene: Ent638_1230: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) |
|
*2
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -398 score = 5.07 sequence = TTGTTTTAGATCAA Gene: ECA1365: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Site: position = -387 score = 3.8 sequence = GTTATATTTATCAA Gene: ECA2998: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -296 score = 4.6 sequence = TTGTTCTCGATCAA Site: position = -348 score = 5.09 sequence = TTGATATTTATCAA Gene: b0733: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -345 score = 5.47 sequence = TTGATTTATATCAA Site: position = -293 score = 4.08 sequence = TTGTCTCAAGTCAA Gene: KPN_00736: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) |
Gene: plu1449: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) |
*
Proteus mirabilis HI4320 Site: position = -312 score = 4.47 sequence = TTGATGTGGGTCAA Gene: PMI0573: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) |
*
Salmonella typhimurium LT2 Site: position = -349 score = 5.28 sequence = TTGATTTTAATCAA Site: position = -297 score = 3.87 sequence = TTGTCCGTGATCAA Gene: STM0740: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) |
*
Serratia proteamaculans 568 Site: position = -360 score = 4.66 sequence = TTGTTTCAGATCAA Gene: Spro_1271: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) |
*
Yersinia pestis KIM Site: position = -314 score = 5.08 sequence = TTGTTCTAAATCAA Site: position = -263 score = 4.45 sequence = TTGTCGTAGATCAA Gene: y3063: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) |
Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) |
| cydB |
Gene: CKO_02409: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) |
Gene: ETAE_2579: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) |
Gene: Ent638_1231: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) |
|
2
Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA1366: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Gene: ECA2999: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) |
Gene: b0734: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) |
Gene: KPN_00737: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) |
Gene: plu1450: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) |
Gene: PMI0574: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) |
Gene: STM0741: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) |
Gene: Spro_1272: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) |
Gene: y3062: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) |
Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) |
| CRON 28. | |||||||||||||
| ubiC |
Gene: CKO_03876: Chorismate--pyruvate lyase (EC 4.1.3.40) |
Gene: ETAE_0216: Chorismate--pyruvate lyase (EC 4.1.3.40) |
Gene: Ent638_0243: Chorismate--pyruvate lyase (EC 4.1.3.40) |
*
Erwinia amylovora ATCC 49946 Site: position = -194 score = 3.81 sequence = CTGATATTAGTCAT Gene: EAM_0260: Chorismate--pyruvate lyase (EC 4.1.3.40) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -230 score = 3.32 sequence = GTGACTAGGGTCAA Gene: ECA0626: Chorismate--pyruvate lyase (EC 4.1.3.40) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -70 score = 3.37 sequence = TTGCTTTACATCTC Gene: b4039: Chorismate--pyruvate lyase (EC 4.1.3.40) |
Gene: KPN_04427: Chorismate--pyruvate lyase (EC 4.1.3.40) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -253 score = 3.76 sequence = TTATTTTTGGTCAA Gene: plu4378: Chorismate--pyruvate lyase (EC 4.1.3.40) |
*
Proteus mirabilis HI4320 Site: position = -163 score = 4.33 sequence = TTGTTTTTTCTCAA Gene: PMI2753: Chorismate--pyruvate lyase (EC 4.1.3.40) |
Gene: STM4233: Chorismate--pyruvate lyase (EC 4.1.3.40) |
*
Serratia proteamaculans 568 Site: position = -223 score = 3.61 sequence = TTGCTGGAGATCAC Gene: Spro_4464: Chorismate--pyruvate lyase (EC 4.1.3.40) |
*
Yersinia pestis KIM Site: position = -253 score = 3.34 sequence = CTGATATTTATAAT Gene: y0568: Chorismate--pyruvate lyase (EC 4.1.3.40) |
Chorismate--pyruvate lyase (EC 4.1.3.40) |
| ubiA |
Gene: CKO_03875: 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-) |
Gene: ETAE_0217: 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-) |
Gene: Ent638_0244: 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-) |
Gene: EAM_0261: 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-) |
Gene: ECA0627: 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-) |
Gene: b4040: 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-) |
Gene: KPN_04428: 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-) |
Gene: plu4377: 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-) |
Gene: PMI2752: 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-) |
Gene: STM4234: 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-) |
Gene: Spro_4463: 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-) |
Gene: y0569: 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-) |
4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-) |
| CRON 29. | |||||||||||||
| yjiD |
|
|
|
|
|
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -216 score = 4.78 sequence = ATGATTTTTATCAA Site: position = -25 score = 3.68 sequence = TTGCTAAACGTCAG Gene: b4326: YjiD protein |
|
|
|
|
|
|
YjiD protein |
| CRON 30. | |||||||||||||
| arcA |
*
Citrobacter koseri ATCC BAA-895 Site: position = -291 score = 5.06 sequence = TTGATATATGTCAA Gene: CKO_03387: Aerobic respiration control protein arcA |
*
Edwardsiella tarda EIB202 Site: position = -300 score = 5.06 sequence = TTGATATATGTCAA Gene: ETAE_0561: Aerobic respiration control protein arcA |
*
Enterobacter sp. 638 Site: position = -291 score = 5.06 sequence = TTGATATATGTCAA Gene: Ent638_0562: Aerobic respiration control protein arcA |
*
Erwinia amylovora ATCC 49946 Site: position = -399 score = 4.49 sequence = TTGATGCAGGTCAA Gene: EAM_0640: Aerobic respiration control protein arcA |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -339 score = 5.06 sequence = TTGATATATGTCAA Gene: ECA3893: Aerobic respiration control protein arcA |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -291 score = 5.06 sequence = TTGATATATGTCAA Gene: b4401: Aerobic respiration control protein arcA |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -291 score = 5.06 sequence = TTGATATATGTCAA Gene: KPN_04856: Aerobic respiration control protein arcA |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -282 score = 4.93 sequence = TTGATGTACGTCAA Gene: plu0562: Aerobic respiration control protein arcA |
*
Proteus mirabilis HI4320 Site: position = -282 score = 4.63 sequence = TTGATATGTGTCAA Site: position = -343 score = 4.0 sequence = ATTACATAAATCAA Gene: PMI3719: Aerobic respiration control protein arcA |
*
Salmonella typhimurium LT2 Site: position = -291 score = 5.06 sequence = TTGATATATGTCAA Gene: STM4598: Aerobic respiration control protein arcA |
*
Serratia proteamaculans 568 Site: position = -299 score = 5.06 sequence = TTGATATATGTCAA Gene: Spro_0681: Aerobic respiration control protein arcA |
*
Yersinia pestis KIM Site: position = -298 score = 5.06 sequence = TTGATATATGTCAA Gene: y3721: Aerobic respiration control protein arcA |
Aerobic respiration control protein arcA |
| CRON 31. | |||||||||||||
| pfkA |
*
Citrobacter koseri ATCC BAA-895 Site: position = -132 score = 4.04 sequence = CTGACCTGAATCAA Gene: CKO_03085: 6-phosphofructokinase (EC 2.7.1.11) |
*
Edwardsiella tarda EIB202 Site: position = -223 score = 4.04 sequence = CTGACCTGAATCAA Gene: ETAE_3450: 6-phosphofructokinase (EC 2.7.1.11) |
*
Enterobacter sp. 638 Site: position = -174 score = 4.04 sequence = CTGACCTGAATCAA Gene: Ent638_4056: 6-phosphofructokinase (EC 2.7.1.11) |
*
Erwinia amylovora ATCC 49946 Site: position = -31 score = 3.97 sequence = ATTATTTGCATCAA Gene: EAM_0103: 6-phosphofructokinase (EC 2.7.1.11) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -140 score = 4.04 sequence = CTGACCTGAATCAA Gene: ECA4307: 6-phosphofructokinase (EC 2.7.1.11) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -125 score = 4.04 sequence = CTGACCTGAATCAA Gene: b3916: 6-phosphofructokinase (EC 2.7.1.11) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -123 score = 4.04 sequence = CTGACCTGAATCAA Gene: KPN_04223: 6-phosphofructokinase (EC 2.7.1.11) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -203 score = 4.09 sequence = TTGATCTCAAAAAA Gene: plu4774: 6-phosphofructokinase (EC 2.7.1.11) |
*
Proteus mirabilis HI4320 Site: position = -194 score = 3.68 sequence = TTAATGCGCATCAA Gene: PMI3203: 6-phosphofructokinase (EC 2.7.1.11) |
*
Salmonella typhimurium LT2 Site: position = -126 score = 4.04 sequence = CTGACCTGAATCAA Gene: STM4062: 6-phosphofructokinase (EC 2.7.1.11) |
*
Serratia proteamaculans 568 Site: position = -145 score = 4.05 sequence = GTGACTTGAATCAA Gene: Spro_4807: 6-phosphofructokinase (EC 2.7.1.11) |
*
Yersinia pestis KIM Site: position = -148 score = 4.18 sequence = CTGACTTGAATCAA Gene: y0059: 6-phosphofructokinase (EC 2.7.1.11) |
6-phosphofructokinase (EC 2.7.1.11) |
| CRON 32. | |||||||||||||
| acnA |
Gene: CKO_01358: Aconitate hydratase (EC 4.2.1.3); 2-methylisocitrate dehydratase (EC 4.2.1.99) |
|
*
Enterobacter sp. 638 Site: position = -135 score = 4.61 sequence = TTGTTTTATCTCAA Gene: Ent638_2192: Aconitate hydratase (EC 4.2.1.3); 2-methylisocitrate dehydratase (EC 4.2.1.99) |
*
Erwinia amylovora ATCC 49946 Site: position = 37 score = 4.45 sequence = TGGATGTAAATCAA Gene: EAM_1866: Aconitate hydratase (EC 4.2.1.3); 2-methylisocitrate dehydratase (EC 4.2.1.99) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -98 score = 3.69 sequence = ATGAGCTTACTCAA Gene: ECA1941: Aconitate hydratase (EC 4.2.1.3); 2-methylisocitrate dehydratase (EC 4.2.1.99) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -133 score = 3.65 sequence = TTGCTTTGCCACAA Gene: b1276: Aconitate hydratase (EC 4.2.1.3); 2-methylisocitrate dehydratase (EC 4.2.1.99) |
Gene: KPN_01272: Aconitate hydratase (EC 4.2.1.3); 2-methylisocitrate dehydratase (EC 4.2.1.99) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = 7 score = 4.56 sequence = TTGATTTAAAAAAA Gene: plu2432: Aconitate hydratase (EC 4.2.1.3); 2-methylisocitrate dehydratase (EC 4.2.1.99) |
Gene: PMI1320: Aconitate hydratase (EC 4.2.1.3); 2-methylisocitrate dehydratase (EC 4.2.1.99) |
*
Salmonella typhimurium LT2 Site: position = -301 score = 3.91 sequence = TTGATTAAACACAG Gene: STM1712: Aconitate hydratase (EC 4.2.1.3); 2-methylisocitrate dehydratase (EC 4.2.1.99) |
Gene: Spro_2654: Aconitate hydratase (EC 4.2.1.3); 2-methylisocitrate dehydratase (EC 4.2.1.99) |
*
Yersinia pestis KIM Site: position = -37 score = 3.88 sequence = TTGAATTAAAACAC Gene: y2063: Aconitate hydratase (EC 4.2.1.3); 2-methylisocitrate dehydratase (EC 4.2.1.99) |
Aconitate hydratase (EC 4.2.1.3); 2-methylisocitrate dehydratase (EC 4.2.1.99) |
| CRON 33. | |||||||||||||
| aldA |
*
Citrobacter koseri ATCC BAA-895 Site: position = -3 score = 4.13 sequence = CCGATGTATATCAA Gene: CKO_01448: Aldehyde dehydrogenase A (EC 1.2.1.22) / Glycolaldehyde dehydrogenase (EC 1.2.1.21) |
|
Gene: Ent638_1953: Aldehyde dehydrogenase A (EC 1.2.1.22) / Glycolaldehyde dehydrogenase (EC 1.2.1.21) |
|
Gene: ECA0118: Aldehyde dehydrogenase A (EC 1.2.1.22) / Glycolaldehyde dehydrogenase (EC 1.2.1.21) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -59 score = 4.31 sequence = TTGATGTTAATTAA Gene: b1415: Aldehyde dehydrogenase A (EC 1.2.1.22) / Glycolaldehyde dehydrogenase (EC 1.2.1.21) |
Gene: KPN_01501: Aldehyde dehydrogenase A (EC 1.2.1.22) / Glycolaldehyde dehydrogenase (EC 1.2.1.21) |
|
|
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|
|
Aldehyde dehydrogenase A (EC 1.2.1.22) / Glycolaldehyde dehydrogenase (EC 1.2.1.21) |
| CRON 34. | |||||||||||||
| ndh |
*
Citrobacter koseri ATCC BAA-895 Site: position = -163 score = 5.24 sequence = TTGATGTACATCAA Gene: CKO_01946: NADH dehydrogenase (EC 1.6.99.3) |
*
Edwardsiella tarda EIB202 Site: position = -162 score = 5.13 sequence = TTGATTTGAATCAA Gene: ETAE_2070: NADH dehydrogenase (EC 1.6.99.3) |
*
Enterobacter sp. 638 Site: position = -149 score = 5.06 sequence = TTGATTCATATCAA Gene: Ent638_1624: NADH dehydrogenase (EC 1.6.99.3) |
*
Erwinia amylovora ATCC 49946 Site: position = -146 score = 4.18 sequence = TTGACCAGCATCAA Gene: EAM_1473: NADH dehydrogenase (EC 1.6.99.3) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -149 score = 5.37 sequence = TTGATATATATCAA Gene: ECA1815: NADH dehydrogenase (EC 1.6.99.3) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -150 score = 5.17 sequence = TTGATTAACATCAA Gene: b1109: NADH dehydrogenase (EC 1.6.99.3) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -148 score = 4.83 sequence = TTGATGCACATCAA Gene: KPN_01106: NADH dehydrogenase (EC 1.6.99.3) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -150 score = 4.25 sequence = TTGATGTTGTTCAA Gene: plu2821: NADH dehydrogenase (EC 1.6.99.3) |
*
Proteus mirabilis HI4320 Site: position = -153 score = 5.46 sequence = TTGATATAAATCAA Gene: PMI0875: NADH dehydrogenase (EC 1.6.99.3) |
*
Salmonella typhimurium LT2 Site: position = -150 score = 4.83 sequence = TTGATGCACATCAA Gene: STM1211: NADH dehydrogenase (EC 1.6.99.3) |
*
Serratia proteamaculans 568 Site: position = -149 score = 5.24 sequence = TTGATGTACATCAA Gene: Spro_1926: NADH dehydrogenase (EC 1.6.99.3) |
*
Yersinia pestis KIM Site: position = -148 score = 5.37 sequence = TTGATATATATCAA Gene: y1777: NADH dehydrogenase (EC 1.6.99.3) |
NADH dehydrogenase (EC 1.6.99.3) |
| CRON 35. | |||||||||||||
| elbA |
|
|
|
|
|
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -164 score = 3.92 sequence = TTGTTTAACATCCA Gene: b1160: Enhancing lycopene biosynthesis protein 1 |
|
|
|
|
|
|
Enhancing lycopene biosynthesis protein 1 |
| CRON 36. | |||||||||||||
| puuA |
|
|
|
|
|
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -101 score = 3.33 sequence = TTAACATTTGACAA Gene: b1297: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -103 score = 3.33 sequence = TTAACATTTGACAA Gene: KPN_01021: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) |
|
|
|
*2
Serratia proteamaculans 568 Site: position = 31 score = 3.73 sequence = TTGTTCAGCATCAT Gene: Spro_2068: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) Gene: Spro_3216: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) |
|
Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) |
| CRON 37. | |||||||||||||
| yeiL |
|
|
|
|
|
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -100 score = 3.81 sequence = TTGAATCTTAACAA Gene: b2163: Predicted N-ribosylNicotinamide CRP-like regulator |
|
|
|
|
|
|
Predicted N-ribosylNicotinamide CRP-like regulator |
| CRON 38. | |||||||||||||
| soxS |
*
Citrobacter koseri ATCC BAA-895 Site: position = -83 score = 3.78 sequence = TCGCTTTACCTCAA Gene: CKO_03828: AraC-family transcriptional regulator |
|
*
Enterobacter sp. 638 Site: position = -217 score = 3.79 sequence = ATGCTTTTAATCAG Gene: Ent638_0266: AraC-family transcriptional regulator |
Gene: EAM_0316: AraC-family transcriptional regulator |
|
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -82 score = 3.78 sequence = TCGCTTTACCTCAA Gene: b4062: AraC-family transcriptional regulator |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -95 score = 3.39 sequence = TTCTTTTCCATAAA Gene: KPN_04462: AraC-family transcriptional regulator |
|
|
*
Salmonella typhimurium LT2 Site: position = -83 score = 3.78 sequence = TCGCTTTACCTCAA Gene: STM4265: AraC-family transcriptional regulator |
Gene: Spro_1523: AraC-family transcriptional regulator |
|
AraC-family transcriptional regulator |
| CRON 39. | |||||||||||||
| soxR |
*
Citrobacter koseri ATCC BAA-895 Site: position = -17 score = 3.44 sequence = TTGAGGTAAAGCGA Gene: CKO_03827: redox-sensitive transcriptional activator (MerR-family transcriptional regulator) |
|
Gene: Ent638_0267: redox-sensitive transcriptional activator (MerR-family transcriptional regulator) |
Gene: EAM_0317: redox-sensitive transcriptional activator (MerR-family transcriptional regulator) |
|
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -17 score = 3.44 sequence = TTGAGGTAAAGCGA Gene: b4063: redox-sensitive transcriptional activator (MerR-family transcriptional regulator) |
Gene: KPN_04463: redox-sensitive transcriptional activator (MerR-family transcriptional regulator) |
|
*
Proteus mirabilis HI4320 Site: position = -69 score = 3.36 sequence = TTGTATTGGGACAA Site: position = 16 score = 3.71 sequence = TAGATTTTAATCGA Gene: PMI2705: redox-sensitive transcriptional activator (MerR-family transcriptional regulator) |
*
Salmonella typhimurium LT2 Site: position = -17 score = 3.44 sequence = TTGAGGTAAAGCGA Gene: STM4266: redox-sensitive transcriptional activator (MerR-family transcriptional regulator) |
|
|
redox-sensitive transcriptional activator (MerR-family transcriptional regulator) |
| CRON 40. | |||||||||||||
| tdcA |
*
Citrobacter koseri ATCC BAA-895 Site: position = -183 score = 4.24 sequence = TTGACAAAAATCAT Gene: CKO_04518: Threonine catabolism transcriptional regulator TdcA, LysR family |
*
Edwardsiella tarda EIB202 Site: position = -131 score = 3.83 sequence = TTGCTCTTTATAAA Gene: ETAE_0893: Threonine catabolism transcriptional regulator TdcA, LysR family |
*
Enterobacter sp. 638 Site: position = -184 score = 4.51 sequence = TTGATCAATATCAG Gene: Ent638_3565: Threonine catabolism transcriptional regulator TdcA, LysR family |
|
|
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -183 score = 4.22 sequence = TTGACAAAAATCAG Gene: b3118: Threonine catabolism transcriptional regulator TdcA, LysR family |
Gene: KPN_02296: Threonine catabolism transcriptional regulator TdcA, LysR family |
|
|
*
Salmonella typhimurium LT2 Site: position = -184 score = 4.65 sequence = TTGATTGAAATCAG Gene: STM3245: Threonine catabolism transcriptional regulator TdcA, LysR family |
|
|
Threonine catabolism transcriptional regulator TdcA, LysR family |
| tdcB |
Gene: CKO_04517: Threonine dehydratase, catabolic (EC 4.3.1.19) |
Gene: ETAE_0894: Threonine dehydratase, catabolic (EC 4.3.1.19) |
Gene: Ent638_3564: Threonine dehydratase, catabolic (EC 4.3.1.19) |
|
|
Gene: b3117: Threonine dehydratase, catabolic (EC 4.3.1.19) |
Gene: KPN_02295: Threonine dehydratase, catabolic (EC 4.3.1.19) |
|
|
Gene: STM3244: Threonine dehydratase, catabolic (EC 4.3.1.19) |
|
|
Threonine dehydratase, catabolic (EC 4.3.1.19) |
| tdcC |
Gene: CKO_04516: L-threonine transporter, anaerobically inducible |
Gene: ETAE_0895: L-threonine transporter, anaerobically inducible |
Gene: Ent638_3563: L-threonine transporter, anaerobically inducible |
|
|
Gene: b3116: L-threonine transporter, anaerobically inducible |
Gene: KPN_02294: L-threonine transporter, anaerobically inducible |
|
|
Gene: STM3243: L-threonine transporter, anaerobically inducible |
|
|
L-threonine transporter, anaerobically inducible |
| tdcD |
Gene: CKO_04515: Propionate kinase (EC 2.7.2.15) / Acetate kinase (EC 2.7.2.1) |
Gene: ETAE_0896: Propionate kinase (EC 2.7.2.15) / Acetate kinase (EC 2.7.2.1) |
Gene: Ent638_3562: Propionate kinase (EC 2.7.2.15) / Acetate kinase (EC 2.7.2.1) |
|
|
Gene: b3115: Propionate kinase (EC 2.7.2.15) / Acetate kinase (EC 2.7.2.1) |
Gene: KPN_02293: Propionate kinase (EC 2.7.2.15) / Acetate kinase (EC 2.7.2.1) |
|
|
Gene: STM3242: Propionate kinase (EC 2.7.2.15) / Acetate kinase (EC 2.7.2.1) |
|
|
Propionate kinase (EC 2.7.2.15) / Acetate kinase (EC 2.7.2.1) |
| tdcE |
