Regulon of Fnr in Proteus mirabilis HI4320
| Regulator type: | Transcription factor |
| TF locus tag: | PMI1203 |
| Regulator family: | CRP |
| Regulation mode: | activator (repressor) |
| Biological process: | Energy metabolism; Anaerobic metabolism |
| Effector: | Oxygen |
| Regulog: | Fnr - Enterobacteriales |
| Statistics of regulated genes: | |
| - Genes | 122 |
| - Operons | 50 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By TF family - CRP
- By effector - Oxygen
- By pathway - Energy metabolism
- By pathway - Anaerobic metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -312
Score: 4.5 Sequence: TTGATGTGGGTCAA
Locus tag: PMI0573
Name: cydA Funciton: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
Locus tag: PMI0574
Name: cydB Funciton: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) |
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cydA
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Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
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cydB
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Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)
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Position: -97
Score: 5.1 Sequence: TTGATCAATATCAA
Locus tag: PMI1574
Name: upp Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9)
Locus tag: PMI1573
Name: uraA2 Funciton: Uracil permease |
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upp
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Uracil phosphoribosyltransferase (EC 2.4.2.9)
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uraA2
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Uracil permease
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Position: -235
Score: 4.5 Sequence: ATGATCTGCATCAA
Locus tag: PMI3569
Name: narX Funciton: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-)
Locus tag: PMI3568
Name: narL Funciton: Nitrate/nitrite response regulator protein NarL, LuxR family |
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narX
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Nitrate/nitrite sensor protein NarX (EC 2.7.3.-)
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narL
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Nitrate/nitrite response regulator protein NarL, LuxR family
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Position: -221
Score: 5.1 Sequence: TTGATAAATATCAA
Position: -168
Score: 5.2 Sequence: TTGTTTTAAATCAA
Locus tag: PMI1899
Name: ung Funciton: Uracil-DNA glycosylase (EC 3.2.2.27) |
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ung
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Uracil-DNA glycosylase (EC 3.2.2.27)
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Position: -205
Score: 4.2 Sequence: TTGAGCTAAATCAC
Locus tag: PMI0352
Name: nqrA Funciton: Na-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-)
Locus tag: PMI0353
Name: nqrB Funciton: Na-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-)
Locus tag: PMI0354
Name: nqrC Funciton: Na-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-)
Locus tag: PMI0355
Name: nqrD Funciton: Na-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-)
Locus tag: PMI0356
Name: nqrE Funciton: Na-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-)
Locus tag: PMI0357
Name: nqrF Funciton: Na-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-) |
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nqrA
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Na-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-)
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nqrB
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Na-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-)
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nqrC
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Na-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-)
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nqrD
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Na-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-)
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nqrE
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Na-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-)
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nqrF
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Na-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-)
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Position: -131
Score: 4.4 Sequence: TTGCGTTAGATCAA
Locus tag: PMI2112
Name: hcp Funciton: Hydroxylamine reductase (EC 1.7.-.-)
Locus tag: PMI2111
Name: hcr Funciton: NADH oxidoreductase hcr (EC 1.-.-.-) |
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hcp
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Hydroxylamine reductase (EC 1.7.-.-)
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hcr
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NADH oxidoreductase hcr (EC 1.-.-.-)
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Position: -64
Score: 4.2 Sequence:
Locus tag: PMI2764
Name: aceB Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: PMI2763
Name: aceA Funciton: Isocitrate lyase (EC 4.1.3.1)
Locus tag: PMI2762
Name: aceK Funciton: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-) |
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aceB
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Malate synthase (EC 2.3.3.9)
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aceA
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Isocitrate lyase (EC 4.1.3.1)
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aceK
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Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
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Position: -2
Score: 4 Sequence: TTGTGAAAAAACAA
Locus tag: PMI0565
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: PMI0566
Name: sdhD Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: PMI0567
Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: PMI0568
Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
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sdhC
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Succinate dehydrogenase cytochrome b-556 subunit
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sdhD
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Succinate dehydrogenase hydrophobic membrane anchor protein
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sdhA
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Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
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sdhB
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Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
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Position: -180
Score: 5.2 Sequence: TTGATTTAAAACAA
Position: -127
Score: 5.1 Sequence: TTGATATTTATCAA
Locus tag: PMI1898
Name: yfiD Funciton: Stress-induced alternate pyruvate formate-lyase subunit |
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yfiD
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Stress-induced alternate pyruvate formate-lyase subunit
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Position: 0
Score: 3.8 Sequence: ATGAAATATATCAT
Locus tag: PMI0126
Name: glnK Funciton: Nitrogen assimilation regulatory protein
Locus tag: PMI0127
Name: amtB Funciton: Ammonium transporter |
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glnK
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Nitrogen assimilation regulatory protein
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amtB
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Ammonium transporter
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Position: -130
Score: 4 Sequence:
Locus tag: PMI3057
Name: atpI Funciton: ATP synthase protein I
Locus tag: PMI3058
Name: atpB Funciton: ATP synthase A chain (EC 3.6.3.14)
Locus tag: PMI3059
Name: atpE Funciton: ATP synthase C chain (EC 3.6.3.14)
Locus tag: PMI3060
Name: atpF Funciton: ATP synthase B chain (EC 3.6.3.14)
Locus tag: PMI3061
Name: atpH Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: PMI3062
Name: atpA Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: PMI3063
Name: atpG Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: PMI3064
Name: atpD Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: PMI3065
Name: atpC Funciton: ATP synthase epsilon chain (EC 3.6.3.14) |
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atpI
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ATP synthase protein I
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atpB
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ATP synthase A chain (EC 3.6.3.14)
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atpE
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ATP synthase C chain (EC 3.6.3.14)
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atpF
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ATP synthase B chain (EC 3.6.3.14)
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atpH
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ATP synthase delta chain (EC 3.6.3.14)
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atpA
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ATP synthase alpha chain (EC 3.6.3.14)
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atpG
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ATP synthase gamma chain (EC 3.6.3.14)
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atpD
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ATP synthase beta chain (EC 3.6.3.14)
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atpC
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ATP synthase epsilon chain (EC 3.6.3.14)
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Position: -190
Score: 5.2 Sequence: TTGATGTACATCAA
Locus tag: PMI2920
Name: feoA Funciton: Ferrous iron transport protein A
Locus tag: PMI2921
Name: feoB Funciton: Ferrous iron transport protein B
Locus tag: PMI2922
Name: feoC Funciton: Ferrous iron-sensisng transcriptional regulator FeoC, FeoC family |
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feoA
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Ferrous iron transport protein A
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feoB
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Ferrous iron transport protein B
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feoC
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Ferrous iron-sensisng transcriptional regulator FeoC, FeoC family
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Position: -164
Score: 4.8 Sequence: TTGATGTGGATCAA
Locus tag: PMI1350
Name: ompW Funciton: outer membrane protein W; colicin S4 receptor; putative transporter |
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ompW
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outer membrane protein W; colicin S4 receptor; putative transporter
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Position: -287
Score: 4 Sequence: TTGATAATGAGCAA
Position: -45
Score: 4.9 Sequence: TTGTTTAATATCAA
Locus tag: PMI3591
Name: glpT Funciton: Glycerol-3-phosphate transporter
Locus tag: PMI3590
Name: glpQ Funciton: Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) |
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glpT
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Glycerol-3-phosphate transporter
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glpQ
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Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46)
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Position: -72
Score: 5.1 Sequence: TTGATATTCATCAA
Locus tag: PMI1479
Name: nirB Funciton: Nitrite reductase, large subunit (EC 1.7.1.4)
Locus tag: PMI1478
