Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Fnr in Proteus mirabilis HI4320

Properties
Regulator type: Transcription factor
TF locus tag: PMI1203
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Energy metabolism; Anaerobic metabolism
Effector: Oxygen
Regulog: Fnr - Enterobacteriales
Statistics of regulated genes:
- Genes 122
- Operons 50
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 685 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -312
Score: 4.5
Sequence: TTGATGTGGGTCAA
Locus tag: PMI0573
Name: cydA
Funciton: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
Locus tag: PMI0574
Name: cydB
Funciton: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)
PMI0573
cydA
Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
PMI0574
cydB
Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)
Position: -97
Score: 5.1
Sequence: TTGATCAATATCAA
Locus tag: PMI1574
Name: upp
Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9)
Locus tag: PMI1573
Name: uraA2
Funciton: Uracil permease
PMI1574
upp
Uracil phosphoribosyltransferase (EC 2.4.2.9)
PMI1573
uraA2
Uracil permease
Position: -235
Score: 4.5
Sequence: ATGATCTGCATCAA
Locus tag: PMI3569
Name: narX
Funciton: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-)
Locus tag: PMI3568
Name: narL
Funciton: Nitrate/nitrite response regulator protein NarL, LuxR family
PMI3569
narX
Nitrate/nitrite sensor protein NarX (EC 2.7.3.-)
PMI3568
narL
Nitrate/nitrite response regulator protein NarL, LuxR family
Position: -221
Score: 5.1
Sequence: TTGATAAATATCAA
Position: -168
Score: 5.2
Sequence: TTGTTTTAAATCAA
Locus tag: PMI1899
Name: ung
Funciton: Uracil-DNA glycosylase (EC 3.2.2.27)
PMI1899
ung
Uracil-DNA glycosylase (EC 3.2.2.27)
Position: -205
Score: 4.2
Sequence: TTGAGCTAAATCAC
Locus tag: PMI0352
Name: nqrA
Funciton: Na-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-)
Locus tag: PMI0353
Name: nqrB
Funciton: Na-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-)
Locus tag: PMI0354
Name: nqrC
Funciton: Na-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-)
Locus tag: PMI0355
Name: nqrD
Funciton: Na-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-)
Locus tag: PMI0356
Name: nqrE
Funciton: Na-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-)
Locus tag: PMI0357
Name: nqrF
Funciton: Na-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-)
PMI0352
nqrA
Na-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-)
PMI0353
nqrB
Na-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-)
PMI0354
nqrC
Na-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-)
PMI0355
nqrD
Na-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-)
PMI0356
nqrE
Na-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-)
PMI0357
nqrF
Na-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-)
Position: -131
Score: 4.4
Sequence: TTGCGTTAGATCAA
Locus tag: PMI2112
Name: hcp
Funciton: Hydroxylamine reductase (EC 1.7.-.-)
Locus tag: PMI2111
Name: hcr
Funciton: NADH oxidoreductase hcr (EC 1.-.-.-)
PMI2112
hcp
Hydroxylamine reductase (EC 1.7.-.-)
PMI2111
hcr
NADH oxidoreductase hcr (EC 1.-.-.-)
Position: -64
Score: 4.2
Sequence:
Locus tag: PMI2764
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: PMI2763
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
Locus tag: PMI2762
Name: aceK
Funciton: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
PMI2764
aceB
Malate synthase (EC 2.3.3.9)
PMI2763
aceA
Isocitrate lyase (EC 4.1.3.1)
PMI2762
aceK
Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
Position: -2
Score: 4
Sequence: TTGTGAAAAAACAA
Locus tag: PMI0565
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: PMI0566
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: PMI0567
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: PMI0568
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
PMI0565
sdhC
Succinate dehydrogenase cytochrome b-556 subunit
PMI0566
sdhD
Succinate dehydrogenase hydrophobic membrane anchor protein
PMI0567
sdhA
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
PMI0568
sdhB
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Position: -180
Score: 5.2
Sequence: TTGATTTAAAACAA
Position: -127
Score: 5.1
Sequence: TTGATATTTATCAA
Locus tag: PMI1898
Name: yfiD
Funciton: Stress-induced alternate pyruvate formate-lyase subunit
PMI1898
yfiD
Stress-induced alternate pyruvate formate-lyase subunit
Position: 0
Score: 3.8
Sequence: ATGAAATATATCAT
Locus tag: PMI0126
Name: glnK
Funciton: Nitrogen assimilation regulatory protein
Locus tag: PMI0127
Name: amtB
Funciton: Ammonium transporter
PMI0126
glnK
Nitrogen assimilation regulatory protein
PMI0127
amtB
Ammonium transporter
Position: -130
Score: 4
Sequence:
Locus tag: PMI3057
Name: atpI
Funciton: ATP synthase protein I
Locus tag: PMI3058
Name: atpB
Funciton: ATP synthase A chain (EC 3.6.3.14)
Locus tag: PMI3059
Name: atpE
Funciton: ATP synthase C chain (EC 3.6.3.14)
Locus tag: PMI3060
Name: atpF
Funciton: ATP synthase B chain (EC 3.6.3.14)
Locus tag: PMI3061
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: PMI3062
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: PMI3063
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: PMI3064
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: PMI3065
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
PMI3057
atpI
ATP synthase protein I
PMI3058
atpB
ATP synthase A chain (EC 3.6.3.14)
PMI3059
atpE
ATP synthase C chain (EC 3.6.3.14)
PMI3060
atpF
ATP synthase B chain (EC 3.6.3.14)
PMI3061
atpH
ATP synthase delta chain (EC 3.6.3.14)
PMI3062
atpA
ATP synthase alpha chain (EC 3.6.3.14)
PMI3063
atpG
ATP synthase gamma chain (EC 3.6.3.14)
PMI3064
atpD
ATP synthase beta chain (EC 3.6.3.14)
PMI3065
atpC
ATP synthase epsilon chain (EC 3.6.3.14)
Position: -190
Score: 5.2
Sequence: TTGATGTACATCAA
Locus tag: PMI2920
Name: feoA
Funciton: Ferrous iron transport protein A
Locus tag: PMI2921
Name: feoB
Funciton: Ferrous iron transport protein B
Locus tag: PMI2922
Name: feoC
Funciton: Ferrous iron-sensisng transcriptional regulator FeoC, FeoC family
PMI2920
feoA
Ferrous iron transport protein A
PMI2921
feoB
Ferrous iron transport protein B
PMI2922
feoC
Ferrous iron-sensisng transcriptional regulator FeoC, FeoC family
Position: -164
Score: 4.8
Sequence: TTGATGTGGATCAA
Locus tag: PMI1350
Name: ompW
Funciton: outer membrane protein W; colicin S4 receptor; putative transporter
PMI1350
ompW
outer membrane protein W; colicin S4 receptor; putative transporter
Position: -287
Score: 4
Sequence: TTGATAATGAGCAA
Position: -45
Score: 4.9
Sequence: TTGTTTAATATCAA
Locus tag: PMI3591
Name: glpT
Funciton: Glycerol-3-phosphate transporter
Locus tag: PMI3590
Name: glpQ
Funciton: Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46)
PMI3591
glpT
Glycerol-3-phosphate transporter
PMI3590
glpQ
Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46)
Position: -72
Score: 5.1
Sequence: TTGATATTCATCAA
Locus tag: PMI1479
Name: nirB
Funciton: Nitrite reductase, large subunit (EC 1.7.1.4)
Locus tag: PMI1478