Gene: CKO_04514: 2-ketobutyrate formate-lyase (EC 2.3.1.-) / Pyruvate formate-lyase (EC 2.3.1.54) |
Gene: ETAE_0897: 2-ketobutyrate formate-lyase (EC 2.3.1.-) / Pyruvate formate-lyase (EC 2.3.1.54) |
Gene: Ent638_3561: 2-ketobutyrate formate-lyase (EC 2.3.1.-) / Pyruvate formate-lyase (EC 2.3.1.54) |
|
|
Gene: b3114: 2-ketobutyrate formate-lyase (EC 2.3.1.-) / Pyruvate formate-lyase (EC 2.3.1.54) |
Gene: KPN_02292: 2-ketobutyrate formate-lyase (EC 2.3.1.-) / Pyruvate formate-lyase (EC 2.3.1.54) |
|
|
Gene: STM3241: 2-ketobutyrate formate-lyase (EC 2.3.1.-) / Pyruvate formate-lyase (EC 2.3.1.54) |
|
|
2-ketobutyrate formate-lyase (EC 2.3.1.-) / Pyruvate formate-lyase (EC 2.3.1.54) |
| yhaR |
Gene: CKO_04513: Hypothetical protein TdcF in cluster with anaerobic degradation of L-threonine to propionate |
|
|
|
|
Gene: b3113: Hypothetical protein TdcF in cluster with anaerobic degradation of L-threonine to propionate |
|
|
|
|
|
|
Hypothetical protein TdcF in cluster with anaerobic degradation of L-threonine to propionate |
| tdcG |
Gene: CKO_04512: Predicted L-serine dehydratase (EC 4.3.1.17) TdcG |
|
|
|
|
Gene: b4471: Predicted L-serine dehydratase (EC 4.3.1.17) TdcG |
|
|
|
Gene: STM3240: Predicted L-serine dehydratase (EC 4.3.1.17) TdcG |
|
|
Predicted L-serine dehydratase (EC 4.3.1.17) TdcG |
| CRON 41. | |||||||||||||
| hcp |
*
Citrobacter koseri ATCC BAA-895 Site: position = -76 score = 4.37 sequence = TTGCGCTAAATCAA Gene: CKO_02206: Hydroxylamine reductase (EC 1.7.-.-) |
*
Edwardsiella tarda EIB202 Site: position = -113 score = 4.42 sequence = TTGCGTTATATCAA Gene: ETAE_2215: Hydroxylamine reductase (EC 1.7.-.-) |
*
Enterobacter sp. 638 Site: position = -110 score = 4.37 sequence = TTGCGCTAAATCAA Gene: Ent638_1390: Hydroxylamine reductase (EC 1.7.-.-) |
|
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -114 score = 4.37 sequence = TTGCGCTAAATCAA Gene: ECA2662: Hydroxylamine reductase (EC 1.7.-.-) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -110 score = 4.37 sequence = TTGCGCTAAATCAA Gene: b0873: Hydroxylamine reductase (EC 1.7.-.-) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -76 score = 4.37 sequence = TTGCGCTAAATCAA Gene: KPN_00907: Hydroxylamine reductase (EC 1.7.-.-) |
|
*
Proteus mirabilis HI4320 Site: position = -131 score = 4.36 sequence = TTGCGTTAGATCAA Gene: PMI2112: Hydroxylamine reductase (EC 1.7.-.-) |
*
Salmonella typhimurium LT2 Site: position = -110 score = 4.37 sequence = TTGCGCTAAATCAA Gene: STM0937: Hydroxylamine reductase (EC 1.7.-.-) |
*
Serratia proteamaculans 568 Site: position = -66 score = 4.37 sequence = TTGCGCTAAATCAA Gene: Spro_1666: Hydroxylamine reductase (EC 1.7.-.-) |
*
Yersinia pestis KIM Site: position = -115 score = 4.1 sequence = TTGCGTCAAATCAA Gene: y2819: Hydroxylamine reductase (EC 1.7.-.-) |
Hydroxylamine reductase (EC 1.7.-.-) |
| hcr |
Gene: CKO_02207: NADH oxidoreductase hcr (EC 1.-.-.-) |
Gene: ETAE_2216: NADH oxidoreductase hcr (EC 1.-.-.-) |
Gene: Ent638_1389: NADH oxidoreductase hcr (EC 1.-.-.-) |
|
Gene: ECA2663: NADH oxidoreductase hcr (EC 1.-.-.-) |
Gene: b0872: NADH oxidoreductase hcr (EC 1.-.-.-) |
Gene: KPN_00906: NADH oxidoreductase hcr (EC 1.-.-.-) |
|
Gene: PMI2111: NADH oxidoreductase hcr (EC 1.-.-.-) |
Gene: STM0936: NADH oxidoreductase hcr (EC 1.-.-.-) |
Gene: Spro_1665: NADH oxidoreductase hcr (EC 1.-.-.-) |
Gene: y2820: NADH oxidoreductase hcr (EC 1.-.-.-) |
NADH oxidoreductase hcr (EC 1.-.-.-) |
| CRON 42. | |||||||||||||
| fnr |
*
Citrobacter koseri ATCC BAA-895 Site: position = -83 score = 3.85 sequence = TTGATGTAAAGTAA Gene: CKO_01409: Fumarate and nitrate reduction regulatory protein |
*
Edwardsiella tarda EIB202 Site: position = -133 score = 3.44 sequence = GTGCTATACATCAC Site: position = -33 score = 4.55 sequence = TTGACCGATATCAA Gene: ETAE_1744: Fumarate and nitrate reduction regulatory protein |
*
Enterobacter sp. 638 Site: position = -33 score = 4.64 sequence = TTGACCAATATCAA Gene: Ent638_1853: Fumarate and nitrate reduction regulatory protein |
Gene: EAM_1775: Fumarate and nitrate reduction regulatory protein |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -34 score = 4.64 sequence = TTGACCAATATCAA Gene: ECA2207: Fumarate and nitrate reduction regulatory protein |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -33 score = 4.68 sequence = TTGACAAATATCAA Gene: b1334: Fumarate and nitrate reduction regulatory protein |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -327 score = 4.64 sequence = TTGACCAATATCAA Site: position = -185 score = 3.51 sequence = ATGAGCTTGATCAG Gene: KPN_01530: Fumarate and nitrate reduction regulatory protein |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -35 score = 3.42 sequence = TTGAAGGATATGAA Gene: plu2179: Fumarate and nitrate reduction regulatory protein |
*
Proteus mirabilis HI4320 Site: position = -40 score = 4.54 sequence = TTGACACATATCAA Gene: PMI1203: Fumarate and nitrate reduction regulatory protein |
*
Salmonella typhimurium LT2 Site: position = -33 score = 4.68 sequence = TTGACAAATATCAA Gene: STM1660.S: Fumarate and nitrate reduction regulatory protein |
*
Serratia proteamaculans 568 Site: position = -34 score = 4.44 sequence = TTGACGCATATCAA Gene: Spro_2582: Fumarate and nitrate reduction regulatory protein |
*
Yersinia pestis KIM Site: position = -32 score = 4.44 sequence = TTGACGCATATCAA Gene: y2132: Fumarate and nitrate reduction regulatory protein |
Fumarate and nitrate reduction regulatory protein |
| CRON 43. | |||||||||||||
| gdhA |
Gene: CKO_01789: NADP-specific glutamate dehydrogenase (EC 1.4.1.4) |
Gene: ETAE_3353: NADP-specific glutamate dehydrogenase (EC 1.4.1.4) |
Gene: Ent638_1685: NADP-specific glutamate dehydrogenase (EC 1.4.1.4) |
|
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -232 score = 4.72 sequence = TTGTTATATAACAA Gene: ECA0051: NADP-specific glutamate dehydrogenase (EC 1.4.1.4) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -397 score = 3.89 sequence = TTGATCCTGATAAA Gene: b1761: NADP-specific glutamate dehydrogenase (EC 1.4.1.4) |
Gene: KPN_01210: NADP-specific glutamate dehydrogenase (EC 1.4.1.4) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -272 score = 3.97 sequence = ATGATGAATGACAA Gene: plu0122: NADP-specific glutamate dehydrogenase (EC 1.4.1.4) |
*
Proteus mirabilis HI4320 Site: position = -176 score = 3.59 sequence = TTTAGTGAGGTCAA Gene: PMI3008: NADP-specific glutamate dehydrogenase (EC 1.4.1.4) |
*
Salmonella typhimurium LT2 Site: position = -51 score = 3.4 sequence = CTGATAAAACGCAA Gene: STM1299: NADP-specific glutamate dehydrogenase (EC 1.4.1.4) |
Gene: Spro_4692: NADP-specific glutamate dehydrogenase (EC 1.4.1.4) |
*
Yersinia pestis KIM Site: position = -231 score = 3.57 sequence = TTGAGTAACGTTAA Gene: y3858: NADP-specific glutamate dehydrogenase (EC 1.4.1.4) |
NADP-specific glutamate dehydrogenase (EC 1.4.1.4) |
| CRON 44. | |||||||||||||
| ECA0068 |
|
|
|
|
|
|
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -6 score = 4.03 sequence = TTGATTATGCACAA Gene: KPN_03849: Transcriptional regulator, LysR family |
|
|
|
|
|
Transcriptional regulator, LysR family |
| nikA |
*
Citrobacter koseri ATCC BAA-895 Site: position = -228 score = 3.84 sequence = TTGATCCAGAACAC Gene: CKO_04926: Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) |
*
Edwardsiella tarda EIB202 Site: position = -80 score = 3.38 sequence = TTGATCCATCACAC Gene: ETAE_1379: Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) |
*
Enterobacter sp. 638 Site: position = -85 score = 3.48 sequence = TTGATCCAGCACAG Gene: Ent638_1834: Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) |
|
|
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -86 score = 4.0 sequence = TTGATCCAGAACAG Gene: b3476: Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) |
Gene: KPN_03850: Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) |
|
|
|
|
|
Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) |
| nikB |
Gene: CKO_04927: Nickel transport system permease protein NikB (TC 3.A.1.5.3) |
Gene: ETAE_1378: Nickel transport system permease protein NikB (TC 3.A.1.5.3) |
Gene: Ent638_1835: Nickel transport system permease protein NikB (TC 3.A.1.5.3) |
|
|
Gene: b3477: Nickel transport system permease protein NikB (TC 3.A.1.5.3) |
Gene: KPN_03851: Nickel transport system permease protein NikB (TC 3.A.1.5.3) |
|
|
|
|
|
Nickel transport system permease protein NikB (TC 3.A.1.5.3) |
| nikC |
Gene: CKO_04928: Nickel transport system permease protein NikC (TC 3.A.1.5.3) |
Gene: ETAE_1377: Nickel transport system permease protein NikC (TC 3.A.1.5.3) |
Gene: Ent638_1836: Nickel transport system permease protein NikC (TC 3.A.1.5.3) |
|
|
Gene: b3478: Nickel transport system permease protein NikC (TC 3.A.1.5.3) |
Gene: KPN_03852: Nickel transport system permease protein NikC (TC 3.A.1.5.3) |
|
|
|
|
|
Nickel transport system permease protein NikC (TC 3.A.1.5.3) |
| nikD |
Gene: CKO_04929: Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3) |
Gene: ETAE_1376: Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3) |
Gene: Ent638_1837: Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3) |
|
|
Gene: b3479: Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3) |
Gene: KPN_03853: Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3) |
|
|
|
|
|
Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3) |
| nikE |
Gene: CKO_04930: Nickel transport ATP-binding protein NikE (TC 3.A.1.5.3) |
Gene: ETAE_1375: Nickel transport ATP-binding protein NikE (TC 3.A.1.5.3) |
Gene: Ent638_1838: Nickel transport ATP-binding protein NikE (TC 3.A.1.5.3) |
|
|
Gene: b3480: Nickel transport ATP-binding protein NikE (TC 3.A.1.5.3) |
Gene: KPN_03854: Nickel transport ATP-binding protein NikE (TC 3.A.1.5.3) |
|
|
|
|
|
Nickel transport ATP-binding protein NikE (TC 3.A.1.5.3) |
| nikR |
Gene: CKO_04931: Nickel responsive regulator NikR |
Gene: ETAE_0262: Nickel responsive regulator NikR |
Gene: Ent638_1839: Nickel responsive regulator NikR |
|
|
Gene: b3481: Nickel responsive regulator NikR |
Gene: KPN_03855: Nickel responsive regulator NikR |
|
|
Gene: STM3584: Nickel responsive regulator NikR |
|
|
Nickel responsive regulator NikR |
| CRON 45. | |||||||||||||
| yecR |
*
Citrobacter koseri ATCC BAA-895 Site: position = -288 score = 3.71 sequence = CTGTTTTCCATCAT Gene: CKO_01043: putative outer membrane lipoprotein |
|
Gene: Ent638_2485: putative outer membrane lipoprotein |
|
|
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -179 score = 3.68 sequence = GTGATACAAATCAC Gene: b1904: putative outer membrane lipoprotein |
|
|
|
*
Salmonella typhimurium LT2 Site: position = -97 score = 3.61 sequence = TTACCTTTAATCAA Gene: STM1934: putative outer membrane lipoprotein |
|
|
putative outer membrane lipoprotein |
| CRON 46. | |||||||||||||
| hlyE |
|
|
|
|
|
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -125 score = 3.69 sequence = TTAATAGAAATAAA Site: position = -140 score = 4.56 sequence = TTGATATTTATCAT Gene: b1182: hemolysin E |
|
|
|
|
|
|
hemolysin E |
| CRON 47. | |||||||||||||
| pepT |
*
Citrobacter koseri ATCC BAA-895 Site: position = -42 score = 3.31 sequence = TTGCTTATTAATAA Gene: CKO_01926: Tripeptide aminopeptidase (EC 3.4.11.4) |
Gene: ETAE_1880: Tripeptide aminopeptidase (EC 3.4.11.4) |
Gene: Ent638_1640: Tripeptide aminopeptidase (EC 3.4.11.4) |
|
Gene: ECA2448: Tripeptide aminopeptidase (EC 3.4.11.4) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -121 score = 3.66 sequence = TTTATATTCATTAA Gene: b1127: Tripeptide aminopeptidase (EC 3.4.11.4) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -347 score = 3.46 sequence = TTGTTGATGGTCAG Gene: KPN_01133: Tripeptide aminopeptidase (EC 3.4.11.4) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -156 score = 3.82 sequence = TTGATGAAAAGCAT Gene: plu2810: Tripeptide aminopeptidase (EC 3.4.11.4) |
*
Proteus mirabilis HI4320 Site: position = -92 score = 3.66 sequence = TTGATTTAATTAAT Gene: PMI0882: Tripeptide aminopeptidase (EC 3.4.11.4) |
*
Salmonella typhimurium LT2 Site: position = -375 score = 4.11 sequence = TTGTTAATGGTCAA Gene: STM1227: Tripeptide aminopeptidase (EC 3.4.11.4) |
*
Serratia proteamaculans 568 Site: position = -96 score = 3.62 sequence = ATGATTTCCGTTAA Gene: Spro_2009: Tripeptide aminopeptidase (EC 3.4.11.4) |
*
Yersinia pestis KIM Site: position = -23 score = 4.01 sequence = TTGATCATGATCAC Gene: y1791: Tripeptide aminopeptidase (EC 3.4.11.4) |
Tripeptide aminopeptidase (EC 3.4.11.4) |
| CRON 48. | |||||||||||||
| ycaC |
*
Citrobacter koseri ATCC BAA-895 Site: position = -145 score = 4.69 sequence = TTGACCTAAAACAA Gene: CKO_02173: Nicotinamidase family protein YcaC |
|
|
|
|
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -146 score = 3.93 sequence = TTGAACTAACACAA Site: position = 22 score = 3.83 sequence = TTGATAAAAATGAT Gene: b0897: Nicotinamidase family protein YcaC |
|
|
|
|
Gene: Spro_1001: Nicotinamidase family protein YcaC |
|
Nicotinamidase family protein YcaC |
| CRON 49. | |||||||||||||
| yhcC |
Gene: CKO_04616: COG1242: Predicted Fe-S oxidoreductase |
Gene: ETAE_0528: COG1242: Predicted Fe-S oxidoreductase |
*
Enterobacter sp. 638 Site: position = -65 score = 3.69 sequence = TTTATTCAAATGAA Site: position = -32 score = 4.02 sequence = TTGATCCAGGTCAT Gene: Ent638_3655: COG1242: Predicted Fe-S oxidoreductase |
|
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -70 score = 3.74 sequence = TTGATCGCGGTCAT Gene: ECA0313: COG1242: Predicted Fe-S oxidoreductase |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -75 score = 4.02 sequence = TTGATCCAGGTCAT Gene: b3211: COG1242: Predicted Fe-S oxidoreductase |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -75 score = 4.02 sequence = TTGATCCAGGTCAT Gene: KPN_03623: COG1242: Predicted Fe-S oxidoreductase |
|
Gene: PMI1091: COG1242: Predicted Fe-S oxidoreductase |
*
Salmonella typhimurium LT2 Site: position = -75 score = 4.02 sequence = TTGATCCAGGTCAT Gene: STM3329: COG1242: Predicted Fe-S oxidoreductase |
*
Serratia proteamaculans 568 Site: position = -74 score = 4.16 sequence = TTGATCTCTGTCAT Gene: Spro_4343: COG1242: Predicted Fe-S oxidoreductase |
*
Yersinia pestis KIM Site: position = -133 score = 4.16 sequence = TTGATCTCTGTCAT Gene: y0127: COG1242: Predicted Fe-S oxidoreductase |
COG1242: Predicted Fe-S oxidoreductase |
| CRON 50. | |||||||||||||
| dcuA |
*
Citrobacter koseri ATCC BAA-895 Site: position = -25 score = 4.42 sequence = TTGTTAAACAACAA Gene: CKO_03697: Anaerobic C4-dicarboxylate transporter |
Gene: ETAE_0310: Anaerobic C4-dicarboxylate transporter |
*
Enterobacter sp. 638 Site: position = -25 score = 3.83 sequence = TTGTTAATAAGCAA Gene: Ent638_0325: Anaerobic C4-dicarboxylate transporter |
Gene: EAM_0415: Anaerobic C4-dicarboxylate transporter |
Gene: ECA0620: Anaerobic C4-dicarboxylate transporter |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -25 score = 4.54 sequence = TTGTTAAAAAACAA Gene: b4138: Anaerobic C4-dicarboxylate transporter |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -25 score = 4.54 sequence = TTGTTAAAAAACAA Gene: KPN_04528: Anaerobic C4-dicarboxylate transporter |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -136 score = 3.66 sequence = TTGAATATAATAAA Gene: plu4138: Anaerobic C4-dicarboxylate transporter |
*
Proteus mirabilis HI4320 Site: position = -26 score = 3.66 sequence = TTTAATTATCTCAA Gene: PMI2547: Anaerobic C4-dicarboxylate transporter |
*
Salmonella typhimurium LT2 Site: position = -25 score = 4.42 sequence = TTGTTAAACAACAA Gene: STM4325: Anaerobic C4-dicarboxylate transporter |
Gene: Spro_0405: Anaerobic C4-dicarboxylate transporter |
Gene: y0605: Anaerobic C4-dicarboxylate transporter |
Anaerobic C4-dicarboxylate transporter |
| CRON 51. | |||||||||||||
| yfiD |
*
Citrobacter koseri ATCC BAA-895 Site: position = -123 score = 5.56 sequence = Site: position = -176 score = 5.05 sequence = Gene: CKO_00205: Stress-induced alternate pyruvate formate-lyase subunit |
*
Edwardsiella tarda EIB202 Site: position = -27 score = 4.28 sequence = TTGCTCTATCTCAA Gene: ETAE_2732: Stress-induced alternate pyruvate formate-lyase subunit |
*
Enterobacter sp. 638 Site: position = -172 score = 5.15 sequence = Site: position = -120 score = 5.1 sequence = Gene: Ent638_3064: Stress-induced alternate pyruvate formate-lyase subunit |
|
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -55 score = 3.7 sequence = TTTAACTACGTCAA Site: position = -195 score = 5.25 sequence = TTGATTTAAGTCAA Site: position = -248 score = 5.15 sequence = TTGATATAAAACAA Gene: ECA3288: Stress-induced alternate pyruvate formate-lyase subunit |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -174 score = 5.05 sequence = TTGATGTAAAACAA Site: position = -121 score = 5.56 sequence = TTGATTTAAATCAA Gene: b2579: Stress-induced alternate pyruvate formate-lyase subunit |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -173 score = 5.05 sequence = TTGATGTAAAACAA Site: position = -120 score = 5.47 sequence = TTGATTTATATCAA Gene: KPN_02902: Stress-induced alternate pyruvate formate-lyase subunit |
|
*
Proteus mirabilis HI4320 Site: position = -180 score = 5.25 sequence = TTGATTTAAAACAA Site: position = -127 score = 5.09 sequence = TTGATATTTATCAA Gene: PMI1898: Stress-induced alternate pyruvate formate-lyase subunit |
*
Salmonella typhimurium LT2 Site: position = -124 score = 5.56 sequence = Site: position = -177 score = 5.05 sequence = Gene: STM2646: Stress-induced alternate pyruvate formate-lyase subunit |
*
Serratia proteamaculans 568 Site: position = -189 score = 4.2 sequence = TTGACATAAAACAT Site: position = -136 score = 4.86 sequence = TTGACTTTAATCAA Gene: Spro_3682: Stress-induced alternate pyruvate formate-lyase subunit |
*
Yersinia pestis KIM Site: position = -180 score = 4.62 sequence = TTGATATAAAACAT Site: position = -127 score = 5.13 sequence = TTGATTTGAATCAA Gene: y1282: Stress-induced alternate pyruvate formate-lyase subunit |
Stress-induced alternate pyruvate formate-lyase subunit |
| CRON 52. | |||||||||||||
| gnd |
*
Citrobacter koseri ATCC BAA-895 Site: position = -337 score = 4.04 sequence = TTGATTACTATCTA Gene: CKO_00756: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) |
Gene: ETAE_1212: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) |
*
Enterobacter sp. 638 Site: position = -112 score = 3.68 sequence = GTGACATAGATCAG Gene: Ent638_2642: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) |
*
Erwinia amylovora ATCC 49946 Site: position = -264 score = 3.8 sequence = TTCTCTTAAGTCAA Site: position = -169 score = 4.0 sequence = TTTTTTTTAAACAA Gene: EAM_2150: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -228 score = 3.32 sequence = TTGAGTGGTAACAT Gene: ECA1444: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -375 score = 3.37 sequence = ATGGCTTCGATCAA Gene: b2029: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -322 score = 3.66 sequence = TTTTTATAGTTCAA Gene: KPN_02499: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) |
Gene: plu1560: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) |
*
Proteus mirabilis HI4320 Site: position = -7 score = 3.69 sequence = TTATTTCATGTCAA Gene: PMI0655: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) |
Gene: STM2081: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) |
*
Serratia proteamaculans 568 Site: position = -384 score = 3.32 sequence = ATTATTTGAATTAA Gene: Spro_1608: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) |