Name: nirD Funciton: Nitrite reductase, small subunit (EC 1.7.1.4)
Locus tag: PMI1477
Name: cysG Funciton: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
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nirB
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Nitrite reductase, large subunit (EC 1.7.1.4)
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nirD
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Nitrite reductase, small subunit (EC 1.7.1.4)
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cysG
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Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
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Position: -26
Score: 3.7 Sequence: TTTAATTATCTCAA
Locus tag: PMI2547
Name: dcuA Funciton: Anaerobic C4-dicarboxylate transporter |
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dcuA
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Anaerobic C4-dicarboxylate transporter
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Position: -127
Score: 4.5 Sequence: TTGATATATGTCAT
Locus tag: PMI0652
Name: dcuC Funciton: C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) |
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dcuC
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C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1)
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Position: -165
Score: 3.7 Sequence: TTGATGATTGGCAA
Locus tag: PMI1771
Name: ackA Funciton: Acetate kinase (EC 2.7.2.1) |
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ackA
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Acetate kinase (EC 2.7.2.1)
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Position: -242
Score: 3.8 Sequence: GTGATGTAGATCAC
Locus tag: PMI1486
Name: adhE Funciton: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
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adhE
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Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
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Position: -107
Score: 4.2 Sequence: TTGCTCATTATCAA
Locus tag: PMI3592
Name: glpA Funciton: Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3)
Locus tag: PMI3593
Name: glpB Funciton: Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC 1.1.5.3)
Locus tag: PMI3594
Name: glpC Funciton: Anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3) |
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glpA
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Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3)
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glpB
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Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC 1.1.5.3)
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glpC
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Anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3)
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Position: -19
Score: 3.5 Sequence: TCGAGGTGAAACAA
Locus tag: PMI0374
Name: ydeJ Funciton: Competence/damage-inducible protein CinA |
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ydeJ
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Competence/damage-inducible protein CinA
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Position: -313
Score: 4 Sequence: TTGTTGTTTATAAA
Locus tag: PMI2660
Name: caiF Funciton: Transcriptional activatory protein CaiF |
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caiF
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Transcriptional activatory protein CaiF
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Position: -208
Score: 4 Sequence:
Locus tag: PMI3588
Name: frdA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: PMI3587
Name: frdB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: PMI3586
Name: frdC Funciton: Fumarate reductase subunit C
Locus tag: PMI3585
Name: frdD Funciton: Fumarate reductase subunit D |
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frdA
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Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
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frdB
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Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
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frdC
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Fumarate reductase subunit C
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frdD
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Fumarate reductase subunit D
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Position: -148
Score: 5 Sequence: TTGATATTGATCAA
Locus tag: PMI1575
Name: purM Funciton: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)
Locus tag: PMI1576
Name: purN Funciton: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) |
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purM
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Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)
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purN
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Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)
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Position: -118
Score: 4.2 Sequence: TTGATTATGATAAA
Locus tag: PMI2654
Name: caiT Funciton: L-carnitine/gamma-butyrobetaine antiporter
Locus tag: PMI2655
Name: caiA Funciton: Crotonobetainyl-CoA dehydrogenase (EC 1.3.99.-)
Locus tag: PMI2656
Name: caiB Funciton: Crotonobetainyl-CoA:carnitine CoA-transferase (EC 2.8.3.-)
Locus tag: PMI2657
Name: caiC Funciton: Crotonobetaine carnitine-CoA ligase (EC 6.3.2.-) |
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caiT
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L-carnitine/gamma-butyrobetaine antiporter
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caiA
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Crotonobetainyl-CoA dehydrogenase (EC 1.3.99.-)
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caiB
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Crotonobetainyl-CoA:carnitine CoA-transferase (EC 2.8.3.-)
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caiC
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Crotonobetaine carnitine-CoA ligase (EC 6.3.2.-)
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Position: -73
Score: 4.3 Sequence:
Locus tag: PMI3570
Name: narK Funciton: Nitrate/nitrite antiporter
Locus tag: PMI3571
Name: narG Funciton: Respiratory nitrate reductase alpha chain (EC 1.7.99.4)
Locus tag: PMI3572
Name: narH Funciton: Respiratory nitrate reductase beta chain (EC 1.7.99.4)
Locus tag: PMI3573
Name: narJ Funciton: Respiratory nitrate reductase delta chain (EC 1.7.99.4)
Locus tag: PMI3574
Name: narI Funciton: Respiratory nitrate reductase gamma chain (EC 1.7.99.4) |
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narK
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Nitrate/nitrite antiporter
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narG
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Respiratory nitrate reductase alpha chain (EC 1.7.99.4)
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narH
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Respiratory nitrate reductase beta chain (EC 1.7.99.4)
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narJ
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Respiratory nitrate reductase delta chain (EC 1.7.99.4)
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narI
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Respiratory nitrate reductase gamma chain (EC 1.7.99.4)
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Position: -353
Score: 3.7 Sequence: TTATCTAACATCAA
Position: -252
Score: 4.1 Sequence: TTTTTATTTATCAA
Locus tag: PMI3677
Name: gltB Funciton: Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
Locus tag: PMI3676
Name: gltD Funciton: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
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gltB
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Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
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gltD
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Glutamate synthase [NADPH] small chain (EC 1.4.1.13)
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Position: -78
Score: 3.4 Sequence: TTGTTTTTTTGCAA
Locus tag: PMI0389
Name: dcuB Funciton: C4-dicarboxylate transporter DcuB |
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dcuB
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C4-dicarboxylate transporter DcuB
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Position: -92
Score: 3.7 Sequence: TTTATATACAACGA
Locus tag: PMI0070
Name: ydhY Funciton: Predicted oxidoreductase, Fe-S subunit
Locus tag: PMI0069
Name: ydhV Funciton: Predicted oxidoreductase subunit
Locus tag: PMI0068
Name: ydhW Funciton: Predicted oxidoreductase subunit
Locus tag: PMI0067
Name: ydhX Funciton: Predicted oxidoreductase, Fe-S subunit
Locus tag: PMI0066
Name: ydhU Funciton: Predicted oxidoreductase subunit
Locus tag: PMI0065
Name: ydhT Funciton: Predicted oxidoreductase subunit |
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ydhY
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Predicted oxidoreductase, Fe-S subunit
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ydhV
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Predicted oxidoreductase subunit
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ydhW
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Predicted oxidoreductase subunit
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ydhX
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Predicted oxidoreductase, Fe-S subunit
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ydhU
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Predicted oxidoreductase subunit
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ydhT
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Predicted oxidoreductase subunit
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Position: -37
Score: 3.8 Sequence: TTGAGATATCTCAT
Locus tag: PMI2813
Name: aer Funciton: Aerotaxis sensor receptor |
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aer
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Aerotaxis sensor receptor
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Position: -139
Score: 4.2 Sequence: TTGATTTTAAATAA
Locus tag: PMI0708
Name: ansB Funciton: L-asparaginase (EC 3.5.1.1) |
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ansB
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L-asparaginase (EC 3.5.1.1)
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Position: -46
Score: 4 Sequence: TTGATAGATGTCGA
Locus tag: PMI2893
Name: pstS Funciton: Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)
Locus tag: PMI2894
Name: pstC Funciton: Phosphate transport system permease protein PstC (TC 3.A.1.7.1)
Locus tag: PMI2895
Name: pstA Funciton: Phosphate transport system permease protein PstA (TC 3.A.1.7.1)
Locus tag: PMI2896
Name: pstB Funciton: Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)
Locus tag: PMI2897
Name: phoU Funciton: Phosphate transport system regulatory protein PhoU |
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pstS
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Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)
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pstC
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Phosphate transport system permease protein PstC (TC 3.A.1.7.1)
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pstA
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Phosphate transport system permease protein PstA (TC 3.A.1.7.1)
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pstB
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Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)
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phoU
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Phosphate transport system regulatory protein PhoU
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Position: -245
Score: 4 Sequence: ATGTGTTTAATCAA
Position: -134
Score: 4.2 Sequence: ATGATTTCGCTCAA
Locus tag: PMI2047
Name: pdhR Funciton: Pyruvate dehydrogenase complex transcriptional regulator PdhR, GntR family
Locus tag: PMI2046
Name: aceE Funciton: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Locus tag: PMI2045
Name: aceF Funciton: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
Locus tag: PMI2044
Name: lpdA Funciton: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
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pdhR
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Pyruvate dehydrogenase complex transcriptional regulator PdhR, GntR family
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aceE
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Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
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aceF
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Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
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lpdA
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Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)
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Position: -184
Score: 4.9 Sequence: TTGATTTAGATCAG
Locus tag: PMI3451
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: PMI3450
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
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nrdD
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Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
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nrdG
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Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
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Position: -153
Score: 5.5 Sequence: TTGATATAAATCAA
Locus tag: PMI0875
Name: ndh Funciton: NADH dehydrogenase (EC 1.6.99.3) |
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ndh
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NADH dehydrogenase (EC 1.6.99.3)
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Position: -159
Score: 4.1 Sequence: TTATTATTAATCAA
Position: -85
Score: 4.5 Sequence: ATGATCCATATCAA
Locus tag: PMI0706
Name: focA Funciton: Formate efflux transporter (TC 2.A.44 family)
Locus tag: PMI0705
Name: pflB Funciton: Pyruvate formate-lyase (EC 2.3.1.54) |
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focA
|
Formate efflux transporter (TC 2.A.44 family)
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pflB
|
Pyruvate formate-lyase (EC 2.3.1.54)
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Position: -114
Score: 4.9 Sequence: TTGATTTTTAACAA
Locus tag: PMI2528
Name: hyfA Funciton: Hydrogenase-4 component A (EC 1.-.-.-)
Locus tag: PMI2527
Name: hyfB Funciton: Hydrogenase-4 component B (EC 1.-.-.-) / Formate hydrogenlyase subunit 3
Locus tag: PMI2526
Name: hycD Funciton: Hydrogenase-4 component C (EC 1.-.-.-)
Locus tag: PMI2525
Name: hyfD Funciton: Hydrogenase-4 component D (EC 1.-.-.-)
Locus tag: PMI2524
Name: hyfE Funciton: Hydrogenase-4 component E (EC 1.-.-.-)
Locus tag: PMI2523
Name: hyfF Funciton: Hydrogenase-4 component F (EC 1.-.-.-)
Locus tag: PMI2522
Name: hyfG Funciton: Hydrogenase-4 component G (EC 1.-.-.-)
Locus tag: PMI2521
Name: hyfH Funciton: Hydrogenase-4 component H (EC 1.-.-.-)
Locus tag: PMI2520
Name: hyfI Funciton: Hydrogenase-4 component I (EC 1.-.-.-)
Locus tag: PMI2519
Name: hyfJ Funciton: Hydrogenase-4 component J (EC 1.-.-.-) |
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hyfA
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Hydrogenase-4 component A (EC 1.-.-.-)
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hyfB
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Hydrogenase-4 component B (EC 1.-.-.-) / Formate hydrogenlyase subunit 3
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hycD
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Hydrogenase-4 component C (EC 1.-.-.-)
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hyfD
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Hydrogenase-4 component D (EC 1.-.-.-)
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hyfE
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Hydrogenase-4 component E (EC 1.-.-.-)
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hyfF
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Hydrogenase-4 component F (EC 1.-.-.-)
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hyfG
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Hydrogenase-4 component G (EC 1.-.-.-)
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hyfH
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Hydrogenase-4 component H (EC 1.-.-.-)
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hyfI
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Hydrogenase-4 component I (EC 1.-.-.-)
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hyfJ
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Hydrogenase-4 component J (EC 1.-.-.-)
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Position: -92
Score: 3.7 Sequence: TTGATTTAATTAAT
Locus tag: PMI0882
Name: pepT Funciton: Tripeptide aminopeptidase (EC 3.4.11.4) |
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pepT
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Tripeptide aminopeptidase (EC 3.4.11.4)
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Position: -202
Score: 3.7 Sequence: ATGAGATAGATCAC
Locus tag: PMI2546
Name: aspA Funciton: Aspartate ammonia-lyase (EC 4.3.1.1)
Locus tag: PMI2547
Name: dcuA Funciton: C4-dicarboxylate transporter DcuA |
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aspA
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Aspartate ammonia-lyase (EC 4.3.1.1)
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dcuA
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C4-dicarboxylate transporter DcuA
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Position: 9
Score: 3.6 Sequence: ATGAAATACATAAA
Locus tag: PMI0108
Name: cyoA Funciton: Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-)
Locus tag: PMI0107
Name: cyoB Funciton: Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-)
Locus tag: PMI0106
Name: cyoC Funciton: Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-)
Locus tag: PMI0105A
Name: cyoD Funciton: Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-)
Locus tag: PMI0105
Name: cyoE Funciton: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
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cyoA
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Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-)
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cyoB
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Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-)
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cyoC
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Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-)
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cyoD
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Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-)
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cyoE
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Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB
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Position: -182
Score: 3.7 Sequence: TTAAAATACAACAA
Locus tag: PMI0637
Name: moeA Funciton: Molybdopterin biosynthesis protein MoeA
Locus tag: PMI0636
Name: moeB Funciton: Molybdopterin biosynthesis protein MoeB |
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moeA
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Molybdopterin biosynthesis protein MoeA
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moeB
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Molybdopterin biosynthesis protein MoeB
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Position: -194
Score: 3.7 Sequence: TTAATGCGCATCAA
Locus tag: PMI3203
Name: pfkA Funciton: 6-phosphofructokinase (EC 2.7.1.11) |
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pfkA
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6-phosphofructokinase (EC 2.7.1.11)
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Position: -64
Score: 3.9 Sequence: TTGATATAAATTTA
Locus tag: PMI3580
Name: hyfR Funciton: Formate hydrogenlyase transcriptional activator |
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hyfR
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Formate hydrogenlyase transcriptional activator
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Position: -176
Score: 3.6 Sequence: TTTAGTGAGGTCAA
Locus tag: PMI3008
Name: gdhA Funciton: NADP-specific glutamate dehydrogenase (EC 1.4.1.4) |
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gdhA
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NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
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Position: -164
Score: 3.8 Sequence: TTTATTTAAAATAA
Position: -85
Score: 4 Sequence: ATGATTTTCATTAA
Locus tag: PMI3036
Name: sodA Funciton: Manganese superoxide dismutase (EC 1.15.1.1) |
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sodA
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Manganese superoxide dismutase (EC 1.15.1.1)
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Position: -343
Score: 4 Sequence: ATTACATAAATCAA
Position: -282
Score: 4.6 Sequence: TTGATATGTGTCAA
Locus tag: PMI3719
Name: arcA Funciton: Aerobic respiration control protein arcA |
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arcA
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Aerobic respiration control protein arcA
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Position: -163
Score: 4.3 Sequence: TTGTTTTTTCTCAA
Locus tag: PMI2753
Name: ubiC Funciton: Chorismate--pyruvate lyase (EC 4.1.3.40)
Locus tag: PMI2752
Name: ubiA Funciton: 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-) |
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ubiC
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Chorismate--pyruvate lyase (EC 4.1.3.40)
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ubiA
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4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-)
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Position: -7
Score: 3.7 Sequence: TTATTTCATGTCAA
Locus tag: PMI0655
Name: gnd Funciton: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) |
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gnd
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6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
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Position: -69
Score: 3.4 Sequence: TTGTATTGGGACAA
Position: 16
Score: 3.7 Sequence: TAGATTTTAATCGA
Locus tag: PMI2705
Name: soxR Funciton: redox-sensitive transcriptional activator (MerR-family transcriptional regulator) |
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soxR
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redox-sensitive transcriptional activator (MerR-family transcriptional regulator)
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Position: -40
Score: 4.5 Sequence: TTGACACATATCAA
Locus tag: PMI1203
Name: fnr Funciton: Fumarate and nitrate reduction regulatory protein |
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fnr
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Fumarate and nitrate reduction regulatory protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |