Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Fnr in Escherichia coli str. K-12 substr. MG1655

Properties
Regulator type: Transcription factor
TF locus tag: b1334
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Energy metabolism; Anaerobic metabolism
Effector: Oxygen
Regulog: Fnr - Enterobacteriales
Statistics of regulated genes:
- Genes 216
- Operons 82
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 685 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -348
Score: 5.1
Sequence: TTGATATTTATCAA
Position: -296
Score: 4.6
Sequence: TTGTTCTCGATCAA
Locus tag: b0733
Name: cydA
Funciton: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
Locus tag: b0734
Name: cydB
Funciton: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)
b0733
cydA
Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
b0734
cydB
Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)
Position: -213
Score: 4.1
Sequence: TTGATTTATTTCAC
Locus tag: b0619
Name: citA
Funciton: Anaerobic citrate fermentation two-component regulatory system sensor kinase CitA (EC 2.7.3.-)
Locus tag: b0620
Name: citB
Funciton: Anaerobic citrate fermentation two-component regulatory system, response regulator CitB, OmpR family
b0619
citA
Anaerobic citrate fermentation two-component regulatory system sensor kinase CitA (EC 2.7.3.-)
b0620
citB
Anaerobic citrate fermentation two-component regulatory system, response regulator CitB, OmpR family
Position: -67
Score: 4.4
Sequence: TTGACGCACATCAA
Locus tag: b0824
Name: ybiY
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Locus tag: b0823
Name: ybiW
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
b0824
ybiY
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
b0823
ybiW
Pyruvate formate-lyase (EC 2.3.1.54)
Position: -40
Score: 4.8
Sequence: TTGAGATACATCAA
Locus tag: b2552
Name: hmp
Funciton: Nitric oxide dioxygenase (EC 1.14.12.17)
b2552
hmp
Nitric oxide dioxygenase (EC 1.14.12.17)
Position: -141
Score: 4.7
Sequence: TTGATTAAAGACAA
Locus tag: b4070
Name: nrfA
Funciton: Nitrite reductase, cytochrome c(552)
Locus tag: b4071
Name: nrfB
Funciton: Cytochrome c-type protein NrfB precursor
Locus tag: b4072
Name: nrfC
Funciton: Nitrite reductase, Fe-S center subunit
Locus tag: b4073
Name: nrfD
Funciton: Nitrite reductase, NrfD component
Locus tag: b4074
Name: nrfE
Funciton: Nitrite reductase, cytochrome c-type heme lyase subunit nrfE
Locus tag: b4075
Name: nrfF
Funciton: Nitrite reductase, cytochrome c-type heme lyase subunit nrfF
Locus tag: b4076
Name: nrfG
Funciton: Nitrite reductase, cytochrome c-type heme lyase subunit nrfG
b4070
nrfA
Nitrite reductase, cytochrome c(552)
b4071
nrfB
Cytochrome c-type protein NrfB precursor
b4072
nrfC
Nitrite reductase, Fe-S center subunit
b4073
nrfD
Nitrite reductase, NrfD component
b4074
nrfE
Nitrite reductase, cytochrome c-type heme lyase subunit nrfE
b4075
nrfF
Nitrite reductase, cytochrome c-type heme lyase subunit nrfF
b4076
nrfG
Nitrite reductase, cytochrome c-type heme lyase subunit nrfG
Position: -243
Score: 4.6
Sequence: TTGACTTTAGTCAA
Locus tag: b2499
Name: purM
Funciton: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)
Locus tag: b2500
Name: purN
Funciton: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)
b2499
purM
Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)
b2500
purN
Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)
Position: -121
Score: 4.7
Sequence: TTGATTCCTATCAA
Locus tag: b3518
Name: yhjA
Funciton: Cytochrome c551 peroxidase (EC 1.11.1.5)
b3518
yhjA
Cytochrome c551 peroxidase (EC 1.11.1.5)
Position: -123
Score: 4.2
Sequence: TTGTTTGAAATCAC
Locus tag: b3739
Name: atpI
Funciton: ATP synthase protein I
Locus tag: b3738
Name: atpB
Funciton: ATP synthase A chain (EC 3.6.3.14)
Locus tag: b3737
Name: atpE
Funciton: ATP synthase C chain (EC 3.6.3.14)
Locus tag: b3736
Name: atpF
Funciton: ATP synthase B chain (EC 3.6.3.14)
Locus tag: b3735
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: b3734
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: b3733
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: b3732
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: b3731
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
b3739
atpI
ATP synthase protein I
b3738
atpB
ATP synthase A chain (EC 3.6.3.14)
b3737
atpE
ATP synthase C chain (EC 3.6.3.14)
b3736
atpF
ATP synthase B chain (EC 3.6.3.14)
b3735
atpH
ATP synthase delta chain (EC 3.6.3.14)
b3734
atpA
ATP synthase alpha chain (EC 3.6.3.14)
b3733
atpG
ATP synthase gamma chain (EC 3.6.3.14)
b3732
atpD
ATP synthase beta chain (EC 3.6.3.14)
b3731
atpC
ATP synthase epsilon chain (EC 3.6.3.14)
Position: 10
Score: 3.6
Sequence: ATGTGAAAAAACAA
Locus tag: b0721
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: b0722
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: b0723
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: b0724
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
b0721
sdhC
Succinate dehydrogenase cytochrome b-556 subunit
b0722
sdhD
Succinate dehydrogenase hydrophobic membrane anchor protein
b0723
sdhA
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
b0724
sdhB
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Position: -111
Score: 4.7
Sequence: ATGATAAATATCAA
Position: -73
Score: 5.4
Sequence: TTGATTTACATCAA
Locus tag: b1223
Name: narK
Funciton: Nitrate/nitrite antiporter
b1223
narK
Nitrate/nitrite antiporter
Position: -115
Score: 4.8
Sequence: ATGATTTCAATCAA
Locus tag: b0113
Name: pdhR
Funciton: Pyruvate dehydrogenase complex transcriptional regulator PdhR, GntR family
b0113
pdhR
Pyruvate dehydrogenase complex transcriptional regulator PdhR, GntR family
Position: -131
Score: 4.6
Sequence: ATGTTGTAAATCAA
Locus tag: b0114
Name: aceE
Funciton: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Locus tag: b0115
Name: aceF
Funciton: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
Locus tag: b0116
Name: lpdA
Funciton: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)
b0114
aceE
Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
b0115
aceF
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
b0116
lpdA
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)
Position: -179
Score: 4.1
Sequence: GTGAAATAAATCAA
Locus tag: b0618
Name: citC
Funciton: [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22)
Locus tag: b0617
Name: citD
Funciton: Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)
Locus tag: b0616
Name: citE
Funciton: Citrate lyase beta chain (EC 4.1.3.6)
Locus tag: b0615
Name: citF
Funciton: Citrate lyase alpha chain (EC 4.1.3.6)
Locus tag: b0614
Name: citX
Funciton: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61)
Locus tag: b0613
Name: citG
Funciton: 2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase (EC 2.7.8.25)
b0618
citC
[Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22)
b0617
citD
Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)
b0616
citE
Citrate lyase beta chain (EC 4.1.3.6)
b0615
citF
Citrate lyase alpha chain (EC 4.1.3.6)
b0614
citX
Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61)
b0613
citG
2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase (EC 2.7.8.25)
Position: -95
Score: 4.6
Sequence: TTGACTAAAGTCAA
Locus tag: b2498
Name: upp
Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9)
Locus tag: b2497
Name: uraA2
Funciton: Uracil permease
b2498
upp
Uracil phosphoribosyltransferase (EC 2.4.2.9)
b2497
uraA2
Uracil permease
Position: -72
Score: 5.4
Sequence: TTGATTTACATCAA
Locus tag: b3365
Name: nirB
Funciton: Nitrite reductase, large subunit (EC 1.7.1.4)
Locus tag: b3366
Name: nirD
Funciton: Nitrite reductase, small subunit (EC 1.7.1.4)
Locus tag: b3367
Name: nirC
Funciton: Nitrite transporter
Locus tag: b3368
Name: cysG
Funciton: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
b3365
nirB
Nitrite reductase, large subunit (EC 1.7.1.4)
b3366
nirD
Nitrite reductase, small subunit (EC 1.7.1.4)
b3367
nirC
Nitrite transporter
b3368
cysG
Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Position: -125
Score: 4
Sequence: CTGACCTGAATCAA
Locus tag: b3916
Name: pfkA
Funciton: 6-phosphofructokinase (EC 2.7.1.11)
b3916
pfkA
6-phosphofructokinase (EC 2.7.1.11)
Position: -141
Score: 5.4
Sequence: TTGATATATATCAA
Locus tag: b2503
Name: yfgF
Funciton: Predicted cytochrome C-type biogenesis protein
b2503
yfgF
Predicted cytochrome C-type biogenesis protein
Position: -71
Score: 3.6
Sequence: ATGCGCGAAATCAA
Locus tag: b2241
Name: glpA
Funciton: Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3)
Locus tag: b2242
Name: glpB
Funciton: Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC 1.1.5.3)
Locus tag: b2243
Name: glpC
Funciton: Anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3)
b2241
glpA
Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3)
b2242
glpB
Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC 1.1.5.3)
b2243
glpC
Anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3)
Position: -147
Score: 4.8
Sequence: TTGATATACATCAT
Locus tag: b0780
Name: ybhK
Funciton: Predicted transferase, NAD(P)-binding
b0780
ybhK
Predicted transferase, NAD(P)-binding
Position: -150
Score: 5.2
Sequence: TTGATTAACATCAA
Locus tag: b1109
Name: ndh
Funciton: NADH dehydrogenase (EC 1.6.99.3)
b1109
ndh
NADH dehydrogenase (EC 1.6.99.3)
Position: -25
Score: 4.5
Sequence: TTGTTAAAAAACAA
Locus tag: b4138
Name: dcuA
Funciton: C4-dicarboxylate transporter DcuA
b4138
dcuA
C4-dicarboxylate transporter DcuA
Position: -179
Score: 3.7
Sequence: GTGATACAAATCAC
Locus tag: b1904
Name: yecR
Funciton: putative outer membrane lipoprotein
b1904
yecR
putative outer membrane lipoprotein
Position: -140
Score: 4.6
Sequence: TTGATATTTATCAT
Position: -125
Score: 3.7
Sequence: TTAATAGAAATAAA
Locus tag: b1182
Name: hlyE
Funciton: hemolysin E
b1182
hlyE
hemolysin E
Position: -164
Score: 3.9
Sequence: TTGTTTAACATCCA
Locus tag: b1160
Name: elbA
Funciton: Enhancing lycopene biosynthesis protein 1
b1160
elbA
Enhancing lycopene biosynthesis protein 1
Position: -101
Score: 3.3
Sequence: TTAACATTTGACAA
Locus tag: b1297
Name: puuA
Funciton: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11)
b1297
puuA
Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11)
Position: -340
Score: 4
Sequence: ATGATCTTAATAAA
Position: -75
Score: 3.7
Sequence: ATGAGGAAGGTCAA
Locus tag: b3417
Name: malP
Funciton: Maltodextrin phosphorylase (EC 2.4.1.1)
Locus tag: b3416
Name: malQ
Funciton: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
b3417
malP
Maltodextrin phosphorylase (EC 2.4.1.1)
b3416
malQ
4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
Position: -100
Score: 3.8
Sequence: TTGAATCTTAACAA
Locus tag: b2163
Name: yeiL
Funciton: Predicted N-ribosylNicotinamide CRP-like regulator
b2163
yeiL
Predicted N-ribosylNicotinamide CRP-like regulator
Position: 18
Score: 3.7
Sequence: TTGATGTCGCTCGA
Locus tag: b0827
Name: moeA
Funciton: Molybdopterin biosynthesis protein MoeA
Locus tag: b0826
Name: moeB
Funciton: Molybdopterin biosynthesis protein MoeB
b0827
moeA
Molybdopterin biosynthesis protein MoeA
b0826
moeB
Molybdopterin biosynthesis protein MoeB
Position: -92
Score: 4.1
Sequence: ATGATGTTAATCAT
Locus tag: b2296
Name: ackA
Funciton: Acetate kinase (EC 2.7.2.1)
b2296
ackA
Acetate kinase (EC 2.7.2.1)
Position: -105
Score: 4.7
Sequence: TTGATCGTTATCAA
Locus tag: b1224
Name: narG
Funciton: Respiratory nitrate reductase alpha chain (EC 1.7.99.4)
Locus tag: b1225
Name: narH
Funciton: Respiratory nitrate reductase beta chain (EC 1.7.99.4)
Locus tag: b1226
Name: narJ
Funciton: Respiratory nitrate reductase delta chain (EC 1.7.99.4)
Locus tag: b1227
Name: narI
Funciton: Respiratory nitrate reductase gamma chain (EC 1.7.99.4)
b1224
narG
Respiratory nitrate reductase alpha chain (EC 1.7.99.4)
b1225
narH
Respiratory nitrate reductase beta chain (EC 1.7.99.4)
b1226
narJ
Respiratory nitrate reductase delta chain (EC 1.7.99.4)
b1227
narI
Respiratory nitrate reductase gamma chain (EC 1.7.99.4)
Position: -110
Score: 4.4
Sequence: TTGCGCTAAATCAA
Locus tag: b0873
Name: hcp
Funciton: Hydroxylamine reductase (EC 1.7.-.-)
Locus tag: b0872
Name: hcr
Funciton: NADH oxidoreductase hcr (EC 1.-.-.-)
b0873
hcp
Hydroxylamine reductase (EC 1.7.-.-)
b0872
hcr
NADH oxidoreductase hcr (EC 1.-.-.-)
Position: -53
Score: 3.7
Sequence: TTGCTTCAAAACGA
Locus tag: b0034
Name: caiF
Funciton: Transcriptional activatory protein CaiF
b0034
caiF
Transcriptional activatory protein CaiF
Position: -279
Score: 5.4
Sequence: TTGATGTAAATCAA
Position: -241
Score: 4.6
Sequence: TTGATATTTATCAT
Locus tag: b1222
Name: narX
Funciton: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-)
Locus tag: b1221
Name: narL
Funciton: Nitrate/nitrite response regulator protein NarL, LuxR family
b1222
narX
Nitrate/nitrite sensor protein NarX (EC 2.7.3.-)
b1221
narL
Nitrate/nitrite response regulator protein NarL, LuxR family
Position: -103
Score: 4.7
Sequence: TTGATTTTAATCAG
Locus tag: b0621
Name: dcuC
Funciton: C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1)
b0621
dcuC
C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1)
Position: -86
Score: 4
Sequence: TTGATCCAGAACAG
Locus tag: b3476
Name: nikA
Funciton: Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3)
Locus tag: b3477
Name: nikB
Funciton: Nickel transport system permease protein NikB (TC 3.A.1.5.3)
Locus tag: b3478
Name: nikC
Funciton: Nickel transport system permease protein NikC (TC 3.A.1.5.3)
Locus tag: b3479
Name: nikD
Funciton: Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3)
Locus tag: b3480
Name: nikE
Funciton: Nickel transport ATP-binding protein NikE (TC 3.A.1.5.3)
Locus tag: b3481
Name: nikR
Funciton: Nickel responsive regulator NikR
b3476
nikA
Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3)
b3477
nikB
Nickel transport system permease protein NikB (TC 3.A.1.5.3)
b3478
nikC
Nickel transport system permease protein NikC (TC 3.A.1.5.3)
b3479
nikD
Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3)
b3480
nikE
Nickel transport ATP-binding protein NikE (TC 3.A.1.5.3)
b3481
nikR
Nickel responsive regulator NikR
Position: -75
Score: 4
Sequence: TTGATCCAGGTCAT
Locus tag: b3211
Name: yhcC
Funciton: COG1242: Predicted Fe-S oxidoreductase
b3211
yhcC
COG1242: Predicted Fe-S oxidoreductase
Position: -184
Score: 4.3
Sequence: TTGATACCGAACAA
Locus tag: b0894
Name: dmsA
Funciton: Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-)
Locus tag: b0895
Name: dmsB
Funciton: Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-)
Locus tag: b0896
Name: dmsC
Funciton: Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-)
b0894
dmsA
Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-)
b0895
dmsB
Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-)
b0896
dmsC
Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-)
Position: -74
Score: 4.9
Sequence: ATGATCTATATCAA
Locus tag: b0904
Name: focA
Funciton: Formate efflux transporter (TC 2.A.44 family)
Locus tag: b0903
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
b0904
focA
Formate efflux transporter (TC 2.A.44 family)
b0903
pflB
Pyruvate formate-lyase (EC 2.3.1.54)
Position: -195
Score: 3.5
Sequence: TTGTTATAAGGCAT
Position: 7
Score: 3.5
Sequence: TTAATAGAGATAAA
Locus tag: b1537
Name: ydeJ
Funciton: Competence/damage-inducible protein CinA
b1537
ydeJ
Competence/damage-inducible protein CinA
Position: -203
Score: 3.7
Sequence: TTAATCAAAATTAA
Locus tag: b0040
Name: caiT
Funciton: L-carnitine/gamma-butyrobetaine antiporter
Locus tag: b0039
Name: caiA
Funciton: Crotonobetainyl-CoA dehydrogenase (EC 1.3.99.-)
Locus tag: b0038
Name: caiB
Funciton: Crotonobetainyl-CoA:carnitine CoA-transferase (EC 2.8.3.-)
Locus tag: b0037
Name: caiC
Funciton: Crotonobetaine carnitine-CoA ligase (EC 6.3.2.-)
Locus tag: b0036
Name: caiD
Funciton: Carnitine racemase (EC 5.-.-.-) / Carnitinyl-CoA dehydratase (EC 4.2.1.-)
Locus tag: b0035
Name: caiE
Funciton: possible synthesis of cofactor for carnitine racemase and dehydratase
b0040
caiT
L-carnitine/gamma-butyrobetaine antiporter
b0039
caiA
Crotonobetainyl-CoA dehydrogenase (EC 1.3.99.-)
b0038
caiB
Crotonobetainyl-CoA:carnitine CoA-transferase (EC 2.8.3.-)
b0037
caiC
Crotonobetaine carnitine-CoA ligase (EC 6.3.2.-)
b0036
caiD
Carnitine racemase (EC 5.-.-.-) / Carnitinyl-CoA dehydratase (EC 4.2.1.-)
b0035
caiE
possible synthesis of cofactor for carnitine racemase and dehydratase
Position: -263
Score: 4.9
Sequence: ATGATGTATATCAA
Locus tag: b0781
Name: moaA
Funciton: Molybdenum cofactor biosynthesis protein MoaA
Locus tag: b0782
Name: moaB
Funciton: Molybdenum cofactor biosynthesis protein MoaB
Locus tag: b0783
Name: moaC
Funciton: Molybdenum cofactor biosynthesis protein MoaC
Locus tag: b0784
Name: moaD
Funciton: Molybdenum cofactor biosynthesis protein MoaD
Locus tag: b0785
Name: moaE
Funciton: Molybdenum cofactor biosynthesis protein MoaE
b0781
moaA
Molybdenum cofactor biosynthesis protein MoaA
b0782
moaB
Molybdenum cofactor biosynthesis protein MoaB
b0783
moaC
Molybdenum cofactor biosynthesis protein MoaC
b0784
moaD
Molybdenum cofactor biosynthesis protein MoaD
b0785
moaE
Molybdenum cofactor biosynthesis protein MoaE
Position: -133
Score: 4.4
Sequence: TTGAGGTAGGTCAA
Locus tag: b1474
Name: fdnG
Funciton: Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing
Locus tag: b1475
Name: fdnH
Funciton: Formate dehydrogenase O beta subunit (EC 1.2.1.2)
Locus tag: b1476
Name: fdnI
Funciton: Formate dehydrogenase N gamma subunit (EC 1.2.1.2)
b1474
fdnG
Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing
b1475
fdnH
Formate dehydrogenase O beta subunit (EC 1.2.1.2)
b1476
fdnI
Formate dehydrogenase N gamma subunit (EC 1.2.1.2)
Position: -59
Score: 4.3
Sequence: TTGATGTTAATTAA
Locus tag: b1415
Name: aldA
Funciton: Aldehyde dehydrogenase A (EC 1.2.1.22) / Glycolaldehyde dehydrogenase (EC 1.2.1.21)
b1415
aldA
Aldehyde dehydrogenase A (EC 1.2.1.22) / Glycolaldehyde dehydrogenase (EC 1.2.1.21)
Position: -433
Score: 3.7
Sequence: ATGATGTTAAAAAA
Locus tag: b2288
Name: nuoA
Funciton: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
Locus tag: b2287
Name: nuoB
Funciton: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
Locus tag: b2286
Name: nuoD
Funciton: NADH-ubiquinone oxidoreductase chains C and D (EC 1.6.5.3)
Locus tag: b2285
Name: nuoE
Funciton: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
Locus tag: b2284
Name: nuoF
Funciton: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
Locus tag: b2283
Name: nuoG
Funciton: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
Locus tag: b2282
Name: nuoH
Funciton: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
Locus tag: b2281
Name: nuoI
Funciton: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
Locus tag: b2280
Name: nuoJ
Funciton: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
Locus tag: b2279
Name: nuoK
Funciton: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
Locus tag: b2278
Name: nuoL
Funciton: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
Locus tag: b2277
Name: nuoM
Funciton: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
Locus tag: b2276
Name: nuoN
Funciton: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
b2288
nuoA
NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
b2287
nuoB
NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
b2286
nuoD
NADH-ubiquinone oxidoreductase chains C and D (EC 1.6.5.3)
b2285
nuoE
NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
b2284
nuoF
NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
b2283
nuoG
NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
b2282
nuoH
NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
b2281
nuoI
NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
b2280
nuoJ
NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
b2279
nuoK
NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
b2278
nuoL
NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
b2277
nuoM
NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
b2276
nuoN
NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
Position: -133
Score: 3.7
Sequence: TTGCTTTGCCACAA
Locus tag: b1276
Name: acnA
Funciton: Aconitate hydratase (EC 4.2.1.3); 2-methylisocitrate dehydratase (EC 4.2.1.99)
b1276
acnA
Aconitate hydratase (EC 4.2.1.3); 2-methylisocitrate dehydratase (EC 4.2.1.99)
Position: -116
Score: 3.8
Sequence: TTGAGTGAAATCCA
Locus tag: b3493
Name: pitA
Funciton: Phosphate transporter, low-affinity
b3493
pitA
Phosphate transporter, low-affinity
Position: -106
Score: 4.2
Sequence: TTGATCTAACTCAC
Locus tag: b3092
Name: uxaC
Funciton: Uronate isomerase (EC 5.3.1.12)
Locus tag: b3091
Name: uxaA
Funciton: Altronate hydrolase (EC 4.2.1.7)
b3092
uxaC
Uronate isomerase (EC 5.3.1.12)
b3091
uxaA
Altronate hydrolase (EC 4.2.1.7)
Position: -100
Score: 4.2
Sequence: GCGATCTAAATCAA
Locus tag: b3072
Name: aer
Funciton: Aerotaxis sensor receptor
b3072
aer
Aerotaxis sensor receptor
Position: -71
Score: 4.5
Sequence: TTGTTTAACGTCAA
Locus tag: b2957
Name: ansB
Funciton: L-asparaginase (EC 3.5.1.1)
b2957
ansB
L-asparaginase (EC 3.5.1.1)
Position: -156
Score: 3.9
Sequence: TTGACCTGTATCAG
Locus tag: b3212
Name: gltB
Funciton: Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
Locus tag: b3213
Name: gltD
Funciton: Glutamate synthase [NADPH] small chain (EC 1.4.1.13)
b3212
gltB
Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
b3213
gltD
Glutamate synthase [NADPH] small chain (EC 1.4.1.13)
Position: -249
Score: 4.8
Sequence: TTGAGCTACATCAA
Locus tag: b4238
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: b4237
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
b4238
nrdD
Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
b4237
nrdG
Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
Position: -29
Score: 3.8
Sequence: ATGTTTCATATCAT
Locus tag: b2481
Name: hyfA
Funciton: Hydrogenase-4 component A (EC 1.-.-.-)
Locus tag: b2482
Name: hyfB
Funciton: Hydrogenase-4 component B (EC 1.-.-.-) / Formate hydrogenlyase subunit 3
Locus tag: b2483
Name: hycD
Funciton: Hydrogenase-4 component C (EC 1.-.-.-)
Locus tag: b2484
Name: hyfD
Funciton: Hydrogenase-4 component D (EC 1.-.-.-)
Locus tag: b2485
Name: hyfE
Funciton: Hydrogenase-4 component E (EC 1.-.-.-)
Locus tag: b2486
Name: hyfF
Funciton: Hydrogenase-4 component F (EC 1.-.-.-)
Locus tag: b2487
Name: hyfG
Funciton: Hydrogenase-4 component G (EC 1.-.-.-)
Locus tag: b2488
Name: hyfH
Funciton: Hydrogenase-4 component H (EC 1.-.-.-)
Locus tag: b2489
Name: hyfI
Funciton: Hydrogenase-4 component I (EC 1.-.-.-)
Locus tag: b2490
Name: hyfJ
Funciton: Hydrogenase-4 component J (EC 1.-.-.-)
Locus tag: b2491
Name: hyfR
Funciton: Formate hydrogenlyase transcriptional activator
Locus tag: b2492
Name: focB
Funciton: Formate efflux transporter (TC 2.A.44 family)
b2481
hyfA
Hydrogenase-4 component A (EC 1.-.-.-)
b2482
hyfB
Hydrogenase-4 component B (EC 1.-.-.-) / Formate hydrogenlyase subunit 3
b2483
hycD
Hydrogenase-4 component C (EC 1.-.-.-)
b2484
hyfD
Hydrogenase-4 component D (EC 1.-.-.-)
b2485
hyfE
Hydrogenase-4 component E (EC 1.-.-.-)
b2486
hyfF
Hydrogenase-4 component F (EC 1.-.-.-)
b2487
hyfG
Hydrogenase-4 component G (EC 1.-.-.-)
b2488
hyfH
Hydrogenase-4 component H (EC 1.-.-.-)
b2489
hyfI
Hydrogenase-4 component I (EC 1.-.-.-)
b2490
hyfJ
Hydrogenase-4 component J (EC 1.-.-.-)
b2491
hyfR
Formate hydrogenlyase transcriptional activator
b2492
focB
Formate efflux transporter (TC 2.A.44 family)
Position: -283
Score: 4
Sequence: CCGATAAATATCAA
Locus tag: b4123
Name: dcuB
Funciton: C4-dicarboxylate transporter DcuB
Locus tag: b4122
Name: fumB
Funciton: Fumarate hydratase class I, anaerobic (EC 4.2.1.2)
b4123
dcuB
C4-dicarboxylate transporter DcuB
b4122
fumB
Fumarate hydratase class I, anaerobic (EC 4.2.1.2)
Position: -141
Score: 4.4
Sequence: TTAATTAAGATCAA
Position: -126
Score: 3.8
Sequence: TTGATCTACATCTC
Locus tag: b3942
Name: katG
Funciton: Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7)
b3942
katG
Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7)
Position: -138
Score: 3.8
Sequence: CTTATTTAAATCAG
Locus tag: b3728
Name: pstS
Funciton: Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)
Locus tag: b3727
Name: pstC
Funciton: Phosphate transport system permease protein PstC (TC 3.A.1.7.1)
Locus tag: b3726
Name: pstA
Funciton: Phosphate transport system permease protein PstA (TC 3.A.1.7.1)
Locus tag: b3725
Name: pstB
Funciton: Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)
Locus tag: b3724
Name: phoU
Funciton: Phosphate transport system regulatory protein PhoU
b3728
pstS
Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)
b3727
pstC
Phosphate transport system permease protein PstC (TC 3.A.1.7.1)
b3726
pstA
Phosphate transport system permease protein PstA (TC 3.A.1.7.1)
b3725
pstB
Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)
b3724
phoU
Phosphate transport system regulatory protein PhoU
Position: -214
Score: 4.7
Sequence: TTGATAACGATCAA
Position: -60
Score: 3.7
Sequence: ATGCTTAATATCAG
Locus tag: b1674
Name: ydhY
Funciton: Predicted oxidoreductase, Fe-S subunit
Locus tag: b1673
Name: ydhV
Funciton: Predicted oxidoreductase subunit
Locus tag: b1672
Name: ydhW
Funciton: Predicted oxidoreductase subunit
Locus tag: b1671
Name: ydhX
Funciton: Predicted oxidoreductase, Fe-S subunit
Locus tag: b1670
Name: ydhU
Funciton: Predicted oxidoreductase subunit
Locus tag: b1669
Name: ydhT
Funciton: Predicted oxidoreductase subunit
b1674
ydhY
Predicted oxidoreductase, Fe-S subunit
b1673
ydhV
Predicted oxidoreductase subunit
b1672
ydhW
Predicted oxidoreductase subunit
b1671
ydhX
Predicted oxidoreductase, Fe-S subunit
b1670
ydhU
Predicted oxidoreductase subunit
b1669
ydhT
Predicted oxidoreductase subunit
Position: -89
Score: 3.6
Sequence: TTGCTCTAAAGCAT
Locus tag: b1136
Name: icdA
Funciton: Isocitrate dehydrogenase (EC 1.1.1.42)
b1136
icdA
Isocitrate dehydrogenase (EC 1.1.1.42)
Position: -173
Score: 3.6
Sequence: TTATTCGTCATCAA
Locus tag: b0720
Name: gltA
Funciton: Citrate synthase (EC 2.3.3.1)
b0720
gltA
Citrate synthase (EC 2.3.3.1)
Position: -162
Score: 4.8
Sequence: TTGATTTAAATCAC
Position: -117
Score: 4.1
Sequence: TTAATCCAGATCAA
Locus tag: b1256
Name: ompW
Funciton: outer membrane protein W; colicin S4 receptor; putative transporter
b1256
ompW
outer membrane protein W; colicin S4 receptor; putative transporter
Position: -237
Score: 4.3
Sequence: TTGATTTGGATCAC
Locus tag: b1241
Name: adhE
Funciton: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
b1241
adhE
Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
Position: -311
Score: 3.6
Sequence: TTGAGATTAAATAA
Locus tag: b4125
Name: dcuS
Funciton: Fumarate respiration sensor kinase protein DcuS
b4125
dcuS
Fumarate respiration sensor kinase protein DcuS
Position: -359
Score: 3.7
Sequence: TTGCTGACAATCAT
Position: -150
Score: 4.2
Sequence: TTGATATATAACTA
Locus tag: b0602
Name: ybdN
Funciton: Predicted sulfotransferase
b0602
ybdN
Predicted sulfotransferase
Position: -146
Score: 3.9
Sequence: TTGAACTAACACAA
Position: 22
Score: 3.8
Sequence: TTGATAAAAATGAT
Locus tag: b0897
Name: ycaC
Funciton: Nicotinamidase family protein YcaC
b0897
ycaC
Nicotinamidase family protein YcaC
Position: -278
Score: 3.6
Sequence: GCCATTTAAATCAA
Locus tag: b0937
Name: ssuE
Funciton: FMN reductase (EC 1.5.1.29)
Locus tag: b0936
Name: ssuA
Funciton: Sulfonate ABC transporter, periplasmic sulfonate-binding protein ssuA / Alkanesulfonates-binding protein
Locus tag: b0935
Name: ssuD
Funciton: Alkanesulfonate monooxygenase (EC 1.14.14.5)
Locus tag: b0934
Name: ssuC
Funciton: Alkanesulfonates transport system permease protein
Locus tag: b0933
Name: ssuB
Funciton: Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB
b0937
ssuE
FMN reductase (EC 1.5.1.29)
b0936
ssuA
Sulfonate ABC transporter, periplasmic sulfonate-binding protein ssuA / Alkanesulfonates-binding protein
b0935
ssuD
Alkanesulfonate monooxygenase (EC 1.14.14.5)
b0934
ssuC
Alkanesulfonates transport system permease protein
b0933
ssuB
Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB
Position: -46
Score: 3.2
Sequence: TTGGTCGCTCTCAA
Locus tag: b2208
Name: napF
Funciton: Ferredoxin-type protein NapF (periplasmic nitrate reductase)
Locus tag: b2207
Name: napD
Funciton: Periplasmic nitrate reductase component NapD
Locus tag: b2206
Name: napA
Funciton: Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: b2205
Name: napG
Funciton: Ferredoxin-type protein NapG (periplasmic nitrate reductase)
Locus tag: b2204
Name: napH
Funciton: Polyferredoxin NapH (periplasmic nitrate reductase)
Locus tag: b2203
Name: napB
Funciton: Nitrate reductase cytochrome c550-type subunit
Locus tag: b2202
Name: napC
Funciton: Cytochrome c-type protein NapC
Locus tag: b2201
Name: ccmA
Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: b2200
Name: ccmB
Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: b2199
Name: ccmC
Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: b2198
Name: ccmD
Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: b2197
Name: ccmE
Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: b2196
Name: ccmF
Funciton: Cytochrome c heme lyase subunit CcmF
Locus tag: b2195
Name: ccmG
Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: b2194
Name: ccmH
Funciton: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH
b2208
napF
Ferredoxin-type protein NapF (periplasmic nitrate reductase)
b2207
napD
Periplasmic nitrate reductase component NapD
b2206
napA
Periplasmic nitrate reductase precursor (EC 1.7.99.4)
b2205
napG
Ferredoxin-type protein NapG (periplasmic nitrate reductase)
b2204
napH
Polyferredoxin NapH (periplasmic nitrate reductase)
b2203
napB
Nitrate reductase cytochrome c550-type subunit
b2202
napC
Cytochrome c-type protein NapC
b2201
ccmA
ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
b2200
ccmB
ABC transporter involved in cytochrome c biogenesis, CcmB subunit
b2199
ccmC
Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
b2198
ccmD
Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
b2197
ccmE
Cytochrome c-type biogenesis protein CcmE, heme chaperone
b2196
ccmF
Cytochrome c heme lyase subunit CcmF
b2195
ccmG
Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
b2194
ccmH
Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH
Position: -241
Score: 3.7
Sequence: TTGTTTTATTTCAC
Locus tag: b0432
Name: cyoA
Funciton: Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-)
Locus tag: b0431
Name: cyoB
Funciton: Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-)
Locus tag: b0430
Name: cyoC
Funciton: Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-)
Locus tag: b0429
Name: cyoD
Funciton: Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-)
Locus tag: b0428
Name: cyoE
Funciton: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB
b0432
cyoA
Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-)
b0431
cyoB
Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-)
b0430
cyoC
Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-)
b0429
cyoD
Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-)
b0428
cyoE
Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB
Position: -5
Score: 3.9
Sequence: TTGTTATGACACAA
Locus tag: b4330
Name: yjiH
Funciton: putative inner membrane protein
Locus tag: b4329
Name: yjiG
Funciton: Putative membrane protein
Locus tag: b4328
Name: iadA
Funciton: Isoaspartyl dipeptidase (EC 3.4.19.5) @ Asp-X dipeptidase
Locus tag: b4327
Name: yjiE
Funciton: putative transcriptional regulator, LysR family
b4330
yjiH
putative inner membrane protein
b4329
yjiG
Putative membrane protein
b4328
iadA
Isoaspartyl dipeptidase (EC 3.4.19.5) @ Asp-X dipeptidase
b4327
yjiE
putative transcriptional regulator, LysR family
Position: -121
Score: 3.7
Sequence: TTTATATTCATTAA
Locus tag: b1127
Name: pepT
Funciton: Tripeptide aminopeptidase (EC 3.4.11.4)
b1127
pepT
Tripeptide aminopeptidase (EC 3.4.11.4)
Position: -197
Score: 5.6
Sequence: TTGATTTAAATCAA
Position: -144
Score: 5.1
Sequence: TTGTTTTACATCAA
Locus tag: b2580
Name: ung
Funciton: Uracil-DNA glycosylase (EC 3.2.2.27)
b2580
ung
Uracil-DNA glycosylase (EC 3.2.2.27)
Position: -375
Score: 3.4
Sequence: ATGGCTTCGATCAA
Locus tag: b2029
Name: gnd
Funciton: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
b2029
gnd
6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
Position: -70
Score: 3.4
Sequence: TTGCTTTACATCTC
Locus tag: b4039
Name: ubiC
Funciton: Chorismate--pyruvate lyase (EC 4.1.3.40)
Locus tag: b4040
Name: ubiA
Funciton: 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-)
b4039
ubiC
Chorismate--pyruvate lyase (EC 4.1.3.40)
b4040
ubiA
4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-)
Position: -397
Score: 3.9
Sequence: TTGATCCTGATAAA
Locus tag: b1761
Name: gdhA
Funciton: NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
b1761
gdhA
NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
Position: -82
Score: 3.8
Sequence: TCGCTTTACCTCAA
Locus tag: b4062
Name: soxS
Funciton: AraC-family transcriptional regulator
b4062
soxS
AraC-family transcriptional regulator
Position: -17
Score: 3.4
Sequence: TTGAGGTAAAGCGA
Locus tag: b4063
Name: soxR
Funciton: redox-sensitive transcriptional activator (MerR-family transcriptional regulator)
b4063
soxR
redox-sensitive transcriptional activator (MerR-family transcriptional regulator)
Position: -25
Score: 4.5
Sequence: TTGTTAAAAAACAA
Locus tag: b4138
Name: dcuA
Funciton: Anaerobic C4-dicarboxylate transporter
b4138
dcuA
Anaerobic C4-dicarboxylate transporter
Position: -183
Score: 4.2
Sequence: TTGACAAAAATCAG
Locus tag: b3118
Name: tdcA
Funciton: Threonine catabolism transcriptional regulator TdcA, LysR family
Locus tag: b3117
Name: tdcB
Funciton: Threonine dehydratase, catabolic (EC 4.3.1.19)
Locus tag: b3116
Name: tdcC
Funciton: L-threonine transporter, anaerobically inducible
Locus tag: b3115
Name: tdcD
Funciton: Propionate kinase (EC 2.7.2.15) / Acetate kinase (EC 2.7.2.1)
Locus tag: b3114
Name: tdcE
Funciton: 2-ketobutyrate formate-lyase (EC 2.3.1.-) / Pyruvate formate-lyase (EC 2.3.1.54)
Locus tag: b3113
Name: yhaR
Funciton: Hypothetical protein TdcF in cluster with anaerobic degradation of L-threonine to propionate
Locus tag: b4471
Name: tdcG
Funciton: Predicted L-serine dehydratase (EC 4.3.1.17) TdcG
b3118
tdcA
Threonine catabolism transcriptional regulator TdcA, LysR family
b3117
tdcB
Threonine dehydratase, catabolic (EC 4.3.1.19)
b3116
tdcC
L-threonine transporter, anaerobically inducible
b3115
tdcD
Propionate kinase (EC 2.7.2.15) / Acetate kinase (EC 2.7.2.1)
b3114
tdcE
2-ketobutyrate formate-lyase (EC 2.3.1.-) / Pyruvate formate-lyase (EC 2.3.1.54)
b3113
yhaR
Hypothetical protein TdcF in cluster with anaerobic degradation of L-threonine to propionate
b4471
tdcG
Predicted L-serine dehydratase (EC 4.3.1.17) TdcG
Position: -203
Score: 4.4
Sequence: TTGAGCCACATCAA
Locus tag: b3408
Name: feoA
Funciton: Ferrous iron transport protein A
Locus tag: b3409
Name: feoB
Funciton: Ferrous iron transport protein B
Locus tag: b3410
Name: feoC
Funciton: Ferrous iron-sensisng transcriptional regulator FeoC, FeoC family
b3408
feoA
Ferrous iron transport protein A
b3409
feoB
Ferrous iron transport protein B
b3410
feoC
Ferrous iron-sensisng transcriptional regulator FeoC, FeoC family
Position: -174
Score: 5.1
Sequence: TTGATGTAAAACAA
Position: -121
Score: 5.6
Sequence: TTGATTTAAATCAA
Locus tag: b2579
Name: yfiD
Funciton: Stress-induced alternate pyruvate formate-lyase subunit
b2579
yfiD
Stress-induced alternate pyruvate formate-lyase subunit
Position: -113
Score: 4.1
Sequence: TTGATATGGATTAA
Locus tag: b1587
Name: ynfE
Funciton: Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-)
Locus tag: b1588
Name: ynfF
Funciton: Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-)
Locus tag: b1589
Name: ynfG
Funciton: Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-)
Locus tag: b1590
Name: ynfH
Funciton: Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-)
Locus tag: b1591
Name: ynfI
Funciton: Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD
b1587
ynfE
Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-)
b1588
ynfF
Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-)
b1589
ynfG
Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-)
b1590
ynfH
Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-)
b1591
ynfI
Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD
Position: -33
Score: 4.7
Sequence: TTGACAAATATCAA
Locus tag: b1334
Name: fnr
Funciton: Fumarate and nitrate reduction regulatory protein
b1334
fnr
Fumarate and nitrate reduction regulatory protein
Position: -216
Score: 4.8
Sequence: ATGATTTTTATCAA
Position: -25
Score: 3.7
Sequence: TTGCTAAACGTCAG
Locus tag: b4326
Name: yjiD
Funciton: YjiD protein
b4326
yjiD
YjiD protein
Position: -291
Score: 5.1
Sequence: TTGATATATGTCAA
Locus tag: b4401
Name: arcA
Funciton: Aerobic respiration control protein arcA
b4401
arcA
Aerobic respiration control protein arcA
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