Gene: y2629: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) |
6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) |
| CRON 53. | |||||||||||||
| sodA |
Gene: CKO_03093: Manganese superoxide dismutase (EC 1.15.1.1) |
|
*
Enterobacter sp. 638 Site: position = -132 score = 3.64 sequence = ATGATACAAAAAAA Gene: Ent638_4063: Manganese superoxide dismutase (EC 1.15.1.1) |
Gene: EAM_3427: Manganese superoxide dismutase (EC 1.15.1.1) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -143 score = 3.55 sequence = ATGAAGTAAAGCAA Gene: ECA0092: Manganese superoxide dismutase (EC 1.15.1.1) |
Gene: b3908: Manganese superoxide dismutase (EC 1.15.1.1) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -146 score = 4.25 sequence = TTGTTCTACATCAC Gene: KPN_04217: Manganese superoxide dismutase (EC 1.15.1.1) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -346 score = 3.57 sequence = TTATGTCAAATCAA Gene: plu0075: Manganese superoxide dismutase (EC 1.15.1.1) |
*
Proteus mirabilis HI4320 Site: position = -85 score = 3.98 sequence = ATGATTTTCATTAA Site: position = -164 score = 3.85 sequence = TTTATTTAAAATAA Gene: PMI3036: Manganese superoxide dismutase (EC 1.15.1.1) |
Gene: STM4055: Manganese superoxide dismutase (EC 1.15.1.1) |
Gene: Spro_0081: Manganese superoxide dismutase (EC 1.15.1.1) |
Gene: y4080: Manganese superoxide dismutase (EC 1.15.1.1) |
Manganese superoxide dismutase (EC 1.15.1.1) |
| CRON 54. | |||||||||||||
| napF |
|
|
|
|
|
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -46 score = 3.24 sequence = TTGGTCGCTCTCAA Gene: b2208: Ferredoxin-type protein NapF (periplasmic nitrate reductase) |
|
|
|
*
Salmonella typhimurium LT2 Site: position = -90 score = 3.28 sequence = CTTATTTACAAAAA Gene: STM2261: Ferredoxin-type protein NapF (periplasmic nitrate reductase) |
|
|
Ferredoxin-type protein NapF (periplasmic nitrate reductase) |
| napD |
*
Citrobacter koseri ATCC BAA-895 Site: position = -35 score = 3.44 sequence = TTGCCCGACATCAG Gene: CKO_00568: Periplasmic nitrate reductase component NapD |
|
|
|
|
Gene: b2207: Periplasmic nitrate reductase component NapD |
|
|
|
Gene: STM2260: Periplasmic nitrate reductase component NapD |
|
|
Periplasmic nitrate reductase component NapD |
| napA |
Gene: CKO_00569: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
|
|
|
|
Gene: b2206: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
|
|
|
Gene: STM2259: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
|
|
Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
| napG |
Gene: CKO_00570: Ferredoxin-type protein NapG (periplasmic nitrate reductase) |
|
|
|
|
Gene: b2205: Ferredoxin-type protein NapG (periplasmic nitrate reductase) |
|
|
|
Gene: STM2258: Ferredoxin-type protein NapG (periplasmic nitrate reductase) |
|
|
Ferredoxin-type protein NapG (periplasmic nitrate reductase) |
| napH |
Gene: CKO_00571: Polyferredoxin NapH (periplasmic nitrate reductase) |
|
|
|
|
Gene: b2204: Polyferredoxin NapH (periplasmic nitrate reductase) |
|
|
|
Gene: STM2257: Polyferredoxin NapH (periplasmic nitrate reductase) |
|
|
Polyferredoxin NapH (periplasmic nitrate reductase) |
| napB |
Gene: CKO_00572: Nitrate reductase cytochrome c550-type subunit |
|
|
|
|
Gene: b2203: Nitrate reductase cytochrome c550-type subunit |
|
|
|
Gene: STM2256: Nitrate reductase cytochrome c550-type subunit |
|
|
Nitrate reductase cytochrome c550-type subunit |
| napC |
Gene: CKO_00573: Cytochrome c-type protein NapC |
|
|
|
|
Gene: b2202: Cytochrome c-type protein NapC |
|
|
|
Gene: STM2255: Cytochrome c-type protein NapC |
|
|
Cytochrome c-type protein NapC |
| ccmA |
Gene: CKO_00574: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA |
*
Edwardsiella tarda EIB202 Site: position = -396 score = 4.29 sequence = TTGCTATATATCAG Site: position = 5 score = 3.47 sequence = GCGATTAAAATCAG Gene: ETAE_2461: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA |
|
Gene: EAM_2358: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -106 score = 4.4 sequence = TTGATCTCAATAAA Gene: ECA1882: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA |
Gene: b2201: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA |
Gene: KPN_02081: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA |
|
|
2
Salmonella typhimurium LT2 Gene: STM2254: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA Gene: STM3819: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA |
Gene: Spro_3391: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA |
*
Yersinia pestis KIM Site: position = -302 score = 3.97 sequence = TGGATTTTTAACAA Gene: y1567: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA |
ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA |
| ccmB |
Gene: CKO_00575: ABC transporter involved in cytochrome c biogenesis, CcmB subunit |
Gene: ETAE_2460: ABC transporter involved in cytochrome c biogenesis, CcmB subunit |
|
Gene: EAM_2357: ABC transporter involved in cytochrome c biogenesis, CcmB subunit |
Gene: ECA1883: ABC transporter involved in cytochrome c biogenesis, CcmB subunit |
Gene: b2200: ABC transporter involved in cytochrome c biogenesis, CcmB subunit |
Gene: KPN_02080: ABC transporter involved in cytochrome c biogenesis, CcmB subunit |
|
|
2
Salmonella typhimurium LT2 Gene: STM2253: ABC transporter involved in cytochrome c biogenesis, CcmB subunit Gene: STM3818: ABC transporter involved in cytochrome c biogenesis, CcmB subunit |
Gene: Spro_3390: ABC transporter involved in cytochrome c biogenesis, CcmB subunit |
Gene: y1568: ABC transporter involved in cytochrome c biogenesis, CcmB subunit |
ABC transporter involved in cytochrome c biogenesis, CcmB subunit |
| ccmC |
*
Citrobacter koseri ATCC BAA-895 Site: position = -136 score = 3.61 sequence = TTGACTGGCGACAA Gene: CKO_00577: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE |
*
Edwardsiella tarda EIB202 Site: position = -114 score = 3.52 sequence = TTATTGTATATAAA Gene: ETAE_2459: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE |
|
Gene: EAM_2356: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE |
Gene: ECA1884: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE |
Gene: b2199: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE |
Gene: KPN_02079: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE |
|
|
2
Salmonella typhimurium LT2 Gene: STM2252: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE Gene: STM3817: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE |
Gene: Spro_3389: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE |
Gene: y1569: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE |
Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE |
| ccmD |
Gene: CKO_00578: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE |
Gene: ETAE_2458: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE |
|
Gene: EAM_2355: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE |
Gene: ECA1885: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE |
Gene: b2198: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE |
Gene: KPN_02078: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE |
|
|
2
Salmonella typhimurium LT2 Gene: STM2251: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE Gene: STM3816: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE |
Gene: Spro_3388: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE |
Gene: y1570: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE |
Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE |
| ccmE |
Gene: CKO_00579: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
Gene: ETAE_2457: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
|
Gene: EAM_2354: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
Gene: ECA1886: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
Gene: b2197: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
Gene: KPN_02077: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
|
|
2
Salmonella typhimurium LT2 Gene: STM2250: Cytochrome c-type biogenesis protein CcmE, heme chaperone Gene: STM3815: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
Gene: Spro_3387: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
Gene: y1571: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
Cytochrome c-type biogenesis protein CcmE, heme chaperone |
| ccmF |
*
Citrobacter koseri ATCC BAA-895 Site: position = -19 score = 3.29 sequence = TTTATAAGGATAAA Gene: CKO_00581: Cytochrome c heme lyase subunit CcmF |
Gene: ETAE_2456: Cytochrome c heme lyase subunit CcmF |
|
Gene: EAM_2353: Cytochrome c heme lyase subunit CcmF |
Gene: ECA1887: Cytochrome c heme lyase subunit CcmF |
Gene: b2196: Cytochrome c heme lyase subunit CcmF |
Gene: KPN_02076: Cytochrome c heme lyase subunit CcmF |
|
|
2
Salmonella typhimurium LT2 Gene: STM2249: Cytochrome c heme lyase subunit CcmF Gene: STM3814: Cytochrome c heme lyase subunit CcmF |
Gene: Spro_3386: Cytochrome c heme lyase subunit CcmF |
Gene: y1572: Cytochrome c heme lyase subunit CcmF |
Cytochrome c heme lyase subunit CcmF |
| ccmG |
Gene: CKO_00582: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase |
Gene: ETAE_2455: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase |
|
Gene: EAM_2352: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase |
Gene: ECA1888: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase |
Gene: b2195: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase |
Gene: KPN_02075: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase |
|
|
2
Salmonella typhimurium LT2 Gene: STM2248: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase Gene: STM3813: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase |
Gene: Spro_3385: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase |
Gene: y1573: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase |
Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase |
| ccmH |
Gene: CKO_00583: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH |
2
Edwardsiella tarda EIB202 Gene: ETAE_2454: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH Gene: ETAE_2453: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH |
|
2
Erwinia amylovora ATCC 49946 Gene: EAM_2351: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH Gene: EAM_2350: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH |
2
Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA1889: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH Gene: ECA1890: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH |
Gene: b2194: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH |
2
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_02074: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH Gene: KPN_02073: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH |
|
|
2
Salmonella typhimurium LT2 Gene: STM3812: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH Gene: STM2247: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH |
2
Serratia proteamaculans 568 Gene: Spro_3383: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH Gene: Spro_3384: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH |
*2
Yersinia pestis KIM Gene: y1574: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH Site: position = 12 score = 3.64 sequence = CTGATAGTCATCAT Gene: y1575: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH |
Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH |
| KPN_02084 |
|
|
|
|
|
|
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -326 score = 3.37 sequence = GTGATACAAGTCAC Gene: KPN_02084: hypothetical protein |
|
|
|
|
|
hypothetical protein |
| KPN_02083 |
|
|
|
|
|
|
Gene: KPN_02083: Monooxygenase, FAD-binding; Glucose-methanol-choline oxidoreductase |
|
|
|
|
|
Monooxygenase, FAD-binding; Glucose-methanol-choline oxidoreductase |
| KPN_02082 |
|
|
|
|
|
|
Gene: KPN_02082: gluconate dehydrogenase cytochrome c subunit, putative |
|
|
|
|
|
gluconate dehydrogenase cytochrome c subunit, putative |
| yhjA |
|
|
|
|
|
|
|
|
|
*
Salmonella typhimurium LT2 Site: position = -110 score = 4.72 sequence = TTGATACCAATCAA Gene: STM3820: Cytochrome c551 peroxidase (EC 1.11.1.5) |
|
|
Cytochrome c551 peroxidase (EC 1.11.1.5) |
| CRON 55. | |||||||||||||
| ybdN |
*
Citrobacter koseri ATCC BAA-895 Site: position = -295 score = 3.76 sequence = TTAATATTGATCAG Gene: CKO_02557: Predicted sulfotransferase |
|
|
|
|
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -359 score = 3.7 sequence = TTGCTGACAATCAT Site: position = -150 score = 4.23 sequence = TTGATATATAACTA Gene: b0602: Predicted sulfotransferase |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -221 score = 3.51 sequence = ACGATCTACATTAA Gene: KPN_00647: Predicted sulfotransferase |
|
|
Gene: STM0605: Predicted sulfotransferase |
|
|
Predicted sulfotransferase |
| CRON 56. | |||||||||||||
| cyoA |
*
Citrobacter koseri ATCC BAA-895 Site: position = -267 score = 3.7 sequence = TTGTTGATAATTAA Gene: CKO_02729: Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) |
|
Gene: Ent638_0899: Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) |
*
Erwinia amylovora ATCC 49946 Site: position = -207 score = 3.72 sequence = GTTATTTAAATCAG Gene: EAM_0985: Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) |
Gene: ECA1143: Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -241 score = 3.74 sequence = TTGTTTTATTTCAC Gene: b0432: Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -49 score = 3.68 sequence = TTGAGGTCGTTCAA Gene: KPN_00394: Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -336 score = 3.82 sequence = TTGTGAGCTATCAA Gene: plu3875: Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) |
*
Proteus mirabilis HI4320 Site: position = 9 score = 3.58 sequence = ATGAAATACATAAA Gene: PMI0108: Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) |
*
Salmonella typhimurium LT2 Site: position = -268 score = 3.4 sequence = TTTATTGATAATAA Gene: STM0443: Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) |
*
Serratia proteamaculans 568 Site: position = -293 score = 3.64 sequence = TTCTTTTACATTAA Gene: Spro_1090: Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) |
*
Yersinia pestis KIM Site: position = -223 score = 3.53 sequence = TTGTTTTTCCTTAA Gene: y1021: Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) |
Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) |
| cyoB |
Gene: CKO_02730: Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) |
|
Gene: Ent638_0898: Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) |
Gene: EAM_0984: Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) |
Gene: ECA1142: Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) |
Gene: b0431: Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) |
Gene: KPN_00393: Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) |
Gene: plu3876: Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) |
Gene: PMI0107: Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) |
Gene: STM0442: Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) |
Gene: Spro_1089: Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) |
Gene: y1020: Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) |
Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) |
| cyoC |
Gene: CKO_02731: Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) |
|
Gene: Ent638_0897: Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) |
Gene: EAM_0983: Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) |
Gene: ECA1141: Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) |
Gene: b0430: Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) |
Gene: KPN_00392: Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) |
Gene: plu3877: Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) |
Gene: PMI0106: Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) |
Gene: STM0441: Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) |
Gene: Spro_1088: Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) |
Gene: y1019: Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) |
Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) |
| cyoD |
Gene: CKO_02732: Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) |
|
Gene: Ent638_0896: Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) |
Gene: EAM_0982: Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) |
Gene: ECA1140: Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) |
Gene: b0429: Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) |
Gene: KPN_00391: Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) |
Gene: plu3878: Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) |
Gene: PMI0105A: Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) |
Gene: STM0440: Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) |
Gene: Spro_1087: Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) |
|
Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) |
| cyoE |
Gene: CKO_02733: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
|
Gene: Ent638_0895: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
Gene: EAM_0981: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
Gene: ECA1139: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
Gene: b0428: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
Gene: KPN_00390: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
Gene: plu3879: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
Gene: PMI0105: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
Gene: STM0439: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
Gene: Spro_1086: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
Gene: y1018: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
| CRON 57. | |||||||||||||
| moaA |
*
Citrobacter koseri ATCC BAA-895 Site: position = -253 score = 4.74 sequence = CTGATGTATATCAA Gene: CKO_02345: Molybdenum cofactor biosynthesis protein MoaA |
*
Edwardsiella tarda EIB202 Site: position = -380 score = 3.86 sequence = GTGACATGTATCAA Gene: ETAE_2347: Molybdenum cofactor biosynthesis protein MoaA |
*
Enterobacter sp. 638 Site: position = -236 score = 4.44 sequence = ATGACGTATATCAA Gene: Ent638_1273: Molybdenum cofactor biosynthesis protein MoaA |
*
Erwinia amylovora ATCC 49946 Site: position = -212 score = 4.23 sequence = TCGCTATATATCAA Gene: EAM_1218: Molybdenum cofactor biosynthesis protein MoaA |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -321 score = 3.54 sequence = ATGACCTGAGACAA Gene: ECA2817: Molybdenum cofactor biosynthesis protein MoaA |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -263 score = 4.86 sequence = ATGATGTATATCAA Gene: b0781: Molybdenum cofactor biosynthesis protein MoaA |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -257 score = 3.99 sequence = CTGACCGACATCAA Gene: KPN_00810: Molybdenum cofactor biosynthesis protein MoaA |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -155 score = 3.72 sequence = TCGTTTTACATTAA Gene: plu1499: Molybdenum cofactor biosynthesis protein MoaA |
Gene: PMI0610: Molybdenum cofactor biosynthesis protein MoaA |
*
Salmonella typhimurium LT2 Site: position = -264 score = 4.96 sequence = ATGATATATATCAA Gene: STM0802: Molybdenum cofactor biosynthesis protein MoaA |
*
Serratia proteamaculans 568 Site: position = -312 score = 3.7 sequence = GTGATTCCGGTCAA Gene: Spro_1320: Molybdenum cofactor biosynthesis protein MoaA |
*
Yersinia pestis KIM Site: position = -310 score = 4.31 sequence = GTGATTTTAAACAA Gene: y3023: Molybdenum cofactor biosynthesis protein MoaA |
Molybdenum cofactor biosynthesis protein MoaA |
| moaB |
Gene: CKO_02344: Molybdenum cofactor biosynthesis protein MoaB |
|
Gene: Ent638_1274: Molybdenum cofactor biosynthesis protein MoaB |
Gene: EAM_1219: Molybdenum cofactor biosynthesis protein MoaB |
Gene: ECA2816: Molybdenum cofactor biosynthesis protein MoaB |
Gene: b0782: Molybdenum cofactor biosynthesis protein MoaB |
Gene: KPN_00811: Molybdenum cofactor biosynthesis protein MoaB |
|
|
Gene: STM0803: Molybdenum cofactor biosynthesis protein MoaB |
Gene: Spro_1321: Molybdenum cofactor biosynthesis protein MoaB |
|
Molybdenum cofactor biosynthesis protein MoaB |
| moaC |
Gene: CKO_02343: Molybdenum cofactor biosynthesis protein MoaC |
Gene: ETAE_2346: Molybdenum cofactor biosynthesis protein MoaC |
Gene: Ent638_1275: Molybdenum cofactor biosynthesis protein MoaC |
Gene: EAM_1220: Molybdenum cofactor biosynthesis protein MoaC |
Gene: ECA2815: Molybdenum cofactor biosynthesis protein MoaC |
Gene: b0783: Molybdenum cofactor biosynthesis protein MoaC |
Gene: KPN_00812: Molybdenum cofactor biosynthesis protein MoaC |
Gene: plu1500: Molybdenum cofactor biosynthesis protein MoaC |
Gene: PMI0611: Molybdenum cofactor biosynthesis protein MoaC |
Gene: STM0804: Molybdenum cofactor biosynthesis protein MoaC |
Gene: Spro_1322: Molybdenum cofactor biosynthesis protein MoaC |
*
Yersinia pestis KIM Site: position = -222 score = 3.72 sequence = GTGATGATCAACAA Gene: y3021: Molybdenum cofactor biosynthesis protein MoaC |
Molybdenum cofactor biosynthesis protein MoaC |
| moaD |
Gene: CKO_02342: Molybdenum cofactor biosynthesis protein MoaD |
Gene: ETAE_2345: Molybdenum cofactor biosynthesis protein MoaD |
Gene: Ent638_1276: Molybdenum cofactor biosynthesis protein MoaD |
Gene: EAM_1221: Molybdenum cofactor biosynthesis protein MoaD |
Gene: ECA2814: Molybdenum cofactor biosynthesis protein MoaD |
Gene: b0784: Molybdenum cofactor biosynthesis protein MoaD |
Gene: KPN_00813: Molybdenum cofactor biosynthesis protein MoaD |
Gene: plu1501: Molybdenum cofactor biosynthesis protein MoaD |
Gene: PMI0612: Molybdenum cofactor biosynthesis protein MoaD |
Gene: STM0805: Molybdenum cofactor biosynthesis protein MoaD |
Gene: Spro_1323: Molybdenum cofactor biosynthesis protein MoaD |
Gene: y3020: Molybdenum cofactor biosynthesis protein MoaD |
Molybdenum cofactor biosynthesis protein MoaD |
| moaE |
Gene: CKO_02341: Molybdenum cofactor biosynthesis protein MoaE |
Gene: ETAE_2344: Molybdenum cofactor biosynthesis protein MoaE |
Gene: Ent638_1277: Molybdenum cofactor biosynthesis protein MoaE |
Gene: EAM_1222: Molybdenum cofactor biosynthesis protein MoaE |
Gene: ECA2813: Molybdenum cofactor biosynthesis protein MoaE |
Gene: b0785: Molybdenum cofactor biosynthesis protein MoaE |
Gene: KPN_00814: Molybdenum cofactor biosynthesis protein MoaE |
Gene: plu1502: Molybdenum cofactor biosynthesis protein MoaE |
Gene: PMI0613: Molybdenum cofactor biosynthesis protein MoaE |
Gene: STM0806: Molybdenum cofactor biosynthesis protein MoaE |
Gene: Spro_1324: Molybdenum cofactor biosynthesis protein MoaE |
Gene: y3019: Molybdenum cofactor biosynthesis protein MoaE |
Molybdenum cofactor biosynthesis protein MoaE |
| CRON 58. | |||||||||||||
| ung |
*
Citrobacter koseri ATCC BAA-895 Site: position = -209 score = 5.56 sequence = TTGATTTAAATCAA Site: position = -156 score = 5.1 sequence = TTGTTTTACATCAA Gene: CKO_00204: Uracil-DNA glycosylase (EC 3.2.2.27) |
*
Edwardsiella tarda EIB202 Site: position = -227 score = 4.69 sequence = ATGTTTTACATCAA Site: position = -280 score = 5.42 sequence = TTGATCTAAATCAA Site: position = -396 score = 4.05 sequence = TTGAGATAGAGCAA Gene: ETAE_2734: Uracil-DNA glycosylase (EC 3.2.2.27) |
*
Enterobacter sp. 638 Site: position = 34 score = 4.25 sequence = CTGATGAAAAACAA Site: position = -194 score = 5.0 sequence = TTGACCTAAATCAA Site: position = -142 score = 5.13 sequence = TTGTTTTATATCAA Gene: Ent638_3065: Uracil-DNA glycosylase (EC 3.2.2.27) |
*
Erwinia amylovora ATCC 49946 Site: position = -177 score = 4.95 sequence = TTGATGCAAATCAA Gene: EAM_2526: Uracil-DNA glycosylase (EC 3.2.2.27) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -228 score = 5.14 sequence = TTGACTTAAATCAA Site: position = -175 score = 5.13 sequence = TTGTTTTATATCAA Gene: ECA3289: Uracil-DNA glycosylase (EC 3.2.2.27) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -197 score = 5.56 sequence = TTGATTTAAATCAA Site: position = -144 score = 5.1 sequence = TTGTTTTACATCAA Gene: b2580: Uracil-DNA glycosylase (EC 3.2.2.27) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -153 score = 5.1 sequence = TTGTTTTACATCAA Site: position = -206 score = 5.46 sequence = TTGATATAAATCAA Gene: KPN_02903: Uracil-DNA glycosylase (EC 3.2.2.27) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -233 score = 4.14 sequence = TTGATTCAGAACAG Gene: plu3371: Uracil-DNA glycosylase (EC 3.2.2.27) |
*
Proteus mirabilis HI4320 Site: position = -168 score = 5.22 sequence = TTGTTTTAAATCAA Site: position = -221 score = 5.1 sequence = TTGATAAATATCAA Gene: PMI1899: Uracil-DNA glycosylase (EC 3.2.2.27) |
*
Salmonella typhimurium LT2 Site: position = -208 score = 5.56 sequence = TTGATTTAAATCAA Site: position = -155 score = 5.1 sequence = TTGTTTTACATCAA Gene: STM2647: Uracil-DNA glycosylase (EC 3.2.2.27) |
*
Serratia proteamaculans 568 Site: position = -222 score = 4.98 sequence = TTGATTAAAGTCAA Site: position = -169 score = 4.41 sequence = ATGTTTTATGTCAA Gene: Spro_3683: Uracil-DNA glycosylase (EC 3.2.2.27) |
*
Yersinia pestis KIM Site: position = -160 score = 4.72 sequence = ATGTTTTATATCAA Site: position = -213 score = 5.15 sequence = TTGATTCAAATCAA Gene: y1281: Uracil-DNA glycosylase (EC 3.2.2.27) |
Uracil-DNA glycosylase (EC 3.2.2.27) |
| CRON 59. | |||||||||||||
| purM |
Gene: CKO_00291: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) |
*
Edwardsiella tarda EIB202 Site: position = -186 score = 4.68 sequence = ATGATCTCAATCAA Gene: ETAE_1086: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) |
Gene: Ent638_2988: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) |
Gene: EAM_2441: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -198 score = 4.33 sequence = CTGATCCAGATCAA Gene: ECA1254: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -243 score = 4.55 sequence = TTGACTTTAGTCAA Gene: b2499: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) |
Gene: KPN_02824: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -137 score = 5.16 sequence = TTGATTTTCATCAA Gene: plu2760: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) |
*
Proteus mirabilis HI4320 Site: position = -148 score = 5.03 sequence = TTGATATTGATCAA Gene: PMI1575: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) |
*
Salmonella typhimurium LT2 Site: position = -309 score = 4.42 sequence = TTGACCTGGATCAA Gene: STM2499.S: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) |
Gene: Spro_3524: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) |
*
Yersinia pestis KIM Site: position = -312 score = 4.47 sequence = CTGATTCAGATCAA Site: position = -274 score = 3.7 sequence = ATGCTAAAAATCAG Gene: y1407: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) |
Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) |
| purN |
|
Gene: ETAE_1085: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) |
Gene: Ent638_2989: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) |
Gene: EAM_2442: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) |
Gene: ECA1253: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) |
Gene: b2500: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) |
Gene: KPN_02825: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) |
Gene: plu2761: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) |
Gene: PMI1576: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) |
Gene: STM2500: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) |
Gene: Spro_3525: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) |
Gene: y1406: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) |
Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) |
| CRON 60. | |||||||||||||
| nrfA |
*
Citrobacter koseri ATCC BAA-895 Site: position = -146 score = 4.67 sequence = TTGATTAAAGACAA Gene: CKO_03814: Nitrite reductase, cytochrome c(552) |
Gene: ETAE_2795: Nitrite reductase, cytochrome c(552) |
|
|
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -135 score = 4.84 sequence = TTGATCAAAAACAA Gene: ECA1875: Nitrite reductase, cytochrome c(552) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -141 score = 4.67 sequence = TTGATTAAAGACAA Gene: b4070: Nitrite reductase, cytochrome c(552) |
|
|
|
*
Salmonella typhimurium LT2 Site: position = -143 score = 4.67 sequence = TTGATTAAAGACAA Gene: STM4277: Nitrite reductase, cytochrome c(552) |
|
|
Nitrite reductase, cytochrome c(552) |
| nrfB |
Gene: CKO_03812: Cytochrome c-type protein NrfB precursor |
Gene: ETAE_2794: Cytochrome c-type protein NrfB precursor |
|
|
Gene: ECA1876: Cytochrome c-type protein NrfB precursor |
Gene: b4071: Cytochrome c-type protein NrfB precursor |
|
|
|
Gene: STM4278.S: Cytochrome c-type protein NrfB precursor |
|
|
Cytochrome c-type protein NrfB precursor |
| nrfC |
Gene: CKO_03811: Nitrite reductase, Fe-S center subunit |
Gene: ETAE_2793: Nitrite reductase, Fe-S center subunit |
|
|
Gene: ECA1877: Nitrite reductase, Fe-S center subunit |
Gene: b4072: Nitrite reductase, Fe-S center subunit |
|
|
|
Gene: STM4279: Nitrite reductase, Fe-S center subunit |
|
|
Nitrite reductase, Fe-S center subunit |
| nrfD |
Gene: CKO_03810: Nitrite reductase, NrfD component |
Gene: ETAE_2792: Nitrite reductase, NrfD component |
|
|
Gene: ECA1878: Nitrite reductase, NrfD component |
Gene: b4073: Nitrite reductase, NrfD component |
|
|
|
Gene: STM4280: Nitrite reductase, NrfD component |
|
|
Nitrite reductase, NrfD component |
| nrfE |
Gene: CKO_03809: Nitrite reductase, cytochrome c-type heme lyase subunit nrfE |
Gene: ETAE_2791: Nitrite reductase, cytochrome c-type heme lyase subunit nrfE |
|
|
Gene: ECA1879: Nitrite reductase, cytochrome c-type heme lyase subunit nrfE |
Gene: b4074: Nitrite reductase, cytochrome c-type heme lyase subunit nrfE |
|
|
|
Gene: STM4281: Nitrite reductase, cytochrome c-type heme lyase subunit nrfE |
|
|
Nitrite reductase, cytochrome c-type heme lyase subunit nrfE |
| nrfF |
Gene: CKO_03808: Nitrite reductase, cytochrome c-type heme lyase subunit nrfF |
Gene: ETAE_2790: Nitrite reductase, cytochrome c-type heme lyase subunit nrfF |
|
|
Gene: ECA1880: Nitrite reductase, cytochrome c-type heme lyase subunit nrfF |
Gene: b4075: Nitrite reductase, cytochrome c-type heme lyase subunit nrfF |
|
|
|
|
|
|
Nitrite reductase, cytochrome c-type heme lyase subunit nrfF |
| nrfG |
Gene: CKO_03807: Nitrite reductase, cytochrome c-type heme lyase subunit nrfG |
Gene: ETAE_2789: Nitrite reductase, cytochrome c-type heme lyase subunit nrfG |
|
|
Gene: ECA1881: Nitrite reductase, cytochrome c-type heme lyase subunit nrfG |
Gene: b4076: Nitrite reductase, cytochrome c-type heme lyase subunit nrfG |
|
|
|
Gene: STM4282: Nitrite reductase, cytochrome c-type heme lyase subunit nrfG |
|
|
Nitrite reductase, cytochrome c-type heme lyase subunit nrfG |
| CRON 61. | |||||||||||||
| nuoA |
*
Citrobacter koseri ATCC BAA-895 Site: position = -198 score = 3.98 sequence = TCGATGTAAATTAA Gene: CKO_00508: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
*
Edwardsiella tarda EIB202 Site: position = -292 score = 3.65 sequence = TTGATGTAAACGAA Gene: ETAE_2385: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
Gene: Ent638_2832: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
Gene: EAM_2292: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
Gene: ECA3028: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -433 score = 3.67 sequence = ATGATGTTAAAAAA Gene: b2288: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -392 score = 3.61 sequence = TTGATTTACGACGG Gene: KPN_02678: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -207 score = 3.75 sequence = TTGTTATTTGTAAA Gene: plu3089: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
Gene: PMI1762: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
*
Salmonella typhimurium LT2 Site: position = -199 score = 4.59 sequence = TTGATGTAAATTAA Gene: STM2328: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
*
Serratia proteamaculans 568 Site: position = -280 score = 3.77 sequence = TTTCTACACATCAA Gene: Spro_3308: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
*
Yersinia pestis KIM Site: position = -465 score = 3.62 sequence = TTTTATTAAAACAA Gene: y1630: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
| nuoB |
Gene: CKO_00509: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: ETAE_2384: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: Ent638_2831: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: EAM_2291: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: ECA3027: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: b2287: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: KPN_02677: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: plu3088: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: PMI1761: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: STM2327: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: Spro_3307: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: y1631: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
| nuoD |
Gene: CKO_00510: NADH-ubiquinone oxidoreductase chains C and D (EC 1.6.5.3) |
Gene: ETAE_2383: NADH-ubiquinone oxidoreductase chains C and D (EC 1.6.5.3) |
Gene: Ent638_2830: NADH-ubiquinone oxidoreductase chains C and D (EC 1.6.5.3) |
Gene: EAM_2290: NADH-ubiquinone oxidoreductase chains C and D (EC 1.6.5.3) |
Gene: ECA3026: NADH-ubiquinone oxidoreductase chains C and D (EC 1.6.5.3) |
Gene: b2286: NADH-ubiquinone oxidoreductase chains C and D (EC 1.6.5.3) |
Gene: KPN_02676: NADH-ubiquinone oxidoreductase chains C and D (EC 1.6.5.3) |
Gene: plu3087: NADH-ubiquinone oxidoreductase chains C and D (EC 1.6.5.3) |
Gene: PMI1760: NADH-ubiquinone oxidoreductase chains C and D (EC 1.6.5.3) |
Gene: STM2326: NADH-ubiquinone oxidoreductase chains C and D (EC 1.6.5.3) |
Gene: Spro_3306: NADH-ubiquinone oxidoreductase chains C and D (EC 1.6.5.3) |
Gene: y1632: NADH-ubiquinone oxidoreductase chains C and D (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chains C and D (EC 1.6.5.3) |
| nuoE |
Gene: CKO_00511: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: ETAE_2382: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: Ent638_2829: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: EAM_2289: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: ECA3025: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: b2285: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: KPN_02675: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: plu3086: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: PMI1759: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: STM2325: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: Spro_3305: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: y1633: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
| nuoF |
Gene: CKO_00512: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: ETAE_2381: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: Ent638_2828: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: EAM_2288: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: ECA3024: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: b2284: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: KPN_02674: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: plu3085: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: PMI1758: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: STM2324: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: Spro_3304: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: y1634: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
| nuoG |
Gene: CKO_00513: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: ETAE_2380: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: Ent638_2827: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: EAM_2287: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: ECA3023: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: b2283: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: KPN_02673: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: plu3084: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: PMI1757: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: STM2323.S: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: Spro_3303: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: y1635: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
| nuoH |
Gene: CKO_00514: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: ETAE_2379: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: Ent638_2826: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: EAM_2286: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: ECA3022: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: b2282: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: KPN_02672: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: plu3083: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: PMI1756: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: STM2322: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: Spro_3302: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: y1636: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
| nuoI |
Gene: CKO_00515: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: ETAE_2378: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: Ent638_2825: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: EAM_2285: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: ECA3021: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: b2281: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: KPN_02671: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: plu3082: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: PMI1755: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: STM2321: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: Spro_3301: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: y1637: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
| nuoJ |
Gene: CKO_00516: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: ETAE_2377: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: Ent638_2824: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: EAM_2284: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: ECA3020: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: b2280: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: KPN_02670: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: plu3081: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: PMI1754: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: STM2320: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: Spro_3300: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: y1638: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
| nuoK |
Gene: CKO_00517: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: ETAE_2376: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: Ent638_2823: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: EAM_2283: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: ECA3019: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: b2279: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: KPN_02669: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: plu3080: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: PMI1753: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: STM2319: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: Spro_3299: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: y1639: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
| nuoL |
Gene: CKO_00518: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: ETAE_2375: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: Ent638_2822: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: EAM_2282: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: ECA3018: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: b2278: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: KPN_02668: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: plu3079: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: PMI1752: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: STM2318: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: Spro_3298: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: y1640: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
| nuoM |
Gene: CKO_00519: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: ETAE_2374: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: Ent638_2821: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: EAM_2281: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: ECA3017: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: b2277: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: KPN_02667: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: plu3078: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: PMI1751: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: STM2317: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: Spro_3297: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: y1641: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
| nuoN |
Gene: CKO_00520: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: ETAE_2373: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: Ent638_2820: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: EAM_2280: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: ECA3016: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: b2276: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: KPN_02666: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: plu3077: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: PMI1750: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: STM2316.S: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: Spro_3296: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: y1642: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
| CRON 62. | |||||||||||||
| norV |
*
Citrobacter koseri ATCC BAA-895 Site: position = -90 score = 4.23 sequence = TTATTTAAAATCAA Gene: CKO_04064: Anaerobic nitric oxide reductase flavorubredoxin |
|
*
Enterobacter sp. 638 Site: position = -147 score = 4.09 sequence = TTGACAGTAAACAA Gene: Ent638_3182: Anaerobic nitric oxide reductase flavorubredoxin |
|
Gene: ECA0902: Anaerobic nitric oxide reductase flavorubredoxin |
Gene: b2710: Anaerobic nitric oxide reductase flavorubredoxin |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -53 score = 3.72 sequence = TTGATATAAGCCAG Gene: KPN_03045: Anaerobic nitric oxide reductase flavorubredoxin |
|
|
*
Salmonella typhimurium LT2 Site: position = -89 score = 3.72 sequence = TCAATACAAATCAA Gene: STM2840: Anaerobic nitric oxide reductase flavorubredoxin |
Gene: Spro_3033: Anaerobic nitric oxide reductase flavorubredoxin |
|
Anaerobic nitric oxide reductase flavorubredoxin |
| norW |
Gene: CKO_04065: Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-) |
|
Gene: Ent638_3183: Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-) |
|
Gene: ECA0901: Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-) |
Gene: b2711: Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-) |
Gene: KPN_03046: Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-) |
|
|
Gene: STM2841: Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-) |
Gene: Spro_3034: Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-) |
|
Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-) |
| CRON 63. | |||||||||||||
| ackA |
*
Citrobacter koseri ATCC BAA-895 Site: position = -92 score = 4.14 sequence = ATGATGTTAATCAT Gene: CKO_00498: Acetate kinase (EC 2.7.2.1) |
*
Edwardsiella tarda EIB202 Site: position = -93 score = 4.14 sequence = ATGATGTTAATCAT Gene: ETAE_2397: Acetate kinase (EC 2.7.2.1) |
*
Enterobacter sp. 638 Site: position = -92 score = 4.14 sequence = ATGATGTTAATCAT Gene: Ent638_2840: Acetate kinase (EC 2.7.2.1) |
*
Erwinia amylovora ATCC 49946 Site: position = -119 score = 3.93 sequence = TTGCTTTCGGACAA Gene: EAM_2301: Acetate kinase (EC 2.7.2.1) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -91 score = 4.14 sequence = ATGATGTTAATCAT Gene: ECA3039: Acetate kinase (EC 2.7.2.1) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -92 score = 4.14 sequence = ATGATGTTAATCAT Gene: b2296: Acetate kinase (EC 2.7.2.1) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -91 score = 4.14 sequence = ATGATGTTAATCAT Gene: KPN_02687: Acetate kinase (EC 2.7.2.1) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -117 score = 4.14 sequence = ATGATGTTAATCAT Gene: plu3095: Acetate kinase (EC 2.7.2.1) |
*
Proteus mirabilis HI4320 Site: position = -165 score = 3.67 sequence = TTGATGATTGGCAA Gene: PMI1771: Acetate kinase (EC 2.7.2.1) |
*
Salmonella typhimurium LT2 Site: position = -92 score = 4.14 sequence = ATGATGTTAATCAT Gene: STM2337: Acetate kinase (EC 2.7.2.1) |
*
Serratia proteamaculans 568 Site: position = -121 score = 4.14 sequence = ATGATGTTAATCAT Gene: Spro_3316: Acetate kinase (EC 2.7.2.1) |
*
Yersinia pestis KIM Site: position = -163 score = 4.14 sequence = ATGATGTTAATCAT Gene: y1622: Acetate kinase (EC 2.7.2.1) |
Acetate kinase (EC 2.7.2.1) |
| CRON 64. | |||||||||||||
| nrdD |
*
Citrobacter koseri ATCC BAA-895 Site: position = -235 score = 4.24 sequence = TTGATGCAAATCAC Gene: CKO_03580: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
*
Edwardsiella tarda EIB202 Site: position = -196 score = 4.69 sequence = TTGATTCAGGTCAA Gene: ETAE_0423: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
*
Enterobacter sp. 638 Site: position = -244 score = 4.65 sequence = TTGTTCTGAATCAA Site: position = -213 score = 4.24 sequence = TTGATGCAAATCAC Gene: Ent638_0437: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
*
Erwinia amylovora ATCC 49946 Site: position = -106 score = 4.16 sequence = TTGCTTCAGGTCAA Gene: EAM_3059: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -182 score = 4.77 sequence = TTGCTCTACATCAA Gene: ECA0375: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -249 score = 4.78 sequence = TTGAGCTACATCAA Gene: b4238: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -248 score = 4.19 sequence = TTGTTCTGGGTCAA Site: position = -217 score = 4.24 sequence = TTGATGCAAATCAC Gene: KPN_04646: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -160 score = 4.66 sequence = TTGTTTCAGATCAA Gene: plu4499: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
*
Proteus mirabilis HI4320 Site: position = -184 score = 4.86 sequence = TTGATTTAGATCAG Gene: PMI3451: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
*
Salmonella typhimurium LT2 Site: position = -249 score = 4.96 sequence = TTGTTCTACATCAA Site: position = -218 score = 4.24 sequence = TTGATGCAAATCAC Gene: STM4452: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
*
Serratia proteamaculans 568 Site: position = -217 score = 4.65 sequence = TTGTTCTACGTCAA Gene: Spro_0525: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
*
Yersinia pestis KIM Site: position = -192 score = 4.62 sequence = TTGTTCTAGGTCAA Gene: y0733: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
| CKO_03581 |
Gene: CKO_03581: hypothetical protein |
|
|
|
|
|
|
|
|
|
|
|
hypothetical protein |
| nrdG |
Gene: CKO_03582: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Gene: ETAE_0422: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Gene: Ent638_0436: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Gene: EAM_3060: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Gene: ECA0374: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Gene: b4237: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Gene: KPN_04645: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Gene: plu4500: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Gene: PMI3450: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Gene: STM4451: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Gene: Spro_0524: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Gene: y0732: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
| CRON 65. | |||||||||||||
| dcuC |
*
Citrobacter koseri ATCC BAA-895 Site: position = -106 score = 4.73 sequence = TTGATTTTAATCAG Gene: CKO_02537: C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) |
*
Edwardsiella tarda EIB202 Site: position = -147 score = 4.09 sequence = TTGACCAATATCAG Gene: ETAE_1192: C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) |
*
Enterobacter sp. 638 Site: position = -102 score = 4.44 sequence = TTGATTTTAGTCAT Gene: Ent638_1152: C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) |
|
Gene: ECA1414: C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -103 score = 4.73 sequence = TTGATTTTAATCAG Gene: b0621: C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -104 score = 4.46 sequence = TTGATTTGCATCAG Gene: KPN_00654: C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) |
|
*
Proteus mirabilis HI4320 Site: position = -127 score = 4.53 sequence = TTGATATATGTCAT Gene: PMI0652: C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) |
*
Salmonella typhimurium LT2 Site: position = -138 score = 3.62 sequence = TTCATCTTTAGCAA Site: position = -101 score = 4.07 sequence = GTGATTTTAATCAG Gene: STM0627: C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) |
*
Serratia proteamaculans 568 Site: position = -107 score = 3.96 sequence = TTGACGGATATCAT Gene: Spro_1579: C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) |
|
C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) |
| CRON 66. | |||||||||||||
| aspA |
Gene: CKO_03696: Aspartate ammonia-lyase (EC 4.3.1.1) |
*
Edwardsiella tarda EIB202 Site: position = 19 score = 3.45 sequence = TTGAAGAAGATCTA Gene: ETAE_0311: Aspartate ammonia-lyase (EC 4.3.1.1) |
*
Enterobacter sp. 638 Site: position = -184 score = 3.57 sequence = TTAATAATTATCAT Gene: Ent638_0326: Aspartate ammonia-lyase (EC 4.3.1.1) |
*
Erwinia amylovora ATCC 49946 Site: position = -194 score = 3.97 sequence = TTGATATAACACGA Gene: EAM_0416: Aspartate ammonia-lyase (EC 4.3.1.1) |
*2
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -288 score = 4.0 sequence = TTGTTCTAAAATAA Gene: ECA0621: Aspartate ammonia-lyase (EC 4.3.1.1) Gene: ECA0426: Aspartate ammonia-lyase (EC 4.3.1.1) |
Gene: b4139: Aspartate ammonia-lyase (EC 4.3.1.1) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = 0 score = 3.48 sequence = ATGTTAAACAACAT Gene: KPN_04529: Aspartate ammonia-lyase (EC 4.3.1.1) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -362 score = 4.15 sequence = TTGATTTGGATGAA Site: position = -198 score = 3.85 sequence = ATCACATATATCAA Gene: plu4137: Aspartate ammonia-lyase (EC 4.3.1.1) |
*
Proteus mirabilis HI4320 Site: position = -202 score = 3.67 sequence = ATGAGATAGATCAC Gene: PMI2546: Aspartate ammonia-lyase (EC 4.3.1.1) |
Gene: STM4326: Aspartate ammonia-lyase (EC 4.3.1.1) |
Gene: Spro_0406: Aspartate ammonia-lyase (EC 4.3.1.1) |
Gene: y0606: Aspartate ammonia-lyase (EC 4.3.1.1) |
Aspartate ammonia-lyase (EC 4.3.1.1) |
| dcuA |
*
Citrobacter koseri ATCC BAA-895 Site: position = -25 score = 4.42 sequence = TTGTTAAACAACAA Gene: CKO_03697: C4-dicarboxylate transporter DcuA |
Gene: ETAE_0310: C4-dicarboxylate transporter DcuA |
*
Enterobacter sp. 638 Site: position = -25 score = 3.83 sequence = TTGTTAATAAGCAA Gene: Ent638_0325: C4-dicarboxylate transporter DcuA |
Gene: EAM_0415: C4-dicarboxylate transporter DcuA |
Gene: ECA0620: C4-dicarboxylate transporter DcuA |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -25 score = 4.54 sequence = TTGTTAAAAAACAA Gene: b4138: C4-dicarboxylate transporter DcuA |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -25 score = 4.54 sequence = TTGTTAAAAAACAA Gene: KPN_04528: C4-dicarboxylate transporter DcuA |
Gene: plu4138: C4-dicarboxylate transporter DcuA |
Gene: PMI2547: C4-dicarboxylate transporter DcuA |
*
Salmonella typhimurium LT2 Site: position = -25 score = 4.42 sequence = TTGTTAAACAACAA Gene: STM4325: C4-dicarboxylate transporter DcuA |
Gene: Spro_0405: C4-dicarboxylate transporter DcuA |
Gene: y0605: C4-dicarboxylate transporter DcuA |
C4-dicarboxylate transporter DcuA |
| CRON 67. | |||||||||||||
| yhjA |
*
Citrobacter koseri ATCC BAA-895 Site: position = -73 score = 4.68 sequence = TTGATACTTATCAA Gene: CKO_04957: Cytochrome c551 peroxidase (EC 1.11.1.5) |
*
Edwardsiella tarda EIB202 Site: position = -117 score = 4.26 sequence = TTGACACTTATCAA Gene: ETAE_1715: Cytochrome c551 peroxidase (EC 1.11.1.5) |
|
|
|
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -121 score = 4.73 sequence = TTGATTCCTATCAA Gene: b3518: Cytochrome c551 peroxidase (EC 1.11.1.5) |
|
|
|
*
Salmonella typhimurium LT2 Site: position = -110 score = 4.72 sequence = TTGATACCAATCAA Gene: STM3820: Cytochrome c551 peroxidase (EC 1.11.1.5) |
*
Serratia proteamaculans 568 Site: position = -89 score = 4.58 sequence = TTGATTATCGTCAA Gene: Spro_1968: Cytochrome c551 peroxidase (EC 1.11.1.5) |
*
Yersinia pestis KIM Site: position = -152 score = 4.73 sequence = TTGATAAAGGTCAA Gene: y0848: Cytochrome c551 peroxidase (EC 1.11.1.5) |
Cytochrome c551 peroxidase (EC 1.11.1.5) |
| CRON 68. | |||||||||||||
| glpA |
*
Citrobacter koseri ATCC BAA-895 Site: position = -30 score = 3.81 sequence = ATGATAAAAAACGA Gene: CKO_00536: Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3) |
*
Edwardsiella tarda EIB202 Site: position = -78 score = 4.11 sequence = TTGCTCCTTATCAA Gene: ETAE_3115: Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3) |
*
Enterobacter sp. 638 Site: position = -69 score = 4.31 sequence = ATGTTCGAAATCAA Gene: Ent638_2805: Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3) |
|
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -84 score = 4.52 sequence = TTGCTCTTTATCAA Gene: ECA4165: Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -71 score = 3.6 sequence = ATGCGCGAAATCAA Gene: b2241: Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -71 score = 4.12 sequence = ATGCTCGAAATCAA Gene: KPN_02647: Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3) |
|
*
Proteus mirabilis HI4320 Site: position = -107 score = 4.25 sequence = TTGCTCATTATCAA Gene: PMI3592: Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3) |
*
Salmonella typhimurium LT2 Site: position = -30 score = 3.81 sequence = ATGATAAAAAACGA Gene: STM2284: Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3) |
*
Serratia proteamaculans 568 Site: position = -74 score = 4.3 sequence = TTGTTCCTTATCAA Gene: Spro_0200: Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3) |
*
Yersinia pestis KIM Site: position = -91 score = 4.44 sequence = TTGTTTCTTATCAA Site: position = -145 score = 4.29 sequence = TTGATCACAATCAT Gene: y0404: Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3) |
Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3) |
| glpB |
Gene: CKO_00535: Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC 1.1.5.3) |
Gene: ETAE_3114: Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC 1.1.5.3) |
Gene: Ent638_2806: Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC 1.1.5.3) |
|
Gene: ECA4164: Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC 1.1.5.3) |
Gene: b2242: Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC 1.1.5.3) |
Gene: KPN_02648: Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC 1.1.5.3) |
|
Gene: PMI3593: Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC 1.1.5.3) |
Gene: STM2285: Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC 1.1.5.3) |
Gene: Spro_0201: Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC 1.1.5.3) |
Gene: y0405: Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC 1.1.5.3) |
Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC 1.1.5.3) |
| glpC |
Gene: CKO_00534: Anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3) |
Gene: ETAE_3113: Anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3) |
Gene: Ent638_2807: Anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3) |
|
Gene: ECA4163: Anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3) |
Gene: b2243: Anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3) |
Gene: KPN_02649: Anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3) |
|
Gene: PMI3594: Anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3) |
Gene: STM2286: Anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3) |
Gene: Spro_0202: Anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3) |
Gene: y0406: Anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3) |
Anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3) |
| CRON 69. | |||||||||||||
| ybiY |
*
Citrobacter koseri ATCC BAA-895 Site: position = -70 score = 4.14 sequence = TTGACCTGCGTCAA Gene: CKO_02286: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
*
Edwardsiella tarda EIB202 Site: position = -71 score = 5.15 sequence = TTGATCAAAATCAA Gene: ETAE_0451: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
*
Enterobacter sp. 638 Site: position = -68 score = 4.41 sequence = TTGACGCACATCAA Gene: Ent638_1318: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
|
|
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -67 score = 4.41 sequence = TTGACGCACATCAA Gene: b0824: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -69 score = 4.7 sequence = TTGATTTGCGTCAA Gene: KPN_00858: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
|
|
*
Salmonella typhimurium LT2 Site: position = -69 score = 4.41 sequence = TTGACGCACATCAA Gene: STM0844: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
*
Serratia proteamaculans 568 Site: position = -76 score = 5.06 sequence = TTGATCGAAATCAA Gene: Spro_2641: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
|
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
| ybiW |
Gene: CKO_02287: Pyruvate formate-lyase (EC 2.3.1.54) |
Gene: ETAE_0450: Pyruvate formate-lyase (EC 2.3.1.54) |
Gene: Ent638_1317: Pyruvate formate-lyase (EC 2.3.1.54) |
|
|
Gene: b0823: Pyruvate formate-lyase (EC 2.3.1.54) |
Gene: KPN_00857: Pyruvate formate-lyase (EC 2.3.1.54) |
|
|
Gene: STM0843: Pyruvate formate-lyase (EC 2.3.1.54) |
Gene: Spro_2642: Pyruvate formate-lyase (EC 2.3.1.54) |
|
Pyruvate formate-lyase (EC 2.3.1.54) |
| CRON 70. | |||||||||||||
| glpT |
*
Citrobacter koseri ATCC BAA-895 Site: position = -257 score = 3.71 sequence = TCGTTTTTTATCAT Gene: CKO_00537: Glycerol-3-phosphate transporter |
*
Edwardsiella tarda EIB202 Site: position = -301 score = 3.78 sequence = GTGATCAAAATCAC Gene: ETAE_3116: Glycerol-3-phosphate transporter |
*
Enterobacter sp. 638 Site: position = -197 score = 4.24 sequence = TTGATTTCGAACAT Gene: Ent638_2804: Glycerol-3-phosphate transporter |
Gene: EAM_0195: Glycerol-3-phosphate transporter |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -249 score = 4.3 sequence = TTGATAAAGAGCAA Gene: ECA4166: Glycerol-3-phosphate transporter |
Gene: b2240: Glycerol-3-phosphate transporter |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -214 score = 3.81 sequence = TTGATTTCGAGCAT Gene: KPN_02646: Glycerol-3-phosphate transporter |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -306 score = 4.18 sequence = TTGATAAAGAACAG Gene: plu4119: Glycerol-3-phosphate transporter |
*
Proteus mirabilis HI4320 Site: position = -45 score = 4.86 sequence = TTGTTTAATATCAA Site: position = -287 score = 4.02 sequence = TTGATAATGAGCAA Gene: PMI3591: Glycerol-3-phosphate transporter |
*
Salmonella typhimurium LT2 Site: position = -256 score = 3.71 sequence = TCGTTTTTTATCAT Gene: STM2283: Glycerol-3-phosphate transporter |
*
Serratia proteamaculans 568 Site: position = -305 score = 4.3 sequence = TTGATAAGGAACAA Gene: Spro_0199: Glycerol-3-phosphate transporter |
|
Glycerol-3-phosphate transporter |
| glpQ |
Gene: CKO_00538: Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) |
Gene: ETAE_3117: Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) |
|
|
Gene: ECA4167: Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) |
Gene: b2239: Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) |
Gene: KPN_02645: Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) |
Gene: plu4120: Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) |
Gene: PMI3590: Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) |
Gene: STM2282: Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) |
Gene: Spro_0198: Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) |
Gene: y0403: Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) |
Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) |
| CRON 71. | |||||||||||||
| ycgM |
Gene: CKO_03358: Fumarylacetoacetate hydrolase family protein |
|
*
Enterobacter sp. 638 Site: position = 19 score = 4.1 sequence = TTTATAAAGGTCAA Gene: Ent638_3376: Fumarylacetoacetate hydrolase family protein |
|
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -93 score = 3.8 sequence = TTGAGCCAAATAAA Gene: ECA2575: Fumarylacetoacetate hydrolase family protein |
|
|
|
|
|
|
|
Fumarylacetoacetate hydrolase family protein |
| citC |
*
Citrobacter koseri ATCC BAA-895 Site: position = -184 score = 4.14 sequence = GTGAAATAAATCAA Gene: CKO_02541: [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) |
Gene: ETAE_0227: [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) |
Gene: Ent638_3375: [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) |
|
Gene: ECA2574: [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -179 score = 4.14 sequence = GTGAAATAAATCAA Gene: b0618: [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -125 score = 3.61 sequence = TTAATTAACAACAT Gene: KPN_00034: [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) |
|
|
*2
Salmonella typhimurium LT2 Site: position = -227 score = 4.17 sequence = TTGATGGGTAACAA Gene: STM0058: [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) Site: position = -182 score = 4.14 sequence = GTGAAATAAATCAA Gene: STM0624: [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) |
Gene: Spro_3171: [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) |
|
[Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) |
| citD |
Gene: CKO_02542: Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) |
Gene: ETAE_0226: Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) |
Gene: Ent638_3374: Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) |
|
Gene: ECA2573: Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) |
Gene: b0617: Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) |
Gene: KPN_00035: Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) |
|
|
2
Salmonella typhimurium LT2 Gene: STM0059: Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) Gene: STM0623: Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) |
Gene: Spro_3170: Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) |
|
Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) |
| citE |
Gene: CKO_02543: Citrate lyase beta chain (EC 4.1.3.6) |
Gene: ETAE_0225: Citrate lyase beta chain (EC 4.1.3.6) |
Gene: Ent638_3373: Citrate lyase beta chain (EC 4.1.3.6) |
|
Gene: ECA2572: Citrate lyase beta chain (EC 4.1.3.6) |
Gene: b0616: Citrate lyase beta chain (EC 4.1.3.6) |
Gene: KPN_00036: Citrate lyase beta chain (EC 4.1.3.6) |
|
|
2
Salmonella typhimurium LT2 Gene: STM0060: Citrate lyase beta chain (EC 4.1.3.6) Gene: STM0622: Citrate lyase beta chain (EC 4.1.3.6) |
Gene: Spro_3169: Citrate lyase beta chain (EC 4.1.3.6) |
|
Citrate lyase beta chain (EC 4.1.3.6) |
| citF |
Gene: CKO_02544: Citrate lyase alpha chain (EC 4.1.3.6) |
Gene: ETAE_0224: Citrate lyase alpha chain (EC 4.1.3.6) |
Gene: Ent638_3372: Citrate lyase alpha chain (EC 4.1.3.6) |
|
Gene: ECA2571: Citrate lyase alpha chain (EC 4.1.3.6) |
Gene: b0615: Citrate lyase alpha chain (EC 4.1.3.6) |
Gene: KPN_00037: Citrate lyase alpha chain (EC 4.1.3.6) |
|
|
2
Salmonella typhimurium LT2 Gene: STM0061: Citrate lyase alpha chain (EC 4.1.3.6) Gene: STM0621: Citrate lyase alpha chain (EC 4.1.3.6) |
Gene: Spro_3168: Citrate lyase alpha chain (EC 4.1.3.6) |
|
Citrate lyase alpha chain (EC 4.1.3.6) |
| citX |
Gene: CKO_02545: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61) |
Gene: ETAE_0223: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61) |
Gene: Ent638_3371: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61) |
|
Gene: ECA2570: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61) |
Gene: b0614: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61) |
Gene: KPN_00056: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61) |
|
|
2
Salmonella typhimurium LT2 Gene: STM0062: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61) Gene: STM0620: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61) |
Gene: Spro_3167: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61) |
|
Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61) |
| citG |
Gene: CKO_02546: 2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase (EC 2.7.8.25) |
Gene: ETAE_0222: 2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase (EC 2.7.8.25) |
Gene: Ent638_3370: 2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase (EC 2.7.8.25) |
|
Gene: ECA2569: 2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase (EC 2.7.8.25) |
Gene: b0613: 2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase (EC 2.7.8.25) |
Gene: KPN_00038: 2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase (EC 2.7.8.25) |
|
|
2
Salmonella typhimurium LT2 Gene: STM0063: 2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase (EC 2.7.8.25) Gene: STM0619: 2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase (EC 2.7.8.25) |
Gene: Spro_3166: 2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase (EC 2.7.8.25) |
|
2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase (EC 2.7.8.25) |
| CRON 72. | |||||||||||||
| ybhK |
Gene: CKO_02346: Predicted transferase, NAD(P)-binding |
*
Edwardsiella tarda EIB202 Site: position = -92 score = 3.94 sequence = TTGATACATGTCAC Gene: ETAE_2348: Predicted transferase, NAD(P)-binding |
*
Enterobacter sp. 638 Site: position = -90 score = 4.5 sequence = TTGATATACGTCAT Gene: Ent638_1272: Predicted transferase, NAD(P)-binding |
*
Erwinia amylovora ATCC 49946 Site: position = -88 score = 3.97 sequence = TTGATATATAGCGA Gene: EAM_1217: Predicted transferase, NAD(P)-binding |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -117 score = 3.69 sequence = ATGAGCTTACTCAA Gene: ECA2818: Predicted transferase, NAD(P)-binding |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -147 score = 4.81 sequence = TTGATATACATCAT Gene: b0780: Predicted transferase, NAD(P)-binding |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -91 score = 4.02 sequence = TTGATGTCGGTCAG Gene: KPN_00809: Predicted transferase, NAD(P)-binding |
Gene: plu1498: Predicted transferase, NAD(P)-binding |
Gene: PMI0609: Predicted transferase, NAD(P)-binding |
*
Salmonella typhimurium LT2 Site: position = -146 score = 4.84 sequence = TTGATATATATCAT Gene: STM0801: Predicted transferase, NAD(P)-binding |
Gene: Spro_1319: Predicted transferase, NAD(P)-binding |
*
Yersinia pestis KIM Site: position = -190 score = 4.24 sequence = TTGTTTAAAATCAC Gene: y3024: Predicted transferase, NAD(P)-binding |
Predicted transferase, NAD(P)-binding |
| CRON 73. | |||||||||||||
| focA |
*
Citrobacter koseri ATCC BAA-895 Site: position = -116 score = 4.92 sequence = ATGATCTATATCAA Gene: CKO_02167: Formate efflux transporter (TC 2.A.44 family) |
*
Edwardsiella tarda EIB202 Site: position = -117 score = 4.2 sequence = ATGATCCATGTCAA Gene: ETAE_2181: Formate efflux transporter (TC 2.A.44 family) |
*
Enterobacter sp. 638 Site: position = -74 score = 4.92 sequence = ATGATCTATATCAA Gene: Ent638_1424: Formate efflux transporter (TC 2.A.44 family) |
Gene: EAM_2380: Formate efflux transporter (TC 2.A.44 family) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -228 score = 4.01 sequence = ATGATTTTTATTAA Site: position = -75 score = 4.48 sequence = ATGATCCACATCAA Gene: ECA2596: Formate efflux transporter (TC 2.A.44 family) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -74 score = 4.92 sequence = ATGATCTATATCAA Gene: b0904: Formate efflux transporter (TC 2.A.44 family) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -117 score = 4.92 sequence = ATGATCTATATCAA Gene: KPN_00932: Formate efflux transporter (TC 2.A.44 family) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -267 score = 4.07 sequence = TTTATTTGCAACAA Site: position = -159 score = 4.66 sequence = TTTATTAAAATCAA Site: position = -84 score = 4.92 sequence = ATGATCTATATCAA Gene: plu1614: Formate efflux transporter (TC 2.A.44 family) |
*
Proteus mirabilis HI4320 Site: position = -85 score = 4.51 sequence = ATGATCCATATCAA Site: position = -159 score = 4.12 sequence = TTATTATTAATCAA Gene: PMI0706: Formate efflux transporter (TC 2.A.44 family) |
*
Salmonella typhimurium LT2 Site: position = -74 score = 4.92 sequence = ATGATCTATATCAA Gene: STM0974: Formate efflux transporter (TC 2.A.44 family) |
*
Serratia proteamaculans 568 Site: position = -143 score = 3.91 sequence = ATAATTTAACTCAA Site: position = -81 score = 4.6 sequence = ATGATCCAAATCAA Gene: Spro_1703: Formate efflux transporter (TC 2.A.44 family) |
*
Yersinia pestis KIM Site: position = -80 score = 4.51 sequence = ATGATCCATATCAA Gene: y2789: Formate efflux transporter (TC 2.A.44 family) |
Formate efflux transporter (TC 2.A.44 family) |
| pflB |
Gene: CKO_02168: Pyruvate formate-lyase (EC 2.3.1.54) |
Gene: ETAE_2182: Pyruvate formate-lyase (EC 2.3.1.54) |
Gene: Ent638_1423: Pyruvate formate-lyase (EC 2.3.1.54) |
|
Gene: ECA2597: Pyruvate formate-lyase (EC 2.3.1.54) |
Gene: b0903: Pyruvate formate-lyase (EC 2.3.1.54) |
Gene: KPN_00931: Pyruvate formate-lyase (EC 2.3.1.54) |
Gene: plu1613: Pyruvate formate-lyase (EC 2.3.1.54) |
Gene: PMI0705: Pyruvate formate-lyase (EC 2.3.1.54) |
Gene: STM0973: Pyruvate formate-lyase (EC 2.3.1.54) |
Gene: Spro_1702: Pyruvate formate-lyase (EC 2.3.1.54) |
Gene: y2790: Pyruvate formate-lyase (EC 2.3.1.54) |
Pyruvate formate-lyase (EC 2.3.1.54) |
| CRON 74. | |||||||||||||
| atpI |
*
Citrobacter koseri ATCC BAA-895 Site: position = -122 score = 4.15 sequence = TTGTTTGAAATCAC Gene: CKO_00079: ATP synthase protein I |
Gene: ETAE_3526: ATP synthase protein I |
*
Enterobacter sp. 638 Site: position = -292 score = 3.66 sequence = TTGATTAATATGAC Gene: Ent638_4125: ATP synthase protein I |
*
Erwinia amylovora ATCC 49946 Site: position = -124 score = 3.88 sequence = TCGATTGAAATCAC Gene: EAM_3481: ATP synthase protein I |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -191 score = 3.68 sequence = ATGATTGTTAGCAA Gene: ECA4519: ATP synthase protein I |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -123 score = 4.15 sequence = TTGTTTGAAATCAC Gene: b3739: ATP synthase protein I |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -122 score = 4.15 sequence = TTGTTTGAAATCAC Gene: KPN_04144: ATP synthase protein I |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -225 score = 3.94 sequence = ATTATTAAAAACAA Gene: plu0047: ATP synthase protein I |
*
Proteus mirabilis HI4320 Site: position = -130 score = 3.99 sequence = Gene: PMI3057: ATP synthase protein I |
*
Salmonella typhimurium LT2 Site: position = -122 score = 4.15 sequence = TTGTTTGAAATCAC Gene: STM3872: ATP synthase protein I |
Gene: Spro_0001: ATP synthase protein I |
Gene: y4142: ATP synthase protein I |
ATP synthase protein I |
| atpB |
Gene: CKO_00078: ATP synthase A chain (EC 3.6.3.14) |
Gene: ETAE_3527: ATP synthase A chain (EC 3.6.3.14) |
Gene: Ent638_4126: ATP synthase A chain (EC 3.6.3.14) |
Gene: EAM_3480: ATP synthase A chain (EC 3.6.3.14) |
Gene: ECA4518: ATP synthase A chain (EC 3.6.3.14) |
Gene: b3738: ATP synthase A chain (EC 3.6.3.14) |
Gene: KPN_04143: ATP synthase A chain (EC 3.6.3.14) |
Gene: plu0046: ATP synthase A chain (EC 3.6.3.14) |
Gene: PMI3058: ATP synthase A chain (EC 3.6.3.14) |
Gene: STM3871: ATP synthase A chain (EC 3.6.3.14) |
Gene: Spro_0002: ATP synthase A chain (EC 3.6.3.14) |
Gene: y4141: ATP synthase A chain (EC 3.6.3.14) |
ATP synthase A chain (EC 3.6.3.14) |
| atpE |
Gene: CKO_00077: ATP synthase C chain (EC 3.6.3.14) |
Gene: ETAE_3528: ATP synthase C chain (EC 3.6.3.14) |
Gene: Ent638_4127: ATP synthase C chain (EC 3.6.3.14) |
Gene: EAM_3479: ATP synthase C chain (EC 3.6.3.14) |
Gene: ECA4517: ATP synthase C chain (EC 3.6.3.14) |
Gene: b3737: ATP synthase C chain (EC 3.6.3.14) |
Gene: KPN_04142: ATP synthase C chain (EC 3.6.3.14) |
Gene: plu0045: ATP synthase C chain (EC 3.6.3.14) |
Gene: PMI3059: ATP synthase C chain (EC 3.6.3.14) |
Gene: STM3870: ATP synthase C chain (EC 3.6.3.14) |
Gene: Spro_0003: ATP synthase C chain (EC 3.6.3.14) |
Gene: y4140: ATP synthase C chain (EC 3.6.3.14) |
ATP synthase C chain (EC 3.6.3.14) |
| atpF |
Gene: CKO_00076: ATP synthase B chain (EC 3.6.3.14) |
Gene: ETAE_3529: ATP synthase B chain (EC 3.6.3.14) |
Gene: Ent638_4128: ATP synthase B chain (EC 3.6.3.14) |
Gene: EAM_3478: ATP synthase B chain (EC 3.6.3.14) |
Gene: ECA4516: ATP synthase B chain (EC 3.6.3.14) |
Gene: b3736: ATP synthase B chain (EC 3.6.3.14) |
Gene: KPN_04141: ATP synthase B chain (EC 3.6.3.14) |
Gene: plu0044: ATP synthase B chain (EC 3.6.3.14) |
Gene: PMI3060: ATP synthase B chain (EC 3.6.3.14) |
Gene: STM3869: ATP synthase B chain (EC 3.6.3.14) |
Gene: Spro_0004: ATP synthase B chain (EC 3.6.3.14) |
Gene: y4139: ATP synthase B chain (EC 3.6.3.14) |
ATP synthase B chain (EC 3.6.3.14) |
| atpH |
Gene: CKO_00075: ATP synthase delta chain (EC 3.6.3.14) |
Gene: ETAE_3530: ATP synthase delta chain (EC 3.6.3.14) |
Gene: Ent638_4129: ATP synthase delta chain (EC 3.6.3.14) |
Gene: EAM_3477: ATP synthase delta chain (EC 3.6.3.14) |
Gene: ECA4515: ATP synthase delta chain (EC 3.6.3.14) |
Gene: b3735: ATP synthase delta chain (EC 3.6.3.14) |
Gene: KPN_04140: ATP synthase delta chain (EC 3.6.3.14) |
Gene: plu0043: ATP synthase delta chain (EC 3.6.3.14) |
Gene: PMI3061: ATP synthase delta chain (EC 3.6.3.14) |
Gene: STM3868: ATP synthase delta chain (EC 3.6.3.14) |
Gene: Spro_0005: ATP synthase delta chain (EC 3.6.3.14) |
Gene: y4138: ATP synthase delta chain (EC 3.6.3.14) |
ATP synthase delta chain (EC 3.6.3.14) |
| atpA |
Gene: CKO_00073: ATP synthase alpha chain (EC 3.6.3.14) |
Gene: ETAE_3531: ATP synthase alpha chain (EC 3.6.3.14) |
Gene: Ent638_4130: ATP synthase alpha chain (EC 3.6.3.14) |
Gene: EAM_3476: ATP synthase alpha chain (EC 3.6.3.14) |
Gene: ECA4514: ATP synthase alpha chain (EC 3.6.3.14) |
Gene: b3734: ATP synthase alpha chain (EC 3.6.3.14) |
Gene: KPN_04139: ATP synthase alpha chain (EC 3.6.3.14) |
Gene: plu0042: ATP synthase alpha chain (EC 3.6.3.14) |
Gene: PMI3062: ATP synthase alpha chain (EC 3.6.3.14) |
Gene: STM3867: ATP synthase alpha chain (EC 3.6.3.14) |
Gene: Spro_0006: ATP synthase alpha chain (EC 3.6.3.14) |
Gene: y4137: ATP synthase alpha chain (EC 3.6.3.14) |
ATP synthase alpha chain (EC 3.6.3.14) |
| atpG |
Gene: CKO_00071: ATP synthase gamma chain (EC 3.6.3.14) |
Gene: ETAE_3532: ATP synthase gamma chain (EC 3.6.3.14) |
Gene: Ent638_4131: ATP synthase gamma chain (EC 3.6.3.14) |
Gene: EAM_3475: ATP synthase gamma chain (EC 3.6.3.14) |
Gene: ECA4513: ATP synthase gamma chain (EC 3.6.3.14) |
Gene: b3733: ATP synthase gamma chain (EC 3.6.3.14) |
Gene: KPN_04138: ATP synthase gamma chain (EC 3.6.3.14) |
Gene: plu0041: ATP synthase gamma chain (EC 3.6.3.14) |
Gene: PMI3063: ATP synthase gamma chain (EC 3.6.3.14) |
Gene: STM3866: ATP synthase gamma chain (EC 3.6.3.14) |
Gene: Spro_0007: ATP synthase gamma chain (EC 3.6.3.14) |
Gene: y4136: ATP synthase gamma chain (EC 3.6.3.14) |
ATP synthase gamma chain (EC 3.6.3.14) |
| atpD |
Gene: CKO_00070: ATP synthase beta chain (EC 3.6.3.14) |
Gene: ETAE_3533: ATP synthase beta chain (EC 3.6.3.14) |
Gene: Ent638_4132: ATP synthase beta chain (EC 3.6.3.14) |
Gene: EAM_3474: ATP synthase beta chain (EC 3.6.3.14) |
Gene: ECA4512: ATP synthase beta chain (EC 3.6.3.14) |
Gene: b3732: ATP synthase beta chain (EC 3.6.3.14) |
Gene: KPN_04137: ATP synthase beta chain (EC 3.6.3.14) |
Gene: plu0040: ATP synthase beta chain (EC 3.6.3.14) |
Gene: PMI3064: ATP synthase beta chain (EC 3.6.3.14) |
Gene: STM3865: ATP synthase beta chain (EC 3.6.3.14) |
Gene: Spro_0008: ATP synthase beta chain (EC 3.6.3.14) |
Gene: y4135: ATP synthase beta chain (EC 3.6.3.14) |
ATP synthase beta chain (EC 3.6.3.14) |
| atpC |
Gene: CKO_00069: ATP synthase epsilon chain (EC 3.6.3.14) |
Gene: ETAE_3534: ATP synthase epsilon chain (EC 3.6.3.14) |
Gene: Ent638_4133: ATP synthase epsilon chain (EC 3.6.3.14) |
Gene: EAM_3473: ATP synthase epsilon chain (EC 3.6.3.14) |
Gene: ECA4511: ATP synthase epsilon chain (EC 3.6.3.14) |
Gene: b3731: ATP synthase epsilon chain (EC 3.6.3.14) |
Gene: KPN_04136: ATP synthase epsilon chain (EC 3.6.3.14) |
Gene: plu0039: ATP synthase epsilon chain (EC 3.6.3.14) |
Gene: PMI3065: ATP synthase epsilon chain (EC 3.6.3.14) |
Gene: STM3864: ATP synthase epsilon chain (EC 3.6.3.14) |
Gene: Spro_0009: ATP synthase epsilon chain (EC 3.6.3.14) |
Gene: y4134: ATP synthase epsilon chain (EC 3.6.3.14) |
ATP synthase epsilon chain (EC 3.6.3.14) |
| CRON 75. | |||||||||||||
| ynfE |
*2
Citrobacter koseri ATCC BAA-895 Site: position = -32 score = 4.31 sequence = Gene: CKO_01582: Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) Site: position = -114 score = 3.69 sequence = TTGACATGGATTAA Gene: CKO_01581: Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) |
|
|
|
|
*2
Escherichia coli str. K-12 substr. MG1655 Site: position = -113 score = 4.11 sequence = TTGATATGGATTAA Gene: b1587: Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) Gene: b1588: Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) |
Gene: KPN_01580: Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) |
|
|
*2
Salmonella typhimurium LT2 Site: position = -116 score = 3.69 sequence = TTGACATGGATTAA Gene: STM1499: Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) Gene: STM1498: Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) |
*
Serratia proteamaculans 568 Site: position = -164 score = 4.15 sequence = TTGATAGCAGACAA Site: position = -40 score = 4.16 sequence = ATGACGTTTATCAA Gene: Spro_1687: Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) |
|
Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) |
| ynfG |
Gene: CKO_01583: Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-) |
|
|
|
|
Gene: b1589: Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-) |
Gene: KPN_01579: Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-) |
|
|
Gene: STM1497: Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-) |
Gene: Spro_1688: Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-) |
|
Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-) |
| ynfH |
Gene: CKO_01584: Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-) |
|
|
|
|
Gene: b1590: Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-) |
Gene: KPN_01578: Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-) |
|
|
Gene: STM1496: Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-) |
Gene: Spro_1689: Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-) |
|
Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-) |
| ynfI |
Gene: CKO_01585: Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD |
|
*
Enterobacter sp. 638 Site: position = -107 score = 3.65 sequence = TTGATGGGGATTAA Gene: Ent638_1925: Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD |
|
|
Gene: b1591: Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD |
Gene: KPN_01577: Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD |
|
|
Gene: STM1495: Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD |
Gene: Spro_1690: Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD |
|
Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD |
| CRON 76. | |||||||||||||
| dmsA |
*
Citrobacter koseri ATCC BAA-895 Site: position = -117 score = 3.61 sequence = CTGATTTTTCTCAT Gene: CKO_02177: Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) |
2
Edwardsiella tarda EIB202 Gene: ETAE_2194: Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) Gene: ETAE_2195: Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) |
*
Enterobacter sp. 638 Site: position = -3 score = 3.85 sequence = TCTATGAAAATCAA Gene: Ent638_1418: Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) |
|
|
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -184 score = 4.26 sequence = TTGATACCGAACAA Gene: b0894: Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) |
Gene: KPN_00926: Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) |
|
|
*
Salmonella typhimurium LT2 Site: position = -96 score = 4.21 sequence = Gene: STM0964: Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) |
|
*
Yersinia pestis KIM Site: position = -199 score = 4.2 sequence = TTGATTCCAGACAA Gene: y0864: Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) |
Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) |
| dmsB |
|
Gene: ETAE_2193: Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-) |
Gene: Ent638_1419: Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-) |
|
|
Gene: b0895: Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-) |
Gene: KPN_00927: Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-) |
|
|
Gene: STM0965: Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-) |
|
Gene: y0865: Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-) |
Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-) |
| dmsC |
|
Gene: ETAE_2192: Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-) |
Gene: Ent638_1420: Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-) |
|
|
Gene: b0896: Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-) |
Gene: KPN_00928: Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-) |
|
|
Gene: STM0966: Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-) |
|
Gene: y0866: Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-) |
Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-) |
| CRON 77. | |||||||||||||
| aceB |
*
Citrobacter koseri ATCC BAA-895 Site: position = -162 score = 4.2 sequence = TTTATTGTTATCAA Gene: CKO_03906: Malate synthase (EC 2.3.3.9) |
|
*
Enterobacter sp. 638 Site: position = -111 score = 3.97 sequence = TTGATTTTAGAAAA Gene: Ent638_0218: Malate synthase (EC 2.3.3.9) |
|
Gene: ECA3991: Malate synthase (EC 2.3.3.9) |
Gene: b4014: Malate synthase (EC 2.3.3.9) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -154 score = 4.14 sequence = TTCATTGTTATCAA Gene: KPN_04395: Malate synthase (EC 2.3.3.9) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -61 score = 4.02 sequence = Gene: plu4396: Malate synthase (EC 2.3.3.9) |
*
Proteus mirabilis HI4320 Site: position = -64 score = 4.19 sequence = Gene: PMI2764: Malate synthase (EC 2.3.3.9) |
Gene: STM4183: Malate synthase (EC 2.3.3.9) |
Gene: Spro_4503: Malate synthase (EC 2.3.3.9) |
Gene: y0015: Malate synthase (EC 2.3.3.9) |
Malate synthase (EC 2.3.3.9) |
| aceA |
Gene: CKO_03905: Isocitrate lyase (EC 4.1.3.1) |
|
Gene: Ent638_0219: Isocitrate lyase (EC 4.1.3.1) |
|
Gene: ECA3990: Isocitrate lyase (EC 4.1.3.1) |
Gene: b4015: Isocitrate lyase (EC 4.1.3.1) |
Gene: KPN_04396: Isocitrate lyase (EC 4.1.3.1) |
Gene: plu4395: Isocitrate lyase (EC 4.1.3.1) |
Gene: PMI2763: Isocitrate lyase (EC 4.1.3.1) |
Gene: STM4184: Isocitrate lyase (EC 4.1.3.1) |
Gene: Spro_4502: Isocitrate lyase (EC 4.1.3.1) |
Gene: y0016: Isocitrate lyase (EC 4.1.3.1) |
Isocitrate lyase (EC 4.1.3.1) |
| aceK |
Gene: CKO_03904: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-) |
|
Gene: Ent638_0220: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-) |
|
Gene: ECA3989: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-) |
Gene: b4016: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-) |
Gene: KPN_04397: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-) |
Gene: plu4394: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-) |
Gene: PMI2762: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-) |
Gene: STM4185: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-) |
Gene: Spro_4501: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-) |
Gene: y0018: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-) |
Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-) |
| CRON 78. | |||||||||||||
| hypB |
Gene: CKO_04083: [NiFe] hydrogenase nickel incorporation-associated protein HypB |
Gene: ETAE_2905: [NiFe] hydrogenase nickel incorporation-associated protein HypB |
Gene: Ent638_3200: [NiFe] hydrogenase nickel incorporation-associated protein HypB |
|
Gene: ECA1234: [NiFe] hydrogenase nickel incorporation-associated protein HypB |
Gene: b2727: [NiFe] hydrogenase nickel incorporation-associated protein HypB |
Gene: KPN_03064: [NiFe] hydrogenase nickel incorporation-associated protein HypB |
|
Gene: PMI0037: [NiFe] hydrogenase nickel incorporation-associated protein HypB |
*
Salmonella typhimurium LT2 Site: position = -88 score = 3.74 sequence = TTGATGAAACTGAA Gene: STM2855: [NiFe] hydrogenase nickel incorporation-associated protein HypB |
Gene: Spro_2436: [NiFe] hydrogenase nickel incorporation-associated protein HypB |
|
[NiFe] hydrogenase nickel incorporation-associated protein HypB |
| hypC |
Gene: CKO_04084: [NiFe] hydrogenase metallocenter assembly protein HypC |
Gene: ETAE_2906: [NiFe] hydrogenase metallocenter assembly protein HypC |
Gene: Ent638_3201: [NiFe] hydrogenase metallocenter assembly protein HypC |
|
Gene: ECA1233: [NiFe] hydrogenase metallocenter assembly protein HypC |
Gene: b2728: [NiFe] hydrogenase metallocenter assembly protein HypC |
Gene: KPN_03065: [NiFe] hydrogenase metallocenter assembly protein HypC |
|
Gene: PMI0038: [NiFe] hydrogenase metallocenter assembly protein HypC |
Gene: STM2856: [NiFe] hydrogenase metallocenter assembly protein HypC |
Gene: Spro_2437: [NiFe] hydrogenase metallocenter assembly protein HypC |
|
[NiFe] hydrogenase metallocenter assembly protein HypC |
| hypD |
Gene: CKO_04085: [NiFe] hydrogenase metallocenter assembly protein HypD |
Gene: ETAE_2907: [NiFe] hydrogenase metallocenter assembly protein HypD |
Gene: Ent638_3202: [NiFe] hydrogenase metallocenter assembly protein HypD |
|
Gene: ECA1232: [NiFe] hydrogenase metallocenter assembly protein HypD |
Gene: b2729: [NiFe] hydrogenase metallocenter assembly protein HypD |
Gene: KPN_03066: [NiFe] hydrogenase metallocenter assembly protein HypD |
|
Gene: PMI0039: [NiFe] hydrogenase metallocenter assembly protein HypD |
Gene: STM2857: [NiFe] hydrogenase metallocenter assembly protein HypD |
Gene: Spro_2438: [NiFe] hydrogenase metallocenter assembly protein HypD |
|
[NiFe] hydrogenase metallocenter assembly protein HypD |
| hypE |
Gene: CKO_04086: [NiFe] hydrogenase metallocenter assembly protein HypE |
Gene: ETAE_2908: [NiFe] hydrogenase metallocenter assembly protein HypE |
Gene: Ent638_3203: [NiFe] hydrogenase metallocenter assembly protein HypE |
|
Gene: ECA1231: [NiFe] hydrogenase metallocenter assembly protein HypE |
Gene: b2730: [NiFe] hydrogenase metallocenter assembly protein HypE |
Gene: KPN_03067: [NiFe] hydrogenase metallocenter assembly protein HypE |
|
Gene: PMI0040: [NiFe] hydrogenase metallocenter assembly protein HypE |
Gene: STM2858: [NiFe] hydrogenase metallocenter assembly protein HypE |
Gene: Spro_2439: [NiFe] hydrogenase metallocenter assembly protein HypE |
|
[NiFe] hydrogenase metallocenter assembly protein HypE |
| CRON 79. | |||||||||||||
| yfgF |
*
Citrobacter koseri ATCC BAA-895 Site: position = -142 score = 5.37 sequence = TTGATATATATCAA Gene: CKO_00285: Predicted cytochrome C-type biogenesis protein |
|
*
Enterobacter sp. 638 Site: position = -147 score = 5.25 sequence = TTGATTTAAGTCAA Gene: Ent638_2992: Predicted cytochrome C-type biogenesis protein |
Gene: EAM_2449: Predicted cytochrome C-type biogenesis protein |
|
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -141 score = 5.37 sequence = TTGATATATATCAA Gene: b2503: Predicted cytochrome C-type biogenesis protein |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -144 score = 5.47 sequence = TTGATTTATATCAA Gene: KPN_02828: Predicted cytochrome C-type biogenesis protein |
|
|
*
Salmonella typhimurium LT2 Site: position = -143 score = 5.14 sequence = TTGACTTAAATCAA Gene: STM2503: Predicted cytochrome C-type biogenesis protein |
*
Serratia proteamaculans 568 Site: position = -137 score = 4.42 sequence = TTGATCGCAGTCAA Gene: Spro_3543: Predicted cytochrome C-type biogenesis protein |
|
Predicted cytochrome C-type biogenesis protein |
| CRON 80. | |||||||||||||
| hemA |
Gene: CKO_01274: Glutamyl-tRNA reductase (EC 1.2.1.70) |
Gene: ETAE_1405: Glutamyl-tRNA reductase (EC 1.2.1.70) |
*
Enterobacter sp. 638 Site: position = -82 score = 4.27 sequence = TTGTCTTAAATCAT Gene: Ent638_2338: Glutamyl-tRNA reductase (EC 1.2.1.70) |
Gene: EAM_1585: Glutamyl-tRNA reductase (EC 1.2.1.70) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -134 score = 4.85 sequence = Gene: ECA2189: Glutamyl-tRNA reductase (EC 1.2.1.70) |
Gene: b1210: Glutamyl-tRNA reductase (EC 1.2.1.70) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -143 score = 4.44 sequence = TTGTCTGAAATCAA Gene: KPN_02235: Glutamyl-tRNA reductase (EC 1.2.1.70) |
Gene: plu2069: Glutamyl-tRNA reductase (EC 1.2.1.70) |
Gene: PMI1086: Glutamyl-tRNA reductase (EC 1.2.1.70) |
*
Salmonella typhimurium LT2 Site: position = -131 score = 4.27 sequence = TTGTCTTAAATCAT Gene: STM1777: Glutamyl-tRNA reductase (EC 1.2.1.70) |
Gene: Spro_1989: Glutamyl-tRNA reductase (EC 1.2.1.70) |
Gene: y2291: Glutamyl-tRNA reductase (EC 1.2.1.70) |
Glutamyl-tRNA reductase (EC 1.2.1.70) |
| prfA |
Gene: CKO_01275: Peptide chain release factor 1 |
Gene: ETAE_1406: Peptide chain release factor 1 |
Gene: Ent638_2337: Peptide chain release factor 1 |
Gene: EAM_1586: Peptide chain release factor 1 |
Gene: ECA2190: Peptide chain release factor 1 |
Gene: b1211: Peptide chain release factor 1 |
Gene: KPN_02234: Peptide chain release factor 1 |
Gene: plu2070: Peptide chain release factor 1 |
Gene: PMI1087: Peptide chain release factor 1 |
Gene: STM1776: Peptide chain release factor 1 |
Gene: Spro_1990: Peptide chain release factor 1 |
Gene: y2290: Peptide chain release factor 1 |
Peptide chain release factor 1 |
| prmC |
Gene: CKO_01276: Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 |
Gene: ETAE_1407: Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 |
Gene: Ent638_2336: Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 |
Gene: EAM_1587: Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 |
Gene: ECA2191: Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 |
Gene: b1212: Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 |
Gene: KPN_02233: Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 |
Gene: plu2071: Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 |
Gene: PMI1088: Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 |
Gene: STM1775: Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 |
Gene: Spro_1991: Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 |
Gene: y2289: Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 |
Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 |
| CRON 81. | |||||||||||||
| sdhC |
*
Citrobacter koseri ATCC BAA-895 Site: position = 25 score = 3.61 sequence = ATGTGAAAAAACAA Gene: CKO_02438: Succinate dehydrogenase cytochrome b-556 subunit |
*
Edwardsiella tarda EIB202 Site: position = 10 score = 4.02 sequence = Gene: ETAE_2588: Succinate dehydrogenase cytochrome b-556 subunit |
Gene: Ent638_1222: Succinate dehydrogenase cytochrome b-556 subunit |
Gene: EAM_1168: Succinate dehydrogenase cytochrome b-556 subunit |
Gene: ECA1357: Succinate dehydrogenase cytochrome b-556 subunit |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = 10 score = 3.61 sequence = ATGTGAAAAAACAA Gene: b0721: Succinate dehydrogenase cytochrome b-556 subunit |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -104 score = 3.61 sequence = ATGTGAAAAAACAA Gene: KPN_00728: Succinate dehydrogenase cytochrome b-556 subunit |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -127 score = 4.02 sequence = TTGTGAAAAAACAA Gene: plu1426: Succinate dehydrogenase cytochrome b-556 subunit |
*
Proteus mirabilis HI4320 Site: position = -2 score = 4.02 sequence = TTGTGAAAAAACAA Gene: PMI0565: Succinate dehydrogenase cytochrome b-556 subunit |
*
Salmonella typhimurium LT2 Site: position = 10 score = 3.61 sequence = ATGTGAAAAAACAA Gene: STM0732: Succinate dehydrogenase cytochrome b-556 subunit |
*
Serratia proteamaculans 568 Site: position = -249 score = 4.05 sequence = GTGATCTAAATCAC Gene: Spro_1263: Succinate dehydrogenase cytochrome b-556 subunit |
*
Yersinia pestis KIM Site: position = -224 score = 3.83 sequence = ATGTTATCAATCAG Gene: y3071: Succinate dehydrogenase cytochrome b-556 subunit |
Succinate dehydrogenase cytochrome b-556 subunit |
| sdhD |
Gene: CKO_02437: Succinate dehydrogenase hydrophobic membrane anchor protein |
Gene: ETAE_2587: Succinate dehydrogenase hydrophobic membrane anchor protein |
Gene: Ent638_1223: Succinate dehydrogenase hydrophobic membrane anchor protein |
Gene: EAM_1169: Succinate dehydrogenase hydrophobic membrane anchor protein |
Gene: ECA1358: Succinate dehydrogenase hydrophobic membrane anchor protein |
Gene: b0722: Succinate dehydrogenase hydrophobic membrane anchor protein |
Gene: KPN_00729: Succinate dehydrogenase hydrophobic membrane anchor protein |
Gene: plu1427: Succinate dehydrogenase hydrophobic membrane anchor protein |
Gene: PMI0566: Succinate dehydrogenase hydrophobic membrane anchor protein |
Gene: STM0733: Succinate dehydrogenase hydrophobic membrane anchor protein |
Gene: Spro_1264: Succinate dehydrogenase hydrophobic membrane anchor protein |
Gene: y3070: Succinate dehydrogenase hydrophobic membrane anchor protein |
Succinate dehydrogenase hydrophobic membrane anchor protein |
| sdhA |
Gene: CKO_02436: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
Gene: ETAE_2586: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
Gene: Ent638_1224: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
Gene: EAM_1170: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
Gene: ECA1359: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
Gene: b0723: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
Gene: KPN_00730: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
Gene: plu1428: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
Gene: PMI0567: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
Gene: STM0734: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
Gene: Spro_1265: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
Gene: y3069: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
| sdhB |
Gene: CKO_02435: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: ETAE_2585: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: Ent638_1225: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: EAM_1171: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: ECA1360: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: b0724: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: KPN_00731: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: plu1429: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: PMI0568: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: STM0735: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: Spro_1266: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: y3068: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
| CRON 82. | |||||||||||||
| ansB |
Gene: CKO_04332: L-asparaginase (EC 3.5.1.1) |
*
Edwardsiella tarda EIB202 Site: position = 0 score = 3.7 sequence = ATGAAGTTAGTCAA Gene: ETAE_2179: L-asparaginase (EC 3.5.1.1) |
|
|
|
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -71 score = 4.52 sequence = TTGTTTAACGTCAA Gene: b2957: L-asparaginase (EC 3.5.1.1) |
|
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -55 score = 3.67 sequence = TTTATTGTTATCAT Gene: plu1616: L-asparaginase (EC 3.5.1.1) |
*
Proteus mirabilis HI4320 Site: position = -139 score = 4.2 sequence = TTGATTTTAAATAA Gene: PMI0708: L-asparaginase (EC 3.5.1.1) |
Gene: STM3106: L-asparaginase (EC 3.5.1.1) |
Gene: Spro_1705: L-asparaginase (EC 3.5.1.1) |
*
Yersinia pestis KIM Site: position = 0 score = 3.61 sequence = ATGAAATATATAAA Gene: y2787: L-asparaginase (EC 3.5.1.1) |
L-asparaginase (EC 3.5.1.1) |
| CRON 83. | |||||||||||||
| aer |
*
Citrobacter koseri ATCC BAA-895 Site: position = -101 score = 4.15 sequence = GCGATCTAAATCAA Gene: CKO_04485: Aerotaxis sensor receptor |
|
Gene: Ent638_3527: Aerotaxis sensor receptor |
Gene: EAM_0329: Aerotaxis sensor receptor |
|
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -100 score = 4.15 sequence = GCGATCTAAATCAA Gene: b3072: Aerotaxis sensor receptor |
|
|
*
Proteus mirabilis HI4320 Site: position = -37 score = 3.8 sequence = TTGAGATATCTCAT Gene: PMI2813: Aerotaxis sensor receptor |
Gene: STM3217: Aerotaxis sensor receptor |
|
|
Aerotaxis sensor receptor |
| CRON 84. | |||||||||||||
| frdA |
*
Citrobacter koseri ATCC BAA-895 Site: position = -151 score = 4.0 sequence = TTAATCAGAATCAA Gene: CKO_03678: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
Gene: ETAE_0338: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
*
Enterobacter sp. 638 Site: position = -31 score = 3.64 sequence = TTGCGGAATAACAA Gene: Ent638_0343: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
|
Gene: ECA3969: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
Gene: b4154: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
Gene: KPN_04553: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -239 score = 4.12 sequence = Gene: plu4124: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
*
Proteus mirabilis HI4320 Site: position = -208 score = 3.96 sequence = Gene: PMI3588: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
*
Salmonella typhimurium LT2 Site: position = -191 score = 4.43 sequence = TTAATCAAAATCAA Gene: STM4343: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
*
Serratia proteamaculans 568 Site: position = -63 score = 3.7 sequence = TTTATAAATATTAA Gene: Spro_0419: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
Gene: y0617: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
| frdB |
Gene: CKO_03679: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: ETAE_0337: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: Ent638_0342: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
|
Gene: ECA3970: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: b4153: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: KPN_04552: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: plu4125: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: PMI3587: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: STM4342: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: Spro_0418: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: y0616: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
| frdC |
Gene: CKO_03680: Fumarate reductase subunit C |
Gene: ETAE_0336: Fumarate reductase subunit C |
Gene: Ent638_0341: Fumarate reductase subunit C |
|
Gene: ECA3971: Fumarate reductase subunit C |
Gene: b4152: Fumarate reductase subunit C |
Gene: KPN_04551: Fumarate reductase subunit C |
Gene: plu4126: Fumarate reductase subunit C |
Gene: PMI3586: Fumarate reductase subunit C |
Gene: STM4341: Fumarate reductase subunit C |
Gene: Spro_0417: Fumarate reductase subunit C |
Gene: y0615: Fumarate reductase subunit C |
Fumarate reductase subunit C |
| frdD |
Gene: CKO_03681: Fumarate reductase subunit D |
Gene: ETAE_0335: Fumarate reductase subunit D |
Gene: Ent638_0340: Fumarate reductase subunit D |
|
Gene: ECA3972: Fumarate reductase subunit D |
Gene: b4151: Fumarate reductase subunit D |
Gene: KPN_04550: Fumarate reductase subunit D |
Gene: plu4127: Fumarate reductase subunit D |
Gene: PMI3585: Fumarate reductase subunit D |
Gene: STM4340: Fumarate reductase subunit D |
Gene: Spro_0416: Fumarate reductase subunit D |
Gene: y0614: Fumarate reductase subunit D |
Fumarate reductase subunit D |
| CRON 85. | |||||||||||||
| gltB |
Gene: CKO_04620: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
Gene: ETAE_0527: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
Gene: Ent638_3656: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
|
Gene: ECA0312: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -156 score = 3.93 sequence = TTGACCTGTATCAG Gene: b3212: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -114 score = 3.87 sequence = ATGTTGTACGACAA Gene: KPN_03624: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -362 score = 4.09 sequence = GTGATATAAATCAC Site: position = -334 score = 4.09 sequence = CTGATCTATATCAC Gene: plu4009: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
*
Proteus mirabilis HI4320 Site: position = -252 score = 4.12 sequence = TTTTTATTTATCAA Site: position = -353 score = 3.69 sequence = TTATCTAACATCAA Gene: PMI3677: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
Gene: STM3330: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
*
Serratia proteamaculans 568 Site: position = -330 score = 3.63 sequence = ATATTAAATATCAA Gene: Spro_4344: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
*
Yersinia pestis KIM Site: position = -72 score = 3.82 sequence = CTGTCTGATATCAA Gene: y0128: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
| gltD |
Gene: CKO_04622: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Gene: ETAE_0526: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Gene: Ent638_3657: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
|
Gene: ECA0311: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Gene: b3213: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Gene: KPN_03625: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Gene: plu4010: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Gene: PMI3676: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Gene: STM3331: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Gene: Spro_4345: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Gene: y0129: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
| CRON 86. | |||||||||||||
| glgC |
Gene: CKO_04849: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
*2
Edwardsiella tarda EIB202 Site: position = -153 score = 4.78 sequence = TTCATTTATATCAA Gene: ETAE_3306: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Gene: ETAE_3309: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
Gene: Ent638_3838: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
Gene: EAM_3270: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
Gene: ECA4149: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
Gene: b3430: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
Gene: KPN_03796: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
|
|
Gene: STM3536: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
Gene: Spro_4645: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
Gene: y3888: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
| glgB |
Gene: CKO_04851: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) |
Gene: ETAE_3307: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) |
*
Enterobacter sp. 638 Site: position = -241 score = 3.69 sequence = TTGTTAAATCTCAG Gene: Ent638_3840: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) |
Gene: EAM_3272: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -38 score = 4.25 sequence = TTTATTTAATTCAA Gene: ECA4151: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) |
Gene: b3432: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) |
Gene: KPN_03798: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) |
|
|
*
Salmonella typhimurium LT2 Site: position = -199 score = 3.95 sequence = TTCATTTTTATCAG Gene: STM3538: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) |
Gene: Spro_4647: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) |
*
Yersinia pestis KIM Site: position = -25 score = 4.24 sequence = ATGCTATTAATCAA Gene: y3886: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) |
1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) |
| glgX |
Gene: CKO_04850: Glycogen debranching enzyme (EC 3.2.1.-) |
Gene: ETAE_3308: Glycogen debranching enzyme (EC 3.2.1.-) |
Gene: Ent638_3839: Glycogen debranching enzyme (EC 3.2.1.-) |
Gene: EAM_3271: Glycogen debranching enzyme (EC 3.2.1.-) |
Gene: ECA4150: Glycogen debranching enzyme (EC 3.2.1.-) |
Gene: b3431: Glycogen debranching enzyme (EC 3.2.1.-) |
Gene: KPN_03797: Glycogen debranching enzyme (EC 3.2.1.-) |
|
|
Gene: STM3537: Glycogen debranching enzyme (EC 3.2.1.-) |
Gene: Spro_4646: Glycogen debranching enzyme (EC 3.2.1.-) |
Gene: y3887: Glycogen debranching enzyme (EC 3.2.1.-) |
Glycogen debranching enzyme (EC 3.2.1.-) |
| glgA |
Gene: CKO_04848: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
Gene: ETAE_3310: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
Gene: Ent638_3837: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
Gene: EAM_3269: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
Gene: ECA4148: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
Gene: b3429: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
Gene: KPN_03795: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
|
|
Gene: STM3535: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
Gene: Spro_4644: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
Gene: y3889: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
| glgP |
Gene: CKO_04847: Glycogen phosphorylase (EC 2.4.1.1) |
Gene: ETAE_3311: Glycogen phosphorylase (EC 2.4.1.1) |
Gene: Ent638_3836: Glycogen phosphorylase (EC 2.4.1.1) |
Gene: EAM_3268: Glycogen phosphorylase (EC 2.4.1.1) |
Gene: ECA4147: Glycogen phosphorylase (EC 2.4.1.1) |
Gene: b3428: Glycogen phosphorylase (EC 2.4.1.1) |
Gene: KPN_03794: Glycogen phosphorylase (EC 2.4.1.1) |
|
|
Gene: STM3534: Glycogen phosphorylase (EC 2.4.1.1) |
Gene: Spro_4643: Glycogen phosphorylase (EC 2.4.1.1) |
Gene: y3890: Glycogen phosphorylase (EC 2.4.1.1) |
Glycogen phosphorylase (EC 2.4.1.1) |
| CRON 87. | |||||||||||||
| narX |
Gene: CKO_01297: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) |
|
*
Enterobacter sp. 638 Site: position = -251 score = 5.46 sequence = TTGATATAAATCAA Gene: Ent638_2317: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) |
|
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -268 score = 4.95 sequence = TTGATGCAAATCAA Gene: ECA2029: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -279 score = 5.36 sequence = TTGATGTAAATCAA Site: position = -241 score = 4.56 sequence = TTGATATTTATCAT Gene: b1222: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -251 score = 5.46 sequence = TTGATATAAATCAA Gene: KPN_02216: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) |
|
*
Proteus mirabilis HI4320 Site: position = -235 score = 4.46 sequence = ATGATCTGCATCAA Gene: PMI3569: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) |
*
Salmonella typhimurium LT2 Site: position = -281 score = 5.46 sequence = TTGATATAAATCAA Gene: STM1766: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) |
*
Serratia proteamaculans 568 Site: position = -301 score = 5.36 sequence = TTGATGTAAATCAA Gene: Spro_2899: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) |
Gene: y2351: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) |
Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) |
| narL |
Gene: CKO_01296: Nitrate/nitrite response regulator protein NarL, LuxR family |
|
Gene: Ent638_2318: Nitrate/nitrite response regulator protein NarL, LuxR family |
|
Gene: ECA2028: Nitrate/nitrite response regulator protein NarL, LuxR family |
Gene: b1221: Nitrate/nitrite response regulator protein NarL, LuxR family |
Gene: KPN_02217: Nitrate/nitrite response regulator protein NarL, LuxR family |
|
Gene: PMI3568: Nitrate/nitrite response regulator protein NarL, LuxR family |
Gene: STM1767: Nitrate/nitrite response regulator protein NarL, LuxR family |
Gene: Spro_2900: Nitrate/nitrite response regulator protein NarL, LuxR family |
|
Nitrate/nitrite response regulator protein NarL, LuxR family |
| CRON 88. | |||||||||||||
| hmp |
*
Citrobacter koseri ATCC BAA-895 Site: position = -40 score = 4.39 sequence = TTGACATACATCAT Gene: CKO_00235: Nitric oxide dioxygenase (EC 1.14.12.17) |
Gene: ETAE_2822: Nitric oxide dioxygenase (EC 1.14.12.17) |
Gene: Ent638_3037: Nitric oxide dioxygenase (EC 1.14.12.17) |
|
Gene: ECA3251: Nitric oxide dioxygenase (EC 1.14.12.17) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -40 score = 4.82 sequence = TTGAGATACATCAA Gene: b2552: Nitric oxide dioxygenase (EC 1.14.12.17) |
Gene: KPN_02877: Nitric oxide dioxygenase (EC 1.14.12.17) |
Gene: plu3292: Nitric oxide dioxygenase (EC 1.14.12.17) |
Gene: PMI1868: Nitric oxide dioxygenase (EC 1.14.12.17) |
*
Salmonella typhimurium LT2 Site: position = -40 score = 4.81 sequence = TTGATATACATCAT Gene: STM2556: Nitric oxide dioxygenase (EC 1.14.12.17) |
Gene: Spro_3639: Nitric oxide dioxygenase (EC 1.14.12.17) |
Gene: y1321: Nitric oxide dioxygenase (EC 1.14.12.17) |
Nitric oxide dioxygenase (EC 1.14.12.17) |
| CRON 89. | |||||||||||||
| caiT |
*
Citrobacter koseri ATCC BAA-895 Site: position = -218 score = 3.67 sequence = TTGTTTTACATTGA Gene: CKO_03343: L-carnitine/gamma-butyrobetaine antiporter |
*
Edwardsiella tarda EIB202 Site: position = -230 score = 3.61 sequence = TTCATTATAATCAC Gene: ETAE_2664: L-carnitine/gamma-butyrobetaine antiporter |
|
|
|
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -203 score = 3.66 sequence = TTAATCAAAATTAA Gene: b0040: L-carnitine/gamma-butyrobetaine antiporter |
|
|
*
Proteus mirabilis HI4320 Site: position = -118 score = 4.17 sequence = TTGATTATGATAAA Gene: PMI2654: L-carnitine/gamma-butyrobetaine antiporter |
Gene: STM0074: L-carnitine/gamma-butyrobetaine antiporter |
|
|
L-carnitine/gamma-butyrobetaine antiporter |
| caiA |
Gene: CKO_03344: Crotonobetainyl-CoA dehydrogenase (EC 1.3.99.-) |
Gene: ETAE_2663: Crotonobetainyl-CoA dehydrogenase (EC 1.3.99.-) |
|
|
|
Gene: b0039: Crotonobetainyl-CoA dehydrogenase (EC 1.3.99.-) |
|
|
Gene: PMI2655: Crotonobetainyl-CoA dehydrogenase (EC 1.3.99.-) |
Gene: STM0073: Crotonobetainyl-CoA dehydrogenase (EC 1.3.99.-) |
|
|
Crotonobetainyl-CoA dehydrogenase (EC 1.3.99.-) |
| caiB |
Gene: CKO_03345: Crotonobetainyl-CoA:carnitine CoA-transferase (EC 2.8.3.-) |
Gene: ETAE_2662: Crotonobetainyl-CoA:carnitine CoA-transferase (EC 2.8.3.-) |
|
|
|
Gene: b0038: Crotonobetainyl-CoA:carnitine CoA-transferase (EC 2.8.3.-) |
|
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Gene: PMI2656: Crotonobetainyl-CoA:carnitine CoA-transferase (EC 2.8.3.-) |
Gene: STM0072: Crotonobetainyl-CoA:carnitine CoA-transferase (EC 2.8.3.-) |
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Crotonobetainyl-CoA:carnitine CoA-transferase (EC 2.8.3.-) |
| caiC |
Gene: CKO_03346: Crotonobetaine carnitine-CoA ligase (EC 6.3.2.-) |
Gene: ETAE_2661: Crotonobetaine carnitine-CoA ligase (EC 6.3.2.-) |
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Gene: b0037: Crotonobetaine carnitine-CoA ligase (EC 6.3.2.-) |
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Gene: PMI2657: Crotonobetaine carnitine-CoA ligase (EC 6.3.2.-) |
Gene: STM0071: Crotonobetaine carnitine-CoA ligase (EC 6.3.2.-) |
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Crotonobetaine carnitine-CoA ligase (EC 6.3.2.-) |
| caiD |
Gene: CKO_03347: Carnitine racemase (EC 5.-.-.-) / Carnitinyl-CoA dehydratase (EC 4.2.1.-) |
Gene: ETAE_2660: Carnitine racemase (EC 5.-.-.-) / Carnitinyl-CoA dehydratase (EC 4.2.1.-) |
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Gene: b0036: Carnitine racemase (EC 5.-.-.-) / Carnitinyl-CoA dehydratase (EC 4.2.1.-) |
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Gene: STM0070: Carnitine racemase (EC 5.-.-.-) / Carnitinyl-CoA dehydratase (EC 4.2.1.-) |
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Carnitine racemase (EC 5.-.-.-) / Carnitinyl-CoA dehydratase (EC 4.2.1.-) |
| caiE |
Gene: CKO_03348: possible synthesis of cofactor for carnitine racemase and dehydratase |
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Gene: b0035: possible synthesis of cofactor for carnitine racemase and dehydratase |
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Gene: STM0069: possible synthesis of cofactor for carnitine racemase and dehydratase |
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possible synthesis of cofactor for carnitine racemase and dehydratase |
| CRON 90. | |||||||||||||
| glnK |
Gene: CKO_02708: Nitrogen assimilation regulatory protein |
Gene: ETAE_1003: Nitrogen assimilation regulatory protein |
Gene: Ent638_0918: Nitrogen assimilation regulatory protein |
Gene: EAM_1004: Nitrogen assimilation regulatory protein |
Gene: ECA1160: Nitrogen assimilation regulatory protein |
Gene: b0450: Nitrogen assimilation regulatory protein |
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Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -59 score = 4.03 sequence = Gene: KPN_00413: Nitrogen assimilation regulatory protein |
Gene: plu3857: Nitrogen assimilation regulatory protein |
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Proteus mirabilis HI4320 Site: position = 0 score = 3.77 sequence = ATGAAATATATCAT Gene: PMI0126: Nitrogen assimilation regulatory protein |
Gene: STM0462: Nitrogen assimilation regulatory protein |
Gene: Spro_1109: Nitrogen assimilation regulatory protein |
Gene: y1041: Nitrogen assimilation regulatory protein |
Nitrogen assimilation regulatory protein |
| amtB |
Gene: CKO_02707: Ammonium transporter |
Gene: ETAE_1004: Ammonium transporter |
Gene: Ent638_0919: Ammonium transporter |
Gene: EAM_1005: Ammonium transporter |
Gene: ECA1161: Ammonium transporter |
Gene: b0451: Ammonium transporter |
Gene: KPN_00414: Ammonium transporter |
Gene: plu3856: Ammonium transporter |
Gene: PMI0127: Ammonium transporter |
Gene: STM0463: Ammonium transporter |
Gene: Spro_1110: Ammonium transporter |
Gene: y1042: Ammonium transporter |
Ammonium transporter |
| CRON 91. | |||||||||||||
| ompW |
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Citrobacter koseri ATCC BAA-895 Site: position = -117 score = 4.12 sequence = TTAATCTGGATCAA Gene: CKO_01333: outer membrane protein W; colicin S4 receptor; putative transporter |
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Edwardsiella tarda EIB202 Site: position = -157 score = 4.94 sequence = TTGATGTCTATCAA Gene: ETAE_1528: outer membrane protein W; colicin S4 receptor; putative transporter |
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Enterobacter sp. 638 Site: position = -117 score = 4.12 sequence = TTAATCTGGATCAA Gene: Ent638_2283: outer membrane protein W; colicin S4 receptor; putative transporter |
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Erwinia amylovora ATCC 49946 Site: position = -160 score = 5.42 sequence = TTGATCTAAATCAA Gene: EAM_1884: outer membrane protein W; colicin S4 receptor; putative transporter |
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Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -160 score = 4.84 sequence = TTGATCTGGATCAA Gene: ECA2303: outer membrane protein W; colicin S4 receptor; putative transporter |
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Escherichia coli str. K-12 substr. MG1655 Site: position = -117 score = 4.14 sequence = TTAATCCAGATCAA Site: position = -162 score = 4.85 sequence = TTGATTTAAATCAC Gene: b1256: outer membrane protein W; colicin S4 receptor; putative transporter |
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Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -247 score = 4.18 sequence = TTGATTTCACTCAT Site: position = -80 score = 4.12 sequence = TTAATCTGGATCAA Gene: KPN_01248: outer membrane protein W; colicin S4 receptor; putative transporter |
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Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -160 score = 4.98 sequence = TTGATTTGGATCAA Gene: plu2478: outer membrane protein W; colicin S4 receptor; putative transporter |
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Proteus mirabilis HI4320 Site: position = -164 score = 4.78 sequence = TTGATGTGGATCAA Gene: PMI1350: outer membrane protein W; colicin S4 receptor; putative transporter |
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Salmonella typhimurium LT2 Site: position = -117 score = 4.12 sequence = TTAATCTGGATCAA Gene: STM1732: outer membrane protein W; colicin S4 receptor; putative transporter |
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Serratia proteamaculans 568 Site: position = -131 score = 5.0 sequence = TTGATTCAGATCAA Gene: Spro_2674: outer membrane protein W; colicin S4 receptor; putative transporter |
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Yersinia pestis KIM Site: position = -171 score = 3.64 sequence = ATGATAAATGGCAA Site: position = -147 score = 4.45 sequence = ATGATCCAGATCAA Gene: y2044: outer membrane protein W; colicin S4 receptor; putative transporter |
outer membrane protein W; colicin S4 receptor; putative transporter |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |