Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing citD gene

Properties
Regulog: Fnr - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Energy metabolism; Anaerobic metabolism
Effector: Oxygen
Phylum: Gammaproteobacteria
Built upon 685 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -184
Score: 4.14
Sequence: GTGAAATAAATCAA
Locus tag: CKO_02541
Name: citC
Funciton: [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22)
Locus tag: CKO_02542
Name: citD
Funciton: Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)
Locus tag: CKO_02543
Name: citE
Funciton: Citrate lyase beta chain (EC 4.1.3.6)
Locus tag: CKO_02544
Name: citF
Funciton: Citrate lyase alpha chain (EC 4.1.3.6)
Locus tag: CKO_02545
Name: citX
Funciton: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61)
Locus tag: CKO_02546
Name: citG
Funciton: 2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase (EC 2.7.8.25)
citC-citD-citE-citF-citX-citG -184 4.1 GTGAAATAAATCAA CKO_02541
Enterobacter sp. 638
Position: 19
Score: 4.1
Sequence: TTTATAAAGGTCAA
Locus tag: Ent638_3376
Name: ycgM
Funciton: Fumarylacetoacetate hydrolase family protein
Locus tag: Ent638_3375
Name: citC
Funciton: [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22)
Locus tag: Ent638_3374
Name: citD
Funciton: Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)
Locus tag: Ent638_3373
Name: citE
Funciton: Citrate lyase beta chain (EC 4.1.3.6)
Locus tag: Ent638_3372
Name: citF
Funciton: Citrate lyase alpha chain (EC 4.1.3.6)
Locus tag: Ent638_3371
Name: citX
Funciton: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61)
Locus tag: Ent638_3370
Name: citG
Funciton: 2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase (EC 2.7.8.25)
ycgM-citC-citD-citE-citF-citX-citG 19 4.1 TTTATAAAGGTCAA Ent638_3376
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -93
Score: 3.8
Sequence: TTGAGCCAAATAAA
Locus tag: ECA2575
Name: ycgM
Funciton: Fumarylacetoacetate hydrolase family protein
Locus tag: ECA2574
Name: citC
Funciton: [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22)
Locus tag: ECA2573
Name: citD
Funciton: Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)
Locus tag: ECA2572
Name: citE
Funciton: Citrate lyase beta chain (EC 4.1.3.6)
Locus tag: ECA2571
Name: citF
Funciton: Citrate lyase alpha chain (EC 4.1.3.6)
Locus tag: ECA2570
Name: citX
Funciton: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61)
Locus tag: ECA2569
Name: citG
Funciton: 2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase (EC 2.7.8.25)
ycgM-citC-citD-citE-citF-citX-citG -93 3.8 TTGAGCCAAATAAA ECA2575
Escherichia coli str. K-12 substr. MG1655
Position: -179
Score: 4.14
Sequence: GTGAAATAAATCAA
Locus tag: b0618
Name: citC
Funciton: [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22)
Locus tag: b0617
Name: citD
Funciton: Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)
Locus tag: b0616
Name: citE
Funciton: Citrate lyase beta chain (EC 4.1.3.6)
Locus tag: b0615
Name: citF
Funciton: Citrate lyase alpha chain (EC 4.1.3.6)
Locus tag: b0614
Name: citX
Funciton: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61)
Locus tag: b0613
Name: citG
Funciton: 2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase (EC 2.7.8.25)
citC-citD-citE-citF-citX-citG -179 4.1 GTGAAATAAATCAA b0618
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -125
Score: 3.61
Sequence: TTAATTAACAACAT
Locus tag: KPN_00034
Name: citC
Funciton: [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22)
Locus tag: KPN_00035
Name: citD
Funciton: Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)
Locus tag: KPN_00036
Name: citE
Funciton: Citrate lyase beta chain (EC 4.1.3.6)
Locus tag: KPN_00037
Name: citF
Funciton: Citrate lyase alpha chain (EC 4.1.3.6)
Locus tag: KPN_00038
Name: citG
Funciton: 2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase (EC 2.7.8.25)
citC-citD-citE-citF-citG -125 3.6 TTAATTAACAACAT KPN_00034
Salmonella typhimurium LT2
Position: -182
Score: 4.14
Sequence: GTGAAATAAATCAA
Locus tag: STM0624
Name: citC
Funciton: [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22)
Locus tag: STM0623
Name: citD
Funciton: Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)
Locus tag: STM0622
Name: citE
Funciton: Citrate lyase beta chain (EC 4.1.3.6)
Locus tag: STM0621
Name: citF
Funciton: Citrate lyase alpha chain (EC 4.1.3.6)
Locus tag: STM0620
Name: citX
Funciton: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61)
Locus tag: STM0619
Name: citG
Funciton: 2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase (EC 2.7.8.25)
citC-citD-citE-citF-citX-citG -182 4.1 GTGAAATAAATCAA STM0624