Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Fnr in Serratia proteamaculans 568

Properties
Regulator type: Transcription factor
TF locus tag: Spro_2582
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Energy metabolism; Anaerobic metabolism
Effector: Oxygen
Regulog: Fnr - Enterobacteriales
Statistics of regulated genes:
- Genes 109
- Operons 46
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 685 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -360
Score: 4.7
Sequence: TTGTTTCAGATCAA
Locus tag: Spro_1271
Name: cydA
Funciton: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
Locus tag: Spro_1272
Name: cydB
Funciton: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)
cydA
Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
cydB
Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)

Position: -301
Score: 5.4
Sequence: TTGATGTAAATCAA
Locus tag: Spro_2899
Name: narX
Funciton: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-)
Locus tag: Spro_2900
Name: narL
Funciton: Nitrate/nitrite response regulator protein NarL, LuxR family
narX
Nitrate/nitrite sensor protein NarX (EC 2.7.3.-)
narL
Nitrate/nitrite response regulator protein NarL, LuxR family

Position: -66
Score: 4.4
Sequence: TTGCGCTAAATCAA
Locus tag: Spro_1666
Name: hcp
Funciton: Hydroxylamine reductase (EC 1.7.-.-)
Locus tag: Spro_1665
Name: hcr
Funciton: NADH oxidoreductase hcr (EC 1.-.-.-)
hcp
Hydroxylamine reductase (EC 1.7.-.-)
hcr
NADH oxidoreductase hcr (EC 1.-.-.-)

Position: -107
Score: 4
Sequence: TTGACGGATATCAT
Locus tag: Spro_1579
Name: dcuC
Funciton: C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1)
dcuC
C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1)

Position: -249
Score: 4.1
Sequence: GTGATCTAAATCAC
Locus tag: Spro_1263
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Spro_1264
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Spro_1265
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Spro_1266
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
sdhC
Succinate dehydrogenase cytochrome b-556 subunit
sdhD
Succinate dehydrogenase hydrophobic membrane anchor protein
sdhA
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
sdhB
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)

Position: -189
Score: 4.2
Sequence: TTGACATAAAACAT
Position: -136
Score: 4.9
Sequence: TTGACTTTAATCAA
Locus tag: Spro_3682
Name: yfiD
Funciton: Stress-induced alternate pyruvate formate-lyase subunit
yfiD
Stress-induced alternate pyruvate formate-lyase subunit

Position: -74
Score: 4.2
Sequence: TTGATCTCTGTCAT
Locus tag: Spro_4343
Name: yhcC
Funciton: COG1242: Predicted Fe-S oxidoreductase
yhcC
COG1242: Predicted Fe-S oxidoreductase

Position: -131
Score: 5
Sequence: TTGATTCAGATCAA
Locus tag: Spro_2674
Name: ompW
Funciton: outer membrane protein W; colicin S4 receptor; putative transporter
ompW
outer membrane protein W; colicin S4 receptor; putative transporter

Position: 0
Score: 4.3
Sequence: ATGATTAAAATCAG
Locus tag: Spro_0953
Name: nqrA
Funciton: Na-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-)
Locus tag: Spro_0954
Name: nqrB
Funciton: Na-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-)
Locus tag: Spro_0955
Name: nqrC
Funciton: Na-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-)
Locus tag: Spro_0956
Name: nqrD
Funciton: Na-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-)
Locus tag: Spro_0957
Name: nqrE
Funciton: Na-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-)
Locus tag: Spro_0958
Name: nqrF
Funciton: Na-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-)
nqrA
Na-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-)
nqrB
Na-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-)
nqrC
Na-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-)
nqrD
Na-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-)
nqrE
Na-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-)
nqrF
Na-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-)

Position: -72
Score: 5
Sequence: TTGATTTGCATCAA
Locus tag: Spro_4595
Name: nirB
Funciton: Nitrite reductase, large subunit (EC 1.7.1.4)
Locus tag: Spro_4596
Name: nirD
Funciton: Nitrite reductase, small subunit (EC 1.7.1.4)
Locus tag: Spro_4597
Name: nirC
Funciton: Nitrite transporter
Locus tag: Spro_4598
Name: cysG
Funciton: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
nirB
Nitrite reductase, large subunit (EC 1.7.1.4)
nirD
Nitrite reductase, small subunit (EC 1.7.1.4)
nirC
Nitrite transporter
cysG
Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)

Position: -137
Score: 4.4
Sequence: TTGATCGCAGTCAA
Locus tag: Spro_3543
Name: yfgF
Funciton: Predicted cytochrome C-type biogenesis protein
yfgF
Predicted cytochrome C-type biogenesis protein

Position: -89
Score: 4.6
Sequence: TTGATTATCGTCAA
Locus tag: Spro_1968
Name: yhjA
Funciton: Cytochrome c551 peroxidase (EC 1.11.1.5)
yhjA
Cytochrome c551 peroxidase (EC 1.11.1.5)

Position: -149
Score: 5.2
Sequence: TTGATGTACATCAA
Locus tag: Spro_1926
Name: ndh
Funciton: NADH dehydrogenase (EC 1.6.99.3)
ndh
NADH dehydrogenase (EC 1.6.99.3)

Position: -121
Score: 4.1
Sequence: ATGATGTTAATCAT
Locus tag: Spro_3316
Name: ackA
Funciton: Acetate kinase (EC 2.7.2.1)
ackA
Acetate kinase (EC 2.7.2.1)

Position: -284
Score: 3.8
Sequence: CTGATTTAACTCAC
Locus tag: Spro_4628
Name: null
Funciton: Ferrous iron transport protein A
Locus tag: Spro_4629
Name: feoB
Funciton: Ferrous iron transport protein B
Locus tag: Spro_4630
Name: feoC
Funciton: Ferrous iron-sensisng transcriptional regulator FeoC, FeoC family
Ferrous iron transport protein A
feoB
Ferrous iron transport protein B
feoC
Ferrous iron-sensisng transcriptional regulator FeoC, FeoC family

Position: -274
Score: 4.4
Sequence: ATGATTTAAATCAC
Locus tag: Spro_2704
Name: adhE
Funciton: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
adhE
Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)

Position: -164
Score: 4.2
Sequence: TTGATAGCAGACAA
Position: -40
Score: 4.2
Sequence: ATGACGTTTATCAA
Locus tag: Spro_1687
Name: null
Funciton: Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-)
Locus tag: Spro_1688
Name: ynfG
Funciton: Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-)
Locus tag: Spro_1689
Name: ynfH
Funciton: Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-)
Locus tag: Spro_1690
Name: ynfI
Funciton: Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD
Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-)
ynfG
Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-)
ynfH
Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-)
ynfI
Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD

Position: -76
Score: 5.1
Sequence: TTGATCGAAATCAA
Locus tag: Spro_2641
Name: ybiY
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Locus tag: Spro_2642
Name: ybiW
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
ybiY
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
ybiW
Pyruvate formate-lyase (EC 2.3.1.54)

Position: -188
Score: 3.3
Sequence: TTAATGGCTATCAT
Locus tag: Spro_1959
Name: dcuS
Funciton: Fumarate respiration sensor kinase protein DcuS
Locus tag: Spro_1958
Name: dcuR
Funciton: Fumarate respiration transcriptional regulator DcuR
dcuS
Fumarate respiration sensor kinase protein DcuS
dcuR
Fumarate respiration transcriptional regulator DcuR

Position: 31
Score: 3.7
Sequence: TTGTTCAGCATCAT
Locus tag: Spro_2068
Name: puuA
Funciton: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11)
puuA
Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11)

Position: -359
Score: 3.8
Sequence: TTGCTATTGATCAC
Locus tag: Spro_4636
Name: malP
Funciton: Maltodextrin phosphorylase (EC 2.4.1.1)
Locus tag: Spro_4635
Name: malQ
Funciton: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
malP
Maltodextrin phosphorylase (EC 2.4.1.1)
malQ
4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)

Position: -143
Score: 3.9
Sequence: ATAATTTAACTCAA
Position: -81
Score: 4.6
Sequence: ATGATCCAAATCAA
Locus tag: Spro_1703
Name: focA
Funciton: Formate efflux transporter (TC 2.A.44 family)
Locus tag: Spro_1702
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
focA
Formate efflux transporter (TC 2.A.44 family)
pflB
Pyruvate formate-lyase (EC 2.3.1.54)

Position: -63
Score: 3.7
Sequence: TTTATAAATATTAA
Locus tag: Spro_0419
Name: frdA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Spro_0418
Name: frdB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Spro_0417
Name: frdC
Funciton: Fumarate reductase subunit C
Locus tag: Spro_0416
Name: frdD
Funciton: Fumarate reductase subunit D
frdA
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
frdB
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
frdC
Fumarate reductase subunit C
frdD
Fumarate reductase subunit D

Position: -75
Score: 5.4
Sequence:
Locus tag: Spro_2898
Name: narK
Funciton: Nitrate/nitrite antiporter
narK
Nitrate/nitrite antiporter

Position: -74
Score: 4.3
Sequence: TTGTTCCTTATCAA
Locus tag: Spro_0200
Name: glpA
Funciton: Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3)
Locus tag: Spro_0201
Name: glpB
Funciton: Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC 1.1.5.3)
Locus tag: Spro_0202
Name: glpC
Funciton: Anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3)
glpA
Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3)
glpB
Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC 1.1.5.3)
glpC
Anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3)

Position: -222
Score: 5
Sequence: TTGATTAAAGTCAA
Position: -169
Score: 4.4
Sequence: ATGTTTTATGTCAA
Locus tag: Spro_3683
Name: ung
Funciton: Uracil-DNA glycosylase (EC 3.2.2.27)
ung
Uracil-DNA glycosylase (EC 3.2.2.27)

Position: -140
Score: 4.7
Sequence: TTGATCGCAATCAA
Locus tag: Spro_2883
Name: narG
Funciton: Respiratory nitrate reductase alpha chain (EC 1.7.99.4)
Locus tag: Spro_2882
Name: narH
Funciton: Respiratory nitrate reductase beta chain (EC 1.7.99.4)
Locus tag: Spro_2881
Name: narJ
Funciton: Respiratory nitrate reductase delta chain (EC 1.7.99.4)
Locus tag: Spro_2880
Name: narI
Funciton: Respiratory nitrate reductase gamma chain (EC 1.7.99.4)
narG
Respiratory nitrate reductase alpha chain (EC 1.7.99.4)
narH
Respiratory nitrate reductase beta chain (EC 1.7.99.4)
narJ
Respiratory nitrate reductase delta chain (EC 1.7.99.4)
narI
Respiratory nitrate reductase gamma chain (EC 1.7.99.4)

Position: -330
Score: 3.6
Sequence: ATATTAAATATCAA
Locus tag: Spro_4344
Name: gltB
Funciton: Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
Locus tag: Spro_4345
Name: gltD
Funciton: Glutamate synthase [NADPH] small chain (EC 1.4.1.13)
gltB
Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
gltD
Glutamate synthase [NADPH] small chain (EC 1.4.1.13)

Position: -312
Score: 3.7
Sequence: GTGATTCCGGTCAA
Locus tag: Spro_1320
Name: moaA
Funciton: Molybdenum cofactor biosynthesis protein MoaA
Locus tag: Spro_1321
Name: moaB
Funciton: Molybdenum cofactor biosynthesis protein MoaB
Locus tag: Spro_1322
Name: moaC
Funciton: Molybdenum cofactor biosynthesis protein MoaC
Locus tag: Spro_1323
Name: moaD
Funciton: Molybdenum cofactor biosynthesis protein MoaD
Locus tag: Spro_1324
Name: moaE
Funciton: Molybdenum cofactor biosynthesis protein MoaE
moaA
Molybdenum cofactor biosynthesis protein MoaA
moaB
Molybdenum cofactor biosynthesis protein MoaB
moaC
Molybdenum cofactor biosynthesis protein MoaC
moaD
Molybdenum cofactor biosynthesis protein MoaD
moaE
Molybdenum cofactor biosynthesis protein MoaE

Position: -280
Score: 3.8
Sequence: TTTCTACACATCAA
Locus tag: Spro_3308
Name: nuoA
Funciton: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
Locus tag: Spro_3307
Name: nuoB
Funciton: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
Locus tag: Spro_3306
Name: nuoD
Funciton: NADH-ubiquinone oxidoreductase chains C and D (EC 1.6.5.3)
Locus tag: Spro_3305
Name: nuoE
Funciton: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
Locus tag: Spro_3304
Name: nuoF
Funciton: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
Locus tag: Spro_3303
Name: nuoG
Funciton: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
Locus tag: Spro_3302
Name: nuoH
Funciton: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
Locus tag: Spro_3301
Name: nuoI
Funciton: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
Locus tag: Spro_3300
Name: nuoJ
Funciton: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
Locus tag: Spro_3299
Name: nuoK
Funciton: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
Locus tag: Spro_3298
Name: nuoL
Funciton: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
Locus tag: Spro_3297
Name: nuoM
Funciton: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
Locus tag: Spro_3296
Name: nuoN
Funciton: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
nuoA
NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
nuoB
NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
nuoD
NADH-ubiquinone oxidoreductase chains C and D (EC 1.6.5.3)
nuoE
NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
nuoF
NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
nuoG
NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
nuoH
NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
nuoI
NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
nuoJ
NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
nuoK
NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
nuoL
NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
nuoM
NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
nuoN
NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)

Position: -227
Score: 3.9
Sequence: TTGAGTGATATCAC
Locus tag: Spro_4321
Name: uxaC
Funciton: Uronate isomerase (EC 5.3.1.12)
Locus tag: Spro_4320
Name: uxaA
Funciton: Altronate hydrolase (EC 4.2.1.7)
uxaC
Uronate isomerase (EC 5.3.1.12)
uxaA
Altronate hydrolase (EC 4.2.1.7)

Position: -189
Score: 3.8
Sequence: CAGATTAAAATCAA
Locus tag: Spro_3863
Name: dcuB
Funciton: C4-dicarboxylate transporter DcuB
dcuB
C4-dicarboxylate transporter DcuB

Position: -139
Score: 3.7
Sequence: TTATTTAAAATCAG
Locus tag: Spro_3192
Name: katG
Funciton: Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7)
katG
Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7)

Position: -174
Score: 3.8
Sequence: TTAATGCAGGTCAA
Locus tag: Spro_0243
Name: ysgA
Funciton: Predcited carboxymethylenebutenolidase (EC 3.1.1.45)
ysgA
Predcited carboxymethylenebutenolidase (EC 3.1.1.45)

Position: -3
Score: 4.3
Sequence: TTGATGGAAAGCAA
Locus tag: Spro_2025
Name: icdA
Funciton: Isocitrate dehydrogenase (EC 1.1.1.42)
icdA
Isocitrate dehydrogenase (EC 1.1.1.42)

Position: -117
Score: 4.6
Sequence: CTGATTTCGATCAA
Locus tag: Spro_4012
Name: pdhR
Funciton: Pyruvate dehydrogenase complex transcriptional regulator PdhR, GntR family
Locus tag: Spro_4011
Name: aceE
Funciton: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Locus tag: Spro_4010
Name: aceF
Funciton: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
Locus tag: Spro_4009
Name: lpdA
Funciton: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)
pdhR
Pyruvate dehydrogenase complex transcriptional regulator PdhR, GntR family
aceE
Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
aceF
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
lpdA
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)

Position: -217
Score: 4.7
Sequence: TTGTTCTACGTCAA
Locus tag: Spro_0525
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: Spro_0524
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD
Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
nrdG
Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)

Position: -145
Score: 4.1
Sequence: GTGACTTGAATCAA
Locus tag: Spro_4807
Name: pfkA
Funciton: 6-phosphofructokinase (EC 2.7.1.11)
pfkA
6-phosphofructokinase (EC 2.7.1.11)

Position: -256
Score: 4.6
Sequence: TTGATTAAAAGCAA
Locus tag: Spro_1739
Name: ssuE
Funciton: FMN reductase (EC 1.5.1.29)
Locus tag: Spro_1738
Name: ssuA
Funciton: Sulfonate ABC transporter, periplasmic sulfonate-binding protein ssuA / Alkanesulfonates-binding protein
Locus tag: Spro_1737
Name: ssuD
Funciton: Alkanesulfonate monooxygenase (EC 1.14.14.5)
Locus tag: Spro_1736
Name: ssuC
Funciton: Alkanesulfonates transport system permease protein
Locus tag: Spro_1735
Name: ssuB
Funciton: Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB
ssuE
FMN reductase (EC 1.5.1.29)
ssuA
Sulfonate ABC transporter, periplasmic sulfonate-binding protein ssuA / Alkanesulfonates-binding protein
ssuD
Alkanesulfonate monooxygenase (EC 1.14.14.5)
ssuC
Alkanesulfonates transport system permease protein
ssuB
Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB

Position: -96
Score: 3.6
Sequence: ATGATTTCCGTTAA
Locus tag: Spro_2009
Name: pepT
Funciton: Tripeptide aminopeptidase (EC 3.4.11.4)
pepT
Tripeptide aminopeptidase (EC 3.4.11.4)

Position: -293
Score: 3.6
Sequence: TTCTTTTACATTAA
Locus tag: Spro_1090
Name: cyoA
Funciton: Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-)
Locus tag: Spro_1089
Name: cyoB
Funciton: Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-)
Locus tag: Spro_1088
Name: cyoC
Funciton: Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-)
Locus tag: Spro_1087
Name: cyoD
Funciton: Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-)
Locus tag: Spro_1086
Name: cyoE
Funciton: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB
cyoA
Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-)
cyoB
Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-)
cyoC
Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-)
cyoD
Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-)
cyoE
Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB

Position: -223
Score: 3.6
Sequence: TTGCTGGAGATCAC
Locus tag: Spro_4464
Name: ubiC
Funciton: Chorismate--pyruvate lyase (EC 4.1.3.40)
Locus tag: Spro_4463
Name: ubiA
Funciton: 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-)
ubiC
Chorismate--pyruvate lyase (EC 4.1.3.40)
ubiA
4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-)

Position: -299
Score: 5.1
Sequence: TTGATATATGTCAA
Locus tag: Spro_0681
Name: arcA
Funciton: Aerobic respiration control protein arcA
arcA
Aerobic respiration control protein arcA

Position: -34
Score: 4.4
Sequence: TTGACGCATATCAA
Locus tag: Spro_2582
Name: fnr
Funciton: Fumarate and nitrate reduction regulatory protein
fnr
Fumarate and nitrate reduction regulatory protein

Position: -305
Score: 4.3
Sequence: TTGATAAGGAACAA
Locus tag: Spro_0199
Name: glpT
Funciton: Glycerol-3-phosphate transporter
Locus tag: Spro_0198
Name: glpQ
Funciton: Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46)
glpT
Glycerol-3-phosphate transporter
glpQ
Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46)

Position: -384
Score: 3.3
Sequence: ATTATTTGAATTAA
Locus tag: Spro_1608
Name: gnd
Funciton: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
gnd
6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD