Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing caiC gene

Properties
Regulog: Fnr - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Energy metabolism; Anaerobic metabolism
Effector: Oxygen
Phylum: Gammaproteobacteria
Built upon 685 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -218
Score: 3.67
Sequence: TTGTTTTACATTGA
Locus tag: CKO_03343
Name: null
Funciton: L-carnitine/gamma-butyrobetaine antiporter
Locus tag: CKO_03344
Name: caiA
Funciton: Crotonobetainyl-CoA dehydrogenase (EC 1.3.99.-)
Locus tag: CKO_03345
Name: caiB
Funciton: Crotonobetainyl-CoA:carnitine CoA-transferase (EC 2.8.3.-)
Locus tag: CKO_03346
Name: caiC
Funciton: Crotonobetaine carnitine-CoA ligase (EC 6.3.2.-)
Locus tag: CKO_03347
Name: caiD
Funciton: Carnitine racemase (EC 5.-.-.-) / Carnitinyl-CoA dehydratase (EC 4.2.1.-)
Locus tag: CKO_03348
Name: caiE
Funciton: possible synthesis of cofactor for carnitine racemase and dehydratase
CKO_03343-caiA-caiB-caiC-caiD-caiE -218 3.7 TTGTTTTACATTGA CKO_03343
Edwardsiella tarda EIB202
Position: -230
Score: 3.61
Sequence: TTCATTATAATCAC
Locus tag: ETAE_2664
Name: caiT
Funciton: L-carnitine/gamma-butyrobetaine antiporter
Locus tag: ETAE_2663
Name: caiA
Funciton: Crotonobetainyl-CoA dehydrogenase (EC 1.3.99.-)
Locus tag: ETAE_2662
Name: caiB
Funciton: Crotonobetainyl-CoA:carnitine CoA-transferase (EC 2.8.3.-)
Locus tag: ETAE_2661
Name: caiC
Funciton: Crotonobetaine carnitine-CoA ligase (EC 6.3.2.-)
Locus tag: ETAE_2660
Name: caiD
Funciton: Carnitine racemase (EC 5.-.-.-) / Carnitinyl-CoA dehydratase (EC 4.2.1.-)
caiT-caiA-caiB-caiC-caiD -230 3.6 TTCATTATAATCAC ETAE_2664
Escherichia coli str. K-12 substr. MG1655
Position: -203
Score: 3.66
Sequence: TTAATCAAAATTAA
Locus tag: b0040
Name: caiT
Funciton: L-carnitine/gamma-butyrobetaine antiporter
Locus tag: b0039
Name: caiA
Funciton: Crotonobetainyl-CoA dehydrogenase (EC 1.3.99.-)
Locus tag: b0038
Name: caiB
Funciton: Crotonobetainyl-CoA:carnitine CoA-transferase (EC 2.8.3.-)
Locus tag: b0037
Name: caiC
Funciton: Crotonobetaine carnitine-CoA ligase (EC 6.3.2.-)
Locus tag: b0036
Name: caiD
Funciton: Carnitine racemase (EC 5.-.-.-) / Carnitinyl-CoA dehydratase (EC 4.2.1.-)
Locus tag: b0035
Name: caiE
Funciton: possible synthesis of cofactor for carnitine racemase and dehydratase
caiT-caiA-caiB-caiC-caiD-caiE -203 3.7 TTAATCAAAATTAA b0040
Proteus mirabilis HI4320
Position: -118
Score: 4.17
Sequence: TTGATTATGATAAA
Locus tag: PMI2654
Name: caiT
Funciton: L-carnitine/gamma-butyrobetaine antiporter
Locus tag: PMI2655
Name: caiA
Funciton: Crotonobetainyl-CoA dehydrogenase (EC 1.3.99.-)
Locus tag: PMI2656
Name: caiB
Funciton: Crotonobetainyl-CoA:carnitine CoA-transferase (EC 2.8.3.-)
Locus tag: PMI2657
Name: caiC
Funciton: Crotonobetaine carnitine-CoA ligase (EC 6.3.2.-)
caiT-caiA-caiB-caiC -118 4.2 TTGATTATGATAAA PMI2654