Name: nirD
Funciton: Nitrite reductase, small subunit (EC 1.7.1.4)
Locus tag: PMI1477
Name: cysG
Funciton: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
PMI1479
nirB
Nitrite reductase, large subunit (EC 1.7.1.4)
PMI1478
nirD
Nitrite reductase, small subunit (EC 1.7.1.4)
PMI1477
cysG
Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Position: -26
Score: 3.7
Sequence: TTTAATTATCTCAA
Locus tag: PMI2547
Name: dcuA
Funciton: Anaerobic C4-dicarboxylate transporter
PMI2547
dcuA
Anaerobic C4-dicarboxylate transporter
Position: -127
Score: 4.5
Sequence: TTGATATATGTCAT
Locus tag: PMI0652
Name: dcuC
Funciton: C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1)
PMI0652
dcuC
C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1)
Position: -165
Score: 3.7
Sequence: TTGATGATTGGCAA
Locus tag: PMI1771
Name: ackA
Funciton: Acetate kinase (EC 2.7.2.1)
PMI1771
ackA
Acetate kinase (EC 2.7.2.1)
Position: -242
Score: 3.8
Sequence: GTGATGTAGATCAC
Locus tag: PMI1486
Name: adhE
Funciton: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
PMI1486
adhE
Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
Position: -107
Score: 4.2
Sequence: TTGCTCATTATCAA
Locus tag: PMI3592
Name: glpA
Funciton: Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3)
Locus tag: PMI3593
Name: glpB
Funciton: Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC 1.1.5.3)
Locus tag: PMI3594
Name: glpC
Funciton: Anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3)
PMI3592
glpA
Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3)
PMI3593
glpB
Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC 1.1.5.3)
PMI3594
glpC
Anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3)
Position: -19
Score: 3.5
Sequence: TCGAGGTGAAACAA
Locus tag: PMI0374
Name: ydeJ
Funciton: Competence/damage-inducible protein CinA
PMI0374
ydeJ
Competence/damage-inducible protein CinA
Position: -313
Score: 4
Sequence: TTGTTGTTTATAAA
Locus tag: PMI2660
Name: caiF
Funciton: Transcriptional activatory protein CaiF
PMI2660
caiF
Transcriptional activatory protein CaiF
Position: -208
Score: 4
Sequence:
Locus tag: PMI3588
Name: frdA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: PMI3587
Name: frdB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: PMI3586
Name: frdC
Funciton: Fumarate reductase subunit C
Locus tag: PMI3585
Name: frdD
Funciton: Fumarate reductase subunit D
PMI3588
frdA
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
PMI3587
frdB
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
PMI3586
frdC
Fumarate reductase subunit C
PMI3585
frdD
Fumarate reductase subunit D
Position: -148
Score: 5
Sequence: TTGATATTGATCAA
Locus tag: PMI1575
Name: purM
Funciton: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)
Locus tag: PMI1576
Name: purN
Funciton: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)
PMI1575
purM
Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)
PMI1576
purN
Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)
Position: -118
Score: 4.2
Sequence: TTGATTATGATAAA
Locus tag: PMI2654
Name: caiT
Funciton: L-carnitine/gamma-butyrobetaine antiporter
Locus tag: PMI2655
Name: caiA
Funciton: Crotonobetainyl-CoA dehydrogenase (EC 1.3.99.-)
Locus tag: PMI2656
Name: caiB
Funciton: Crotonobetainyl-CoA:carnitine CoA-transferase (EC 2.8.3.-)
Locus tag: PMI2657
Name: caiC
Funciton: Crotonobetaine carnitine-CoA ligase (EC 6.3.2.-)
PMI2654
caiT
L-carnitine/gamma-butyrobetaine antiporter
PMI2655
caiA
Crotonobetainyl-CoA dehydrogenase (EC 1.3.99.-)
PMI2656
caiB
Crotonobetainyl-CoA:carnitine CoA-transferase (EC 2.8.3.-)
PMI2657
caiC
Crotonobetaine carnitine-CoA ligase (EC 6.3.2.-)
Position: -73
Score: 4.3
Sequence:
Locus tag: PMI3570
Name: narK
Funciton: Nitrate/nitrite antiporter
Locus tag: PMI3571
Name: narG
Funciton: Respiratory nitrate reductase alpha chain (EC 1.7.99.4)
Locus tag: PMI3572
Name: narH
Funciton: Respiratory nitrate reductase beta chain (EC 1.7.99.4)
Locus tag: PMI3573
Name: narJ
Funciton: Respiratory nitrate reductase delta chain (EC 1.7.99.4)
Locus tag: PMI3574
Name: narI
Funciton: Respiratory nitrate reductase gamma chain (EC 1.7.99.4)
PMI3570
narK
Nitrate/nitrite antiporter
PMI3571
narG
Respiratory nitrate reductase alpha chain (EC 1.7.99.4)
PMI3572
narH
Respiratory nitrate reductase beta chain (EC 1.7.99.4)
PMI3573
narJ
Respiratory nitrate reductase delta chain (EC 1.7.99.4)
PMI3574
narI
Respiratory nitrate reductase gamma chain (EC 1.7.99.4)
Position: -353
Score: 3.7
Sequence: TTATCTAACATCAA
Position: -252
Score: 4.1
Sequence: TTTTTATTTATCAA
Locus tag: PMI3677
Name: gltB
Funciton: Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
Locus tag: PMI3676
Name: gltD
Funciton: Glutamate synthase [NADPH] small chain (EC 1.4.1.13)
PMI3677
gltB
Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
PMI3676
gltD
Glutamate synthase [NADPH] small chain (EC 1.4.1.13)
Position: -78
Score: 3.4
Sequence: TTGTTTTTTTGCAA
Locus tag: PMI0389
Name: dcuB
Funciton: C4-dicarboxylate transporter DcuB
PMI0389
dcuB
C4-dicarboxylate transporter DcuB
Position: -92
Score: 3.7
Sequence: TTTATATACAACGA
Locus tag: PMI0070
Name: ydhY
Funciton: Predicted oxidoreductase, Fe-S subunit
Locus tag: PMI0069
Name: ydhV
Funciton: Predicted oxidoreductase subunit
Locus tag: PMI0068
Name: ydhW
Funciton: Predicted oxidoreductase subunit
Locus tag: PMI0067
Name: ydhX
Funciton: Predicted oxidoreductase, Fe-S subunit
Locus tag: PMI0066
Name: ydhU
Funciton: Predicted oxidoreductase subunit
Locus tag: PMI0065
Name: ydhT
Funciton: Predicted oxidoreductase subunit
PMI0070
ydhY
Predicted oxidoreductase, Fe-S subunit
PMI0069
ydhV
Predicted oxidoreductase subunit
PMI0068
ydhW
Predicted oxidoreductase subunit
PMI0067
ydhX
Predicted oxidoreductase, Fe-S subunit
PMI0066
ydhU
Predicted oxidoreductase subunit
PMI0065
ydhT
Predicted oxidoreductase subunit
Position: -37
Score: 3.8
Sequence: TTGAGATATCTCAT
Locus tag: PMI2813
Name: aer
Funciton: Aerotaxis sensor receptor
PMI2813
aer
Aerotaxis sensor receptor
Position: -139
Score: 4.2
Sequence: TTGATTTTAAATAA
Locus tag: PMI0708
Name: ansB
Funciton: L-asparaginase (EC 3.5.1.1)
PMI0708
ansB
L-asparaginase (EC 3.5.1.1)
Position: -46
Score: 4
Sequence: TTGATAGATGTCGA
Locus tag: PMI2893
Name: pstS
Funciton: Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)
Locus tag: PMI2894
Name: pstC
Funciton: Phosphate transport system permease protein PstC (TC 3.A.1.7.1)
Locus tag: PMI2895
Name: pstA
Funciton: Phosphate transport system permease protein PstA (TC 3.A.1.7.1)
Locus tag: PMI2896
Name: pstB
Funciton: Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)
Locus tag: PMI2897
Name: phoU
Funciton: Phosphate transport system regulatory protein PhoU
PMI2893
pstS
Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)
PMI2894
pstC
Phosphate transport system permease protein PstC (TC 3.A.1.7.1)
PMI2895
pstA
Phosphate transport system permease protein PstA (TC 3.A.1.7.1)
PMI2896
pstB
Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)
PMI2897
phoU
Phosphate transport system regulatory protein PhoU
Position: -245
Score: 4
Sequence: ATGTGTTTAATCAA
Position: -134
Score: 4.2
Sequence: ATGATTTCGCTCAA
Locus tag: PMI2047
Name: pdhR
Funciton: Pyruvate dehydrogenase complex transcriptional regulator PdhR, GntR family
Locus tag: PMI2046
Name: aceE
Funciton: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Locus tag: PMI2045
Name: aceF
Funciton: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
Locus tag: PMI2044
Name: lpdA
Funciton: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)
PMI2047
pdhR
Pyruvate dehydrogenase complex transcriptional regulator PdhR, GntR family
PMI2046
aceE
Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
PMI2045
aceF
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
PMI2044
lpdA
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)
Position: -184
Score: 4.9
Sequence: TTGATTTAGATCAG
Locus tag: PMI3451
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: PMI3450
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
PMI3451
nrdD
Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
PMI3450
nrdG
Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
Position: -153
Score: 5.5
Sequence: TTGATATAAATCAA
Locus tag: PMI0875
Name: ndh
Funciton: NADH dehydrogenase (EC 1.6.99.3)
PMI0875
ndh
NADH dehydrogenase (EC 1.6.99.3)
Position: -159
Score: 4.1
Sequence: TTATTATTAATCAA
Position: -85
Score: 4.5
Sequence: ATGATCCATATCAA
Locus tag: PMI0706
Name: focA
Funciton: Formate efflux transporter (TC 2.A.44 family)
Locus tag: PMI0705
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
PMI0706
focA
Formate efflux transporter (TC 2.A.44 family)
PMI0705
pflB
Pyruvate formate-lyase (EC 2.3.1.54)
Position: -114
Score: 4.9
Sequence: TTGATTTTTAACAA
Locus tag: PMI2528
Name: hyfA
Funciton: Hydrogenase-4 component A (EC 1.-.-.-)
Locus tag: PMI2527
Name: hyfB
Funciton: Hydrogenase-4 component B (EC 1.-.-.-) / Formate hydrogenlyase subunit 3
Locus tag: PMI2526
Name: hycD
Funciton: Hydrogenase-4 component C (EC 1.-.-.-)
Locus tag: PMI2525
Name: hyfD
Funciton: Hydrogenase-4 component D (EC 1.-.-.-)
Locus tag: PMI2524
Name: hyfE
Funciton: Hydrogenase-4 component E (EC 1.-.-.-)
Locus tag: PMI2523
Name: hyfF
Funciton: Hydrogenase-4 component F (EC 1.-.-.-)
Locus tag: PMI2522
Name: hyfG
Funciton: Hydrogenase-4 component G (EC 1.-.-.-)
Locus tag: PMI2521
Name: hyfH
Funciton: Hydrogenase-4 component H (EC 1.-.-.-)
Locus tag: PMI2520
Name: hyfI
Funciton: Hydrogenase-4 component I (EC 1.-.-.-)
Locus tag: PMI2519
Name: hyfJ
Funciton: Hydrogenase-4 component J (EC 1.-.-.-)
PMI2528
hyfA
Hydrogenase-4 component A (EC 1.-.-.-)
PMI2527
hyfB
Hydrogenase-4 component B (EC 1.-.-.-) / Formate hydrogenlyase subunit 3
PMI2526
hycD
Hydrogenase-4 component C (EC 1.-.-.-)
PMI2525
hyfD
Hydrogenase-4 component D (EC 1.-.-.-)
PMI2524
hyfE
Hydrogenase-4 component E (EC 1.-.-.-)
PMI2523
hyfF
Hydrogenase-4 component F (EC 1.-.-.-)
PMI2522
hyfG
Hydrogenase-4 component G (EC 1.-.-.-)
PMI2521
hyfH
Hydrogenase-4 component H (EC 1.-.-.-)
PMI2520
hyfI
Hydrogenase-4 component I (EC 1.-.-.-)
PMI2519
hyfJ
Hydrogenase-4 component J (EC 1.-.-.-)
Position: -92
Score: 3.7
Sequence: TTGATTTAATTAAT
Locus tag: PMI0882
Name: pepT
Funciton: Tripeptide aminopeptidase (EC 3.4.11.4)
PMI0882
pepT
Tripeptide aminopeptidase (EC 3.4.11.4)
Position: -202
Score: 3.7
Sequence: ATGAGATAGATCAC
Locus tag: PMI2546
Name: aspA
Funciton: Aspartate ammonia-lyase (EC 4.3.1.1)
Locus tag: PMI2547
Name: dcuA
Funciton: C4-dicarboxylate transporter DcuA
PMI2546
aspA
Aspartate ammonia-lyase (EC 4.3.1.1)
PMI2547
dcuA
C4-dicarboxylate transporter DcuA
Position: 9
Score: 3.6
Sequence: ATGAAATACATAAA
Locus tag: PMI0108
Name: cyoA
Funciton: Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-)
Locus tag: PMI0107
Name: cyoB
Funciton: Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-)
Locus tag: PMI0106
Name: cyoC
Funciton: Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-)
Locus tag: PMI0105A
Name: cyoD
Funciton: Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-)
Locus tag: PMI0105
Name: cyoE
Funciton: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB
PMI0108
cyoA
Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-)
PMI0107
cyoB
Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-)
PMI0106
cyoC
Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-)
PMI0105A
cyoD
Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-)
PMI0105
cyoE
Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB
Position: -182
Score: 3.7
Sequence: TTAAAATACAACAA
Locus tag: PMI0637
Name: moeA
Funciton: Molybdopterin biosynthesis protein MoeA
Locus tag: PMI0636
Name: moeB
Funciton: Molybdopterin biosynthesis protein MoeB
PMI0637
moeA
Molybdopterin biosynthesis protein MoeA
PMI0636
moeB
Molybdopterin biosynthesis protein MoeB
Position: -194
Score: 3.7
Sequence: TTAATGCGCATCAA
Locus tag: PMI3203
Name: pfkA
Funciton: 6-phosphofructokinase (EC 2.7.1.11)
PMI3203
pfkA
6-phosphofructokinase (EC 2.7.1.11)
Position: -64
Score: 3.9
Sequence: TTGATATAAATTTA
Locus tag: PMI3580
Name: hyfR
Funciton: Formate hydrogenlyase transcriptional activator
PMI3580
hyfR
Formate hydrogenlyase transcriptional activator
Position: -176
Score: 3.6
Sequence: TTTAGTGAGGTCAA
Locus tag: PMI3008
Name: gdhA
Funciton: NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
PMI3008
gdhA
NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
Position: -164
Score: 3.8
Sequence: TTTATTTAAAATAA
Position: -85
Score: 4
Sequence: ATGATTTTCATTAA
Locus tag: PMI3036
Name: sodA
Funciton: Manganese superoxide dismutase (EC 1.15.1.1)
PMI3036
sodA
Manganese superoxide dismutase (EC 1.15.1.1)
Position: -343
Score: 4
Sequence: ATTACATAAATCAA
Position: -282
Score: 4.6
Sequence: TTGATATGTGTCAA
Locus tag: PMI3719
Name: arcA
Funciton: Aerobic respiration control protein arcA
PMI3719
arcA
Aerobic respiration control protein arcA
Position: -163
Score: 4.3
Sequence: TTGTTTTTTCTCAA
Locus tag: PMI2753
Name: ubiC
Funciton: Chorismate--pyruvate lyase (EC 4.1.3.40)
Locus tag: PMI2752
Name: ubiA
Funciton: 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-)
PMI2753
ubiC
Chorismate--pyruvate lyase (EC 4.1.3.40)
PMI2752
ubiA
4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-)
Position: -7
Score: 3.7
Sequence: TTATTTCATGTCAA
Locus tag: PMI0655
Name: gnd
Funciton: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
PMI0655
gnd
6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
Position: -69
Score: 3.4
Sequence: TTGTATTGGGACAA
Position: 16
Score: 3.7
Sequence: TAGATTTTAATCGA
Locus tag: PMI2705
Name: soxR
Funciton: redox-sensitive transcriptional activator (MerR-family transcriptional regulator)
PMI2705
soxR
redox-sensitive transcriptional activator (MerR-family transcriptional regulator)
Position: -40
Score: 4.5
Sequence: TTGACACATATCAA
Locus tag: PMI1203
Name: fnr
Funciton: Fumarate and nitrate reduction regulatory protein
PMI1203
fnr
Fumarate and nitrate reduction regulatory protein
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