Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Fnr in Erwinia carotovora subsp. atroseptica SCRI1043

Properties
Regulator type: Transcription factor
TF locus tag: ECA2207
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Energy metabolism; Anaerobic metabolism
Effector: Oxygen
Regulog: Fnr - Enterobacteriales
Statistics of regulated genes:
- Genes 132
- Operons 51
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 685 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -398
Score: 5.1
Sequence: TTGTTTTAGATCAA
Locus tag: ECA1365
Name: cydA
Funciton: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
Locus tag: ECA1366
Name: cydB
Funciton: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)
cydA
Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
cydB
Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)

Position: -387
Score: 3.8
Sequence: GTTATATTTATCAA
Locus tag: ECA2998
Name: cydA
Funciton: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
Locus tag: ECA2999
Name: cydB
Funciton: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)
cydA
Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
cydB
Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)

Position: -169
Score: 4.3
Sequence: TTGATCTGGATCAG
Locus tag: ECA1255
Name: upp
Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9)
Locus tag: ECA1256
Name: uraA2
Funciton: Uracil permease
upp
Uracil phosphoribosyltransferase (EC 2.4.2.9)
uraA2
Uracil permease

Position: -268
Score: 4.9
Sequence: TTGATGCAAATCAA
Locus tag: ECA2029
Name: narX
Funciton: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-)
Locus tag: ECA2028
Name: narL
Funciton: Nitrate/nitrite response regulator protein NarL, LuxR family
narX
Nitrate/nitrite sensor protein NarX (EC 2.7.3.-)
narL
Nitrate/nitrite response regulator protein NarL, LuxR family

Position: -114
Score: 4.4
Sequence: TTGCGCTAAATCAA
Locus tag: ECA2662
Name: hcp
Funciton: Hydroxylamine reductase (EC 1.7.-.-)
Locus tag: ECA2663
Name: hcr
Funciton: NADH oxidoreductase hcr (EC 1.-.-.-)
hcp
Hydroxylamine reductase (EC 1.7.-.-)
hcr
NADH oxidoreductase hcr (EC 1.-.-.-)

Position: -70
Score: 3.7
Sequence: TTGATCGCGGTCAT
Locus tag: ECA0313
Name: yhcC
Funciton: COG1242: Predicted Fe-S oxidoreductase
yhcC
COG1242: Predicted Fe-S oxidoreductase

Position: -228
Score: 5.1
Sequence: TTGACTTAAATCAA
Position: -175
Score: 5.1
Sequence: TTGTTTTATATCAA
Locus tag: ECA3289
Name: ung
Funciton: Uracil-DNA glycosylase (EC 3.2.2.27)
ung
Uracil-DNA glycosylase (EC 3.2.2.27)

Position: -228
Score: 4
Sequence: ATGATTTTTATTAA
Position: -75
Score: 4.5
Sequence: ATGATCCACATCAA
Locus tag: ECA2596
Name: focA
Funciton: Formate efflux transporter (TC 2.A.44 family)
Locus tag: ECA2597
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
focA
Formate efflux transporter (TC 2.A.44 family)
pflB
Pyruvate formate-lyase (EC 2.3.1.54)

Position: -191
Score: 3.7
Sequence: ATGATTGTTAGCAA
Locus tag: ECA4519
Name: atpI
Funciton: ATP synthase protein I
Locus tag: ECA4518
Name: atpB
Funciton: ATP synthase A chain (EC 3.6.3.14)
Locus tag: ECA4517
Name: atpE
Funciton: ATP synthase C chain (EC 3.6.3.14)
Locus tag: ECA4516
Name: atpF
Funciton: ATP synthase B chain (EC 3.6.3.14)
Locus tag: ECA4515
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: ECA4514
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: ECA4513
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: ECA4512
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: ECA4511
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
atpI
ATP synthase protein I
atpB
ATP synthase A chain (EC 3.6.3.14)
atpE
ATP synthase C chain (EC 3.6.3.14)
atpF
ATP synthase B chain (EC 3.6.3.14)
atpH
ATP synthase delta chain (EC 3.6.3.14)
atpA
ATP synthase alpha chain (EC 3.6.3.14)
atpG
ATP synthase gamma chain (EC 3.6.3.14)
atpD
ATP synthase beta chain (EC 3.6.3.14)
atpC
ATP synthase epsilon chain (EC 3.6.3.14)

Position: -160
Score: 4.8
Sequence: TTGATCTGGATCAA
Locus tag: ECA2303
Name: ompW
Funciton: outer membrane protein W; colicin S4 receptor; putative transporter
ompW
outer membrane protein W; colicin S4 receptor; putative transporter

Position: -134
Score: 4.8
Sequence:
Locus tag: ECA2189
Name: hemA
Funciton: Glutamyl-tRNA reductase (EC 1.2.1.70)
Locus tag: ECA2190
Name: prfA
Funciton: Peptide chain release factor 1
Locus tag: ECA2191
Name: prmC
Funciton: Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2
hemA
Glutamyl-tRNA reductase (EC 1.2.1.70)
prfA
Peptide chain release factor 1
prmC
Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2

Position: -198
Score: 4.3
Sequence: CTGATCCAGATCAA
Locus tag: ECA1254
Name: purM
Funciton: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)
Locus tag: ECA1253
Name: purN
Funciton: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)
purM
Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)
purN
Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)

Position: -91
Score: 4.1
Sequence: ATGATGTTAATCAT
Locus tag: ECA3039
Name: ackA
Funciton: Acetate kinase (EC 2.7.2.1)
ackA
Acetate kinase (EC 2.7.2.1)

Position: -249
Score: 4.3
Sequence: TTGATAAAGAGCAA
Locus tag: ECA4166
Name: glpT
Funciton: Glycerol-3-phosphate transporter
Locus tag: ECA4167
Name: glpQ
Funciton: Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46)
glpT
Glycerol-3-phosphate transporter
glpQ
Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46)

Position: -93
Score: 3.8
Sequence: TTGAGCCAAATAAA
Locus tag: ECA2575
Name: ycgM
Funciton: Fumarylacetoacetate hydrolase family protein
Locus tag: ECA2574
Name: citC
Funciton: [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22)
Locus tag: ECA2573
Name: citD
Funciton: Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)
Locus tag: ECA2572
Name: citE
Funciton: Citrate lyase beta chain (EC 4.1.3.6)
Locus tag: ECA2571
Name: citF
Funciton: Citrate lyase alpha chain (EC 4.1.3.6)
Locus tag: ECA2570
Name: citX
Funciton: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61)
Locus tag: ECA2569
Name: citG
Funciton: 2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase (EC 2.7.8.25)
ycgM
Fumarylacetoacetate hydrolase family protein
citC
[Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22)
citD
Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)
citE
Citrate lyase beta chain (EC 4.1.3.6)
citF
Citrate lyase alpha chain (EC 4.1.3.6)
citX
Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61)
citG
2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase (EC 2.7.8.25)

Position: -311
Score: 3.6
Sequence: TCGATGTTGATCAC
Position: -305
Score: 3.8
Sequence: TTGATCACAAAAAA
Locus tag: ECA2326
Name: adhE
Funciton: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
adhE
Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)

Position: -71
Score: 5.3
Sequence: TTGATATACATCAA
Locus tag: ECA4079
Name: nirB
Funciton: Nitrite reductase, large subunit (EC 1.7.1.4)
Locus tag: ECA4080
Name: nirD
Funciton: Nitrite reductase, small subunit (EC 1.7.1.4)
Locus tag: ECA4081
Name: cysG
Funciton: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
nirB
Nitrite reductase, large subunit (EC 1.7.1.4)
nirD
Nitrite reductase, small subunit (EC 1.7.1.4)
cysG
Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)

Position: -140
Score: 4
Sequence: CTGACCTGAATCAA
Locus tag: ECA4307
Name: pfkA
Funciton: 6-phosphofructokinase (EC 2.7.1.11)
pfkA
6-phosphofructokinase (EC 2.7.1.11)

Position: -251
Score: 4
Sequence: TTGATTACCATGAA
Locus tag: ECA4136
Name: malP
Funciton: Maltodextrin phosphorylase (EC 2.4.1.1)
Locus tag: ECA4135
Name: malQ
Funciton: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
malP
Maltodextrin phosphorylase (EC 2.4.1.1)
malQ
4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)

Position: -383
Score: 3.7
Sequence: ATGATGTAAAGCAG
Locus tag: ECA2836
Name: moeA
Funciton: Molybdopterin biosynthesis protein MoeA
Locus tag: ECA2837
Name: moeB
Funciton: Molybdopterin biosynthesis protein MoeB
moeA
Molybdopterin biosynthesis protein MoeA
moeB
Molybdopterin biosynthesis protein MoeB

Position: -84
Score: 4.5
Sequence: TTGCTCTTTATCAA
Locus tag: ECA4165
Name: glpA
Funciton: Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3)
Locus tag: ECA4164
Name: glpB
Funciton: Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC 1.1.5.3)
Locus tag: ECA4163
Name: glpC
Funciton: Anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3)
glpA
Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3)
glpB
Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC 1.1.5.3)
glpC
Anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3)

Position: -135
Score: 4.8
Sequence: TTGATCAAAAACAA
Locus tag: ECA1875
Name: nrfA
Funciton: Nitrite reductase, cytochrome c(552)
Locus tag: ECA1876
Name: nrfB
Funciton: Cytochrome c-type protein NrfB precursor
Locus tag: ECA1877
Name: nrfC
Funciton: Nitrite reductase, Fe-S center subunit
Locus tag: ECA1878
Name: nrfD
Funciton: Nitrite reductase, NrfD component
Locus tag: ECA1879
Name: nrfE
Funciton: Nitrite reductase, cytochrome c-type heme lyase subunit nrfE
Locus tag: ECA1880
Name: nrfF
Funciton: Nitrite reductase, cytochrome c-type heme lyase subunit nrfF
Locus tag: ECA1881
Name: nrfG
Funciton: Nitrite reductase, cytochrome c-type heme lyase subunit nrfG
nrfA
Nitrite reductase, cytochrome c(552)
nrfB
Cytochrome c-type protein NrfB precursor
nrfC
Nitrite reductase, Fe-S center subunit
nrfD
Nitrite reductase, NrfD component
nrfE
Nitrite reductase, cytochrome c-type heme lyase subunit nrfE
nrfF
Nitrite reductase, cytochrome c-type heme lyase subunit nrfF
nrfG
Nitrite reductase, cytochrome c-type heme lyase subunit nrfG

Position: -117
Score: 3.7
Sequence: ATGAGCTTACTCAA
Locus tag: ECA2818
Name: ybhK
Funciton: Predicted transferase, NAD(P)-binding
ybhK
Predicted transferase, NAD(P)-binding

Position: -38
Score: 4.2
Sequence: TTTATTTAATTCAA
Locus tag: ECA4151
Name: glgB
Funciton: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)
Locus tag: ECA4150
Name: glgX
Funciton: Glycogen debranching enzyme (EC 3.2.1.-)
Locus tag: ECA4149
Name: glgC
Funciton: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
Locus tag: ECA4148
Name: glgA
Funciton: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
Locus tag: ECA4147
Name: glgP
Funciton: Glycogen phosphorylase (EC 2.4.1.1)
glgB
1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)
glgX
Glycogen debranching enzyme (EC 3.2.1.-)
glgC
Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
glgA
Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
glgP
Glycogen phosphorylase (EC 2.4.1.1)

Position: -141
Score: 4.7
Sequence: TTGATCGTTATCAA
Locus tag: ECA2031
Name: narG
Funciton: Respiratory nitrate reductase alpha chain (EC 1.7.99.4)
Locus tag: ECA2032
Name: narH
Funciton: Respiratory nitrate reductase beta chain (EC 1.7.99.4)
Locus tag: ECA2033
Name: narJ
Funciton: Respiratory nitrate reductase delta chain (EC 1.7.99.4)
Locus tag: ECA2034
Name: narI
Funciton: Respiratory nitrate reductase gamma chain (EC 1.7.99.4)
narG
Respiratory nitrate reductase alpha chain (EC 1.7.99.4)
narH
Respiratory nitrate reductase beta chain (EC 1.7.99.4)
narJ
Respiratory nitrate reductase delta chain (EC 1.7.99.4)
narI
Respiratory nitrate reductase gamma chain (EC 1.7.99.4)

Position: -279
Score: 3.7
Sequence: TTTATTTTCATGAA
Position: -243
Score: 4.5
Sequence: TAGATTTAGATCAA
Locus tag: ECA1533
Name: dcuB
Funciton: C4-dicarboxylate transporter DcuB
dcuB
C4-dicarboxylate transporter DcuB

Position: -81
Score: 3.9
Sequence: TTGATTTTGCGCAA
Locus tag: ECA1408
Name: fdnG
Funciton: Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing
Locus tag: ECA1407
Name: fdnH
Funciton: Formate dehydrogenase O beta subunit (EC 1.2.1.2)
Locus tag: ECA1406
Name: fdnI
Funciton: Formate dehydrogenase N gamma subunit (EC 1.2.1.2)
fdnG
Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing
fdnH
Formate dehydrogenase O beta subunit (EC 1.2.1.2)
fdnI
Formate dehydrogenase N gamma subunit (EC 1.2.1.2)

Position: -98
Score: 3.7
Sequence: ATGAGCTTACTCAA
Locus tag: ECA1941
Name: acnA
Funciton: Aconitate hydratase (EC 4.2.1.3); 2-methylisocitrate dehydratase (EC 4.2.1.99)
acnA
Aconitate hydratase (EC 4.2.1.3); 2-methylisocitrate dehydratase (EC 4.2.1.99)

Position: -225
Score: 3.9
Sequence: TTGAGTGATATCAC
Locus tag: ECA0645
Name: uxaC
Funciton: Uronate isomerase (EC 5.3.1.12)
Locus tag: ECA0646
Name: uxaB
Funciton: Altronate oxidoreductase (EC 1.1.1.58)
Locus tag: ECA0647
Name: uxaA
Funciton: Altronate hydrolase (EC 4.2.1.7)
uxaC
Uronate isomerase (EC 5.3.1.12)
uxaB
Altronate oxidoreductase (EC 1.1.1.58)
uxaA
Altronate hydrolase (EC 4.2.1.7)

Position: -155
Score: 3.8
Sequence: GTGACTTAAATCAC
Locus tag: ECA0184
Name: ysgA
Funciton: Predcited carboxymethylenebutenolidase (EC 3.1.1.45)
ysgA
Predcited carboxymethylenebutenolidase (EC 3.1.1.45)

Position: -52
Score: 3.6
Sequence: CTGATTGATAACGA
Locus tag: ECA4477
Name: pstS
Funciton: Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)
Locus tag: ECA4476
Name: pstC
Funciton: Phosphate transport system permease protein PstC (TC 3.A.1.7.1)
Locus tag: ECA4475
Name: pstA
Funciton: Phosphate transport system permease protein PstA (TC 3.A.1.7.1)
Locus tag: ECA4474
Name: pstB
Funciton: Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)
Locus tag: ECA4473
Name: phoU
Funciton: Phosphate transport system regulatory protein PhoU
pstS
Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)
pstC
Phosphate transport system permease protein PstC (TC 3.A.1.7.1)
pstA
Phosphate transport system permease protein PstA (TC 3.A.1.7.1)
pstB
Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)
phoU
Phosphate transport system regulatory protein PhoU

Position: -140
Score: 4
Sequence: TTGATTTATATTGA
Locus tag: ECA0048
Name: pitA
Funciton: Phosphate transporter, low-affinity
pitA
Phosphate transporter, low-affinity

Position: -158
Score: 3.7
Sequence: GTGATTTTTAACAG
Locus tag: ECA2439
Name: icdA
Funciton: Isocitrate dehydrogenase (EC 1.1.1.42)
icdA
Isocitrate dehydrogenase (EC 1.1.1.42)

Position: -185
Score: 4.8
Sequence: TTTATCTAAATCAA
Locus tag: ECA4121
Name: gltA
Funciton: Citrate synthase (EC 2.3.3.1)
gltA
Citrate synthase (EC 2.3.3.1)

Position: -116
Score: 4.2
Sequence: GTGATTTAGCTCAA
Locus tag: ECA3790
Name: pdhR
Funciton: Pyruvate dehydrogenase complex transcriptional regulator PdhR, GntR family
Locus tag: ECA3789
Name: aceE
Funciton: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Locus tag: ECA3788
Name: aceF
Funciton: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
Locus tag: ECA3787
Name: lpdA
Funciton: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)
pdhR
Pyruvate dehydrogenase complex transcriptional regulator PdhR, GntR family
aceE
Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
aceF
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
lpdA
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)

Position: -182
Score: 4.8
Sequence: TTGCTCTACATCAA
Locus tag: ECA0375
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: ECA0374
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD
Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
nrdG
Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)

Position: -149
Score: 5.4
Sequence: TTGATATATATCAA
Locus tag: ECA1815
Name: ndh
Funciton: NADH dehydrogenase (EC 1.6.99.3)
ndh
NADH dehydrogenase (EC 1.6.99.3)

Position: -102
Score: 3.6
Sequence: TTGAGATTTAAAAA
Locus tag: ECA4410
Name: ssuA
Funciton: Sulfonate ABC transporter, periplasmic sulfonate-binding protein ssuA / Alkanesulfonates-binding protein
Locus tag: ECA4411
Name: ssuD
Funciton: Alkanesulfonate monooxygenase (EC 1.14.14.5)
Locus tag: ECA4412
Name: ssuC
Funciton: Alkanesulfonates transport system permease protein
Locus tag: ECA4413
Name: ssuB
Funciton: Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB
ssuA
Sulfonate ABC transporter, periplasmic sulfonate-binding protein ssuA / Alkanesulfonates-binding protein
ssuD
Alkanesulfonate monooxygenase (EC 1.14.14.5)
ssuC
Alkanesulfonates transport system permease protein
ssuB
Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB

Position: -98
Score: 4.1
Sequence: TTGTGTCAGATCAA
Locus tag: ECA1236
Name: hyfR
Funciton: Formate hydrogenlyase transcriptional activator
hyfR
Formate hydrogenlyase transcriptional activator

Position: -106
Score: 4.4
Sequence: TTGATCTCAATAAA
Locus tag: ECA1882
Name: ccmA
Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: ECA1883
Name: ccmB
Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: ECA1884
Name: ccmC
Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: ECA1885
Name: ccmD
Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: ECA1886
Name: ccmE
Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: ECA1887
Name: ccmF
Funciton: Cytochrome c heme lyase subunit CcmF
Locus tag: ECA1888
Name: ccmG
Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: ECA1889
Name: ccmH1
Funciton: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH
Locus tag: ECA1890
Name: ccmH2
Funciton: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH
ccmA
ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
ccmB
ABC transporter involved in cytochrome c biogenesis, CcmB subunit
ccmC
Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
ccmD
Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
ccmE
Cytochrome c-type biogenesis protein CcmE, heme chaperone
ccmF
Cytochrome c heme lyase subunit CcmF
ccmG
Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
ccmH1
Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH
ccmH2
Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH

Position: -321
Score: 3.5
Sequence: ATGACCTGAGACAA
Locus tag: ECA2817
Name: moaA
Funciton: Molybdenum cofactor biosynthesis protein MoaA
Locus tag: ECA2816
Name: moaB
Funciton: Molybdenum cofactor biosynthesis protein MoaB
Locus tag: ECA2815
Name: moaC
Funciton: Molybdenum cofactor biosynthesis protein MoaC
Locus tag: ECA2814
Name: moaD
Funciton: Molybdenum cofactor biosynthesis protein MoaD
Locus tag: ECA2813
Name: moaE
Funciton: Molybdenum cofactor biosynthesis protein MoaE
moaA
Molybdenum cofactor biosynthesis protein MoaA
moaB
Molybdenum cofactor biosynthesis protein MoaB
moaC
Molybdenum cofactor biosynthesis protein MoaC
moaD
Molybdenum cofactor biosynthesis protein MoaD
moaE
Molybdenum cofactor biosynthesis protein MoaE

Position: -288
Score: 4
Sequence: TTGTTCTAAAATAA
Locus tag: ECA0621
Name: aspA
Funciton: Aspartate ammonia-lyase (EC 4.3.1.1)
Locus tag: ECA0620
Name: dcuA
Funciton: C4-dicarboxylate transporter DcuA
aspA
Aspartate ammonia-lyase (EC 4.3.1.1)
dcuA
C4-dicarboxylate transporter DcuA

Position: -230
Score: 3.3
Sequence: GTGACTAGGGTCAA
Locus tag: ECA0626
Name: ubiC
Funciton: Chorismate--pyruvate lyase (EC 4.1.3.40)
Locus tag: ECA0627
Name: ubiA
Funciton: 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-)
ubiC
Chorismate--pyruvate lyase (EC 4.1.3.40)
ubiA
4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-)

Position: -232
Score: 4.7
Sequence: TTGTTATATAACAA
Locus tag: ECA0051
Name: gdhA
Funciton: NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
gdhA
NADP-specific glutamate dehydrogenase (EC 1.4.1.4)

Position: -143
Score: 3.5
Sequence: ATGAAGTAAAGCAA
Locus tag: ECA0092
Name: sodA
Funciton: Manganese superoxide dismutase (EC 1.15.1.1)
sodA
Manganese superoxide dismutase (EC 1.15.1.1)

Position: -339
Score: 5.1
Sequence: TTGATATATGTCAA
Locus tag: ECA3893
Name: arcA
Funciton: Aerobic respiration control protein arcA
arcA
Aerobic respiration control protein arcA

Position: -91
Score: 3.5
Sequence: TTGAATTAAAGAAA
Locus tag: ECA1247
Name: hyfA
Funciton: Hydrogenase-4 component A (EC 1.-.-.-)
Locus tag: ECA1246
Name: hyfB
Funciton: Hydrogenase-4 component B (EC 1.-.-.-) / Formate hydrogenlyase subunit 3
Locus tag: ECA1245
Name: hycD
Funciton: Hydrogenase-4 component C (EC 1.-.-.-)
Locus tag: ECA1244
Name: hyfD
Funciton: Hydrogenase-4 component D (EC 1.-.-.-)
Locus tag: ECA1243
Name: hyfE
Funciton: Hydrogenase-4 component E (EC 1.-.-.-)
Locus tag: ECA1242
Name: hyfF
Funciton: Hydrogenase-4 component F (EC 1.-.-.-)
Locus tag: ECA1241
Name: hyfG
Funciton: Hydrogenase-4 component G (EC 1.-.-.-)
Locus tag: ECA1240
Name: hyfH
Funciton: Hydrogenase-4 component H (EC 1.-.-.-)
Locus tag: ECA1239
Name: hyfI
Funciton: Hydrogenase-4 component I (EC 1.-.-.-)
Locus tag: ECA1238
Name: hyfJ
Funciton: Hydrogenase-4 component J (EC 1.-.-.-)
hyfA
Hydrogenase-4 component A (EC 1.-.-.-)
hyfB
Hydrogenase-4 component B (EC 1.-.-.-) / Formate hydrogenlyase subunit 3
hycD
Hydrogenase-4 component C (EC 1.-.-.-)
hyfD
Hydrogenase-4 component D (EC 1.-.-.-)
hyfE
Hydrogenase-4 component E (EC 1.-.-.-)
hyfF
Hydrogenase-4 component F (EC 1.-.-.-)
hyfG
Hydrogenase-4 component G (EC 1.-.-.-)
hyfH
Hydrogenase-4 component H (EC 1.-.-.-)
hyfI
Hydrogenase-4 component I (EC 1.-.-.-)
hyfJ
Hydrogenase-4 component J (EC 1.-.-.-)

Position: -34
Score: 4.6
Sequence: TTGACCAATATCAA
Locus tag: ECA2207
Name: fnr
Funciton: Fumarate and nitrate reduction regulatory protein
fnr
Fumarate and nitrate reduction regulatory protein

Position: -248
Score: 5.2
Sequence: TTGATATAAAACAA
Position: -195
Score: 5.2
Sequence: TTGATTTAAGTCAA
Position: -55
Score: 3.7
Sequence: TTTAACTACGTCAA
Locus tag: ECA3288
Name: yfiD
Funciton: Stress-induced alternate pyruvate formate-lyase subunit
yfiD
Stress-induced alternate pyruvate formate-lyase subunit

Position: -82
Score: 5
Sequence: TTGATTTGCATCAA
Locus tag: ECA2030
Name: narK
Funciton: Nitrate/nitrite antiporter
narK
Nitrate/nitrite antiporter

Position: -228
Score: 3.3
Sequence: TTGAGTGGTAACAT
Locus tag: ECA1444
Name: gnd
Funciton: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
gnd
6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD