Regulon of Fnr in Klebsiella pneumoniae subsp. pneumoniae MGH 78578
| Regulator type: | Transcription factor |
| TF locus tag: | KPN_01530 |
| Regulator family: | CRP |
| Regulation mode: | activator (repressor) |
| Biological process: | Energy metabolism; Anaerobic metabolism |
| Effector: | Oxygen |
| Regulog: | Fnr - Enterobacteriales |
| Statistics of regulated genes: | |
| - Genes | 145 |
| - Operons | 56 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By TF family - CRP
- By effector - Oxygen
- By pathway - Energy metabolism
- By pathway - Anaerobic metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -345
Score: 5.5 Sequence: TTGATTTATATCAA
Position: -293
Score: 4.1 Sequence: TTGTCTCAAGTCAA
Locus tag: KPN_00736
Name: cydA Funciton: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
Locus tag: KPN_00737
Name: cydB Funciton: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) |
|||
|
cydA
|
Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
|
||
|
cydB
|
Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)
|
||
|
Position: -59
Score: 4 Sequence:
Locus tag: KPN_00413
Name: glnK Funciton: Nitrogen assimilation regulatory protein
Locus tag: KPN_00414
Name: amtB Funciton: Ammonium transporter |
|||
|
glnK
|
Nitrogen assimilation regulatory protein
|
||
|
amtB
|
Ammonium transporter
|
||
|
Position: -251
Score: 5.5 Sequence: TTGATATAAATCAA
Locus tag: KPN_02216
Name: narX Funciton: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-)
Locus tag: KPN_02217
Name: narL Funciton: Nitrate/nitrite response regulator protein NarL, LuxR family |
|||
|
narX
|
Nitrate/nitrite sensor protein NarX (EC 2.7.3.-)
|
||
|
narL
|
Nitrate/nitrite response regulator protein NarL, LuxR family
|
||
|
Position: -104
Score: 3.6 Sequence: ATGTGAAAAAACAA
Locus tag: KPN_00728
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: KPN_00729
Name: sdhD Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: KPN_00730
Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: KPN_00731
Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
|||
|
sdhC
|
Succinate dehydrogenase cytochrome b-556 subunit
|
||
|
sdhD
|
Succinate dehydrogenase hydrophobic membrane anchor protein
|
||
|
sdhA
|
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
|
||
|
sdhB
|
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
|
||
|
Position: -75
Score: 4 Sequence: TTGATCCAGGTCAT
Locus tag: KPN_03623
Name: yhcC Funciton: COG1242: Predicted Fe-S oxidoreductase |
|||
|
yhcC
|
COG1242: Predicted Fe-S oxidoreductase
|
||
|
Position: -104
Score: 4.5 Sequence: TTGATTTGCATCAG
Locus tag: KPN_00654
Name: dcuC Funciton: C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) |
|||
|
dcuC
|
C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1)
|
||
|
Position: -122
Score: 4.2 Sequence: TTGTTTGAAATCAC
Locus tag: KPN_04144
Name: atpI Funciton: ATP synthase protein I
Locus tag: KPN_04143
Name: atpB Funciton: ATP synthase A chain (EC 3.6.3.14)
Locus tag: KPN_04142
Name: atpE Funciton: ATP synthase C chain (EC 3.6.3.14)
Locus tag: KPN_04141
Name: atpF Funciton: ATP synthase B chain (EC 3.6.3.14)
Locus tag: KPN_04140
Name: atpH Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: KPN_04139
Name: atpA Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: KPN_04138
Name: atpG Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: KPN_04137
Name: atpD Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: KPN_04136
Name: atpC Funciton: ATP synthase epsilon chain (EC 3.6.3.14) |
|||
|
atpI
|
ATP synthase protein I
|
||
|
atpB
|
ATP synthase A chain (EC 3.6.3.14)
|
||
|
atpE
|
ATP synthase C chain (EC 3.6.3.14)
|
||
|
atpF
|
ATP synthase B chain (EC 3.6.3.14)
|
||
|
atpH
|
ATP synthase delta chain (EC 3.6.3.14)
|
||
|
atpA
|
ATP synthase alpha chain (EC 3.6.3.14)
|
||
|
atpG
|
ATP synthase gamma chain (EC 3.6.3.14)
|
||
|
atpD
|
ATP synthase beta chain (EC 3.6.3.14)
|
||
|
atpC
|
ATP synthase epsilon chain (EC 3.6.3.14)
|
||
|
Position: 0
Score: 4.2 Sequence: ATGATTAAAATCAC
Locus tag: KPN_00239
Name: nqrA Funciton: Na-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-)
Locus tag: KPN_00240
Name: nqrB Funciton: Na-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-)
Locus tag: KPN_00241
Name: nqrC Funciton: Na-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-)
Locus tag: KPN_00242
Name: nqrD Funciton: Na-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-)
Locus tag: KPN_00243
Name: nqrE Funciton: Na-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-)
Locus tag: KPN_00244
Name: nqrF Funciton: Na-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-) |
|||
|
nqrA
|
Na-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-)
|
||
|
nqrB
|
Na-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-)
|
||
|
nqrC
|
Na-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-)
|
||
|
nqrD
|
Na-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-)
|
||
|
nqrE
|
Na-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-)
|
||
|
nqrF
|
Na-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-)
|
||
|
Position: -72
Score: 5 Sequence: TTGATTTGCATCAA
Locus tag: KPN_03752
Name: nirB Funciton: Nitrite reductase, large subunit (EC 1.7.1.4)
Locus tag: KPN_03753
Name: nirD Funciton: Nitrite reductase, small subunit (EC 1.7.1.4)
Locus tag: KPN_03754
Name: cysG Funciton: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
|||
|
nirB
|
Nitrite reductase, large subunit (EC 1.7.1.4)
|
||
|
nirD
|
Nitrite reductase, small subunit (EC 1.7.1.4)
|
||
|
cysG
|
Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
|
||
|
Position: -392
Score: 3.6 Sequence: TTGATTTACGACGG
Locus tag: KPN_02678
Name: nuoA Funciton: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
Locus tag: KPN_02677
Name: nuoB Funciton: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
Locus tag: KPN_02676
Name: nuoD Funciton: NADH-ubiquinone oxidoreductase chains C and D (EC 1.6.5.3)
Locus tag: KPN_02675
Name: nuoE Funciton: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
Locus tag: KPN_02674
Name: nuoF Funciton: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
Locus tag: KPN_02673
Name: nuoG Funciton: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
Locus tag: KPN_02672
Name: nuoH Funciton: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
Locus tag: KPN_02671
Name: nuoI Funciton: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
Locus tag: KPN_02670
Name: nuoJ Funciton: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
Locus tag: KPN_02669
Name: nuoK Funciton: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
Locus tag: KPN_02668
Name: nuoL Funciton: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
Locus tag: KPN_02667
Name: nuoM Funciton: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
Locus tag: KPN_02666
Name: nuoN Funciton: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
|||
|
nuoA
|
NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
|
||
|
nuoB
|
NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
|
||
|
nuoD
|
NADH-ubiquinone oxidoreductase chains C and D (EC 1.6.5.3)
|
||
|
nuoE
|
NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
|
||
|
nuoF
|
NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
|
||
|
nuoG
|
NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
|
||
|
nuoH
|
NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
|
||
|
nuoI
|
NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
|
||
|
nuoJ
|
NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
|
||
|
nuoK
|
NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
|
||
|
nuoL
|
NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
|
||
|
nuoM
|
NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
|
||
|
nuoN
|
NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
|
||
|
Position: -143
Score: 4.4 Sequence: TTGTCTGAAATCAA
Locus tag: KPN_02235
Name: hemA Funciton: Glutamyl-tRNA reductase (EC 1.2.1.70)
Locus tag: KPN_02234
Name: prfA Funciton: Peptide chain release factor 1
Locus tag: KPN_02233
Name: prmC Funciton: Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 |
|||
|
hemA
|
Glutamyl-tRNA reductase (EC 1.2.1.70)
|
||
|
prfA
|
Peptide chain release factor 1
|
||
|
prmC
|
Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2
|
||
|
Position: -144
Score: 5.5 Sequence: TTGATTTATATCAA
Locus tag: KPN_02828
Name: yfgF Funciton: Predicted cytochrome C-type biogenesis protein |
|||
|
yfgF
|
Predicted cytochrome C-type biogenesis protein
|
||
|
Position: -125
Score: 3.6 Sequence: TTAATTAACAACAT
Locus tag: KPN_00034
Name: citC Funciton: [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22)
Locus tag: KPN_00035
Name: citD Funciton: Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)
Locus tag: KPN_00036
Name: citE Funciton: Citrate lyase beta chain (EC 4.1.3.6)
Locus tag: KPN_00037
Name: citF Funciton: Citrate lyase alpha chain (EC 4.1.3.6)
Locus tag: KPN_00038
Name: citG Funciton: 2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase (EC 2.7.8.25) |
|||
|
citC
|
[Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22)
|
||
|
citD
|
Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)
|
||
|
citE
|
Citrate lyase beta chain (EC 4.1.3.6)
|
||
|
citF
|
Citrate lyase alpha chain (EC 4.1.3.6)
|
||
|
citG
|
2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase (EC 2.7.8.25)
|
||
|
Position: -148
Score: 4.8 Sequence: TTGATGCACATCAA
Locus tag: KPN_01106
Name: ndh Funciton: NADH dehydrogenase (EC 1.6.99.3) |
|||
|
ndh
|
NADH dehydrogenase (EC 1.6.99.3)
|
||
|
Position: -257
Score: 4 Sequence: CTGACCGACATCAA
Locus tag: KPN_00810
Name: moaA Funciton: Molybdenum cofactor biosynthesis protein MoaA
Locus tag: KPN_00811
Name: moaB Funciton: Molybdenum cofactor biosynthesis protein MoaB
Locus tag: KPN_00812
Name: moaC Funciton: Molybdenum cofactor biosynthesis protein MoaC
Locus tag: KPN_00813
Name: moaD Funciton: Molybdenum cofactor biosynthesis protein MoaD
Locus tag: KPN_00814
Name: moaE Funciton: Molybdenum cofactor biosynthesis protein MoaE |
|||
|
moaA
|
Molybdenum cofactor biosynthesis protein MoaA
|
||
|
moaB
|
Molybdenum cofactor biosynthesis protein MoaB
|
||
|
moaC
|
Molybdenum cofactor biosynthesis protein MoaC
|
||
|
moaD
|
Molybdenum cofactor biosynthesis protein MoaD
|
||
|
moaE
|
Molybdenum cofactor biosynthesis protein MoaE
|
||
|
Position: -6
Score: 4 Sequence: TTGATTATGCACAA
Locus tag: KPN_03849
Name: ECA0068 Funciton: Transcriptional regulator, LysR family
Locus tag: KPN_03850
Name: nikA Funciton: Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3)
Locus tag: KPN_03851
Name: nikB Funciton: Nickel transport system permease protein NikB (TC 3.A.1.5.3)
Locus tag: KPN_03852
Name: nikC Funciton: Nickel transport system permease protein NikC (TC 3.A.1.5.3)
Locus tag: KPN_03853
Name: nikD Funciton: Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3)
Locus tag: KPN_03854
Name: nikE Funciton: Nickel transport ATP-binding protein NikE (TC 3.A.1.5.3)
Locus tag: KPN_03855
Name: nikR Funciton: Nickel responsive regulator NikR |
|||
|
ECA0068
|
Transcriptional regulator, LysR family
|
||
|
nikA
|
Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3)
|
||
|
nikB
|
Nickel transport system permease protein NikB (TC 3.A.1.5.3)
|
||
|
nikC
|
Nickel transport system permease protein NikC (TC 3.A.1.5.3)
|
||
|
nikD
|
Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3)
|
||
|
nikE
|
Nickel transport ATP-binding protein NikE (TC 3.A.1.5.3)
|
||
|
nikR
|
Nickel responsive regulator NikR
|
||
|
Position: -123
Score: 4 Sequence: CTGACCTGAATCAA
Locus tag: KPN_04223
Name: pfkA Funciton: 6-phosphofructokinase (EC 2.7.1.11) |
|||
|
pfkA
|
6-phosphofructokinase (EC 2.7.1.11)
|
||
|
Position: -103
Score: 3.3 Sequence: TTAACATTTGACAA
Locus tag: KPN_01021
Name: puuA Funciton: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) |
|||
|
puuA
|
Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11)
|
||
|
Position: -71
Score: 4.1 Sequence: ATGCTCGAAATCAA
Locus tag: KPN_02647
Name: glpA Funciton: Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3)
Locus tag: KPN_02648
Name: glpB Funciton: Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC 1.1.5.3)
Locus tag: KPN_02649
Name: glpC Funciton: Anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3) |
|||
|
glpA
|
Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3)
|
||
|
glpB
|
Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC 1.1.5.3)
|
||
|
glpC
|
Anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3)
|
||
|
Position: -154
Score: 4.1 Sequence: TTCATTGTTATCAA
Locus tag: KPN_04395
Name: aceB Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: KPN_04396
Name: aceA Funciton: Isocitrate lyase (EC 4.1.3.1)
Locus tag: KPN_04397
Name: aceK Funciton: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-) |
|||
|
aceB
|
Malate synthase (EC 2.3.3.9)
|
||
|
aceA
|
Isocitrate lyase (EC 4.1.3.1)
|
||
|
aceK
|
Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
|
||
|
Position: -117
Score: 4.9 Sequence: ATGATCTATATCAA
Locus tag: KPN_00932
Name: focA Funciton: Formate efflux transporter (TC 2.A.44 family)
Locus tag: KPN_00931
Name: pflB Funciton: Pyruvate formate-lyase (EC 2.3.1.54) |
|||
|
focA
|
Formate efflux transporter (TC 2.A.44 family)
|
||
|
pflB
|
Pyruvate formate-lyase (EC 2.3.1.54)
|
||
|
Position: -106
Score: 4.6 Sequence: TTGATCGCTATCAA
Locus tag: KPN_02214
Name: narG Funciton: Respiratory nitrate reductase alpha chain (EC 1.7.99.4)
Locus tag: KPN_02213
Name: narH Funciton: Respiratory nitrate reductase beta chain (EC 1.7.99.4)
Locus tag: KPN_02212
Name: narJ Funciton: Respiratory nitrate reductase delta chain (EC 1.7.99.4)
Locus tag: KPN_02211
Name: narI Funciton: Respiratory nitrate reductase gamma chain (EC 1.7.99.4) |
|||
|
narG
|
Respiratory nitrate reductase alpha chain (EC 1.7.99.4)
|
||
|
narH
|
Respiratory nitrate reductase beta chain (EC 1.7.99.4)
|
||
|
narJ
|
Respiratory nitrate reductase delta chain (EC 1.7.99.4)
|
||
|
narI
|
Respiratory nitrate reductase gamma chain (EC 1.7.99.4)
|
||
|
Position: -76
Score: 4.4 Sequence: TTGCGCTAAATCAA
Locus tag: KPN_00907
Name: hcp Funciton: Hydroxylamine reductase (EC 1.7.-.-)
Locus tag: KPN_00906
Name: hcr Funciton: NADH oxidoreductase hcr (EC 1.-.-.-) |
|||
|
hcp
|
Hydroxylamine reductase (EC 1.7.-.-)
|
||
|
hcr
|
NADH oxidoreductase hcr (EC 1.-.-.-)
|
||
|
Position: -214
Score: 3.8 Sequence: TTGATTTCGAGCAT
Locus tag: KPN_02646
Name: glpT Funciton: Glycerol-3-phosphate transporter
Locus tag: KPN_02645
Name: glpQ Funciton: Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) |
|||
|
glpT
|
Glycerol-3-phosphate transporter
|
||
|
glpQ
|
Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46)
|
||
|
Position: -221
Score: 3.5 Sequence: ACGATCTACATTAA
Locus tag: KPN_00647
Name: ybdN Funciton: Predicted sulfotransferase |
|||
|
ybdN
|
Predicted sulfotransferase
|
||
|
Position: -233
Score: 4.7 Sequence: TTGATCTAAATCAC
Locus tag: KPN_02199
Name: adhE Funciton: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
|||
|
adhE
|
Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
|
||
|
Position: -91
Score: 4 Sequence: TTGATGTCGGTCAG
Locus tag: KPN_00809
Name: ybhK Funciton: Predicted transferase, NAD(P)-binding |
|||
|
ybhK
|
Predicted transferase, NAD(P)-binding
|
||
|
Position: -370
Score: 3.6 Sequence: TTGTTTTTATTAAA
Locus tag: KPN_03787
Name: malP Funciton: Maltodextrin phosphorylase (EC 2.4.1.1)
Locus tag: KPN_03786
Name: malQ Funciton: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) |
|||
|
malP
|
Maltodextrin phosphorylase (EC 2.4.1.1)
|
||
|
malQ
|
4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
|
||
|
Position: -69
Score: 4.7 Sequence: TTGATTTGCGTCAA
Locus tag: KPN_00858
Name: ybiY Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Locus tag: KPN_00857
Name: ybiW Funciton: Pyruvate formate-lyase (EC 2.3.1.54) |
|||
|
ybiY
|
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
|
||
|
ybiW
|
Pyruvate formate-lyase (EC 2.3.1.54)
|
||
|
Position: -26
Score: 3.5 Sequence: TTTATCCAGAGCAA
Locus tag: KPN_03032
Name: ydeJ Funciton: Competence/damage-inducible protein CinA |
|||
|
ydeJ
|
Competence/damage-inducible protein CinA
|
||
|
Position: -114
Score: 3.9 Sequence: ATGTTGTACGACAA
Locus tag: KPN_03624
Name: gltB Funciton: Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
Locus tag: KPN_03625
Name: gltD Funciton: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
|||
|
gltB
|
Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
|
||
|
gltD
|
Glutamate synthase [NADPH] small chain (EC 1.4.1.13)
|
||
|
Position: -125
Score: 4.2 Sequence: TTGATCTAACTCAC
Locus tag: KPN_03520
Name: uxaC Funciton: Uronate isomerase (EC 5.3.1.12)
Locus tag: KPN_03519
Name: uxaA Funciton: Altronate hydrolase (EC 4.2.1.7) |
|||
|
uxaC
|
Uronate isomerase (EC 5.3.1.12)
|
||
|
uxaA
|
Altronate hydrolase (EC 4.2.1.7)
|
||
|
Position: -53
Score: 3.7 Sequence: TTGATATAAGCCAG
Locus tag: KPN_03045
Name: norV Funciton: Anaerobic nitric oxide reductase flavorubredoxin
Locus tag: KPN_03046
Name: norW Funciton: Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-) |
|||
|
norV
|
Anaerobic nitric oxide reductase flavorubredoxin
|
||
|
norW
|
Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-)
|
||
|
Position: -248
Score: 4.2 Sequence: TTGTTCTGGGTCAA
Position: -217
Score: 4.2 Sequence: TTGATGCAAATCAC
Locus tag: KPN_04646
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
|||
|
nrdD
|
Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
|
||
|
Position: -210
Score: 3.4 Sequence: TCTACTCATATCAA
Locus tag: KPN_04367
Name: dcuB Funciton: C4-dicarboxylate transporter DcuB |
|||
|
dcuB
|
C4-dicarboxylate transporter DcuB
|
||
|
Position: -248
Score: 4.1 Sequence: TTGTCATATCTCAA
Locus tag: KPN_01819
Name: katG Funciton: Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) |
|||
|
katG
|
Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7)
|
||
|
Position: 28
Score: 3.6 Sequence: TTGCCGGACAACAA
Locus tag: KPN_00489
Name: gltA Funciton: Citrate synthase (EC 2.3.3.1) |
|||
|
gltA
|
Citrate synthase (EC 2.3.3.1)
|
||
|
Position: -114
Score: 4.7 Sequence: CTGATTTCAATCAA
Locus tag: KPN_00117
Name: pdhR Funciton: Pyruvate dehydrogenase complex transcriptional regulator PdhR, GntR family
Locus tag: KPN_00118
Name: aceE Funciton: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Locus tag: KPN_00119
Name: aceF Funciton: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
Locus tag: KPN_00120
Name: lpdA Funciton: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
|||
|
pdhR
|
Pyruvate dehydrogenase complex transcriptional regulator PdhR, GntR family
|
||
|
aceE
|
Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
|
||
|
aceF
|
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
|
||
|
lpdA
|
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)
|
||
|
Position: -198
Score: 3.8 Sequence: TTGCGGCATATCAA
Locus tag: KPN_03778
Name: feoA Funciton: Ferrous iron transport protein A
Locus tag: KPN_03779
Name: feoB Funciton: Ferrous iron transport protein B
Locus tag: KPN_03780
Name: feoC Funciton: Ferrous iron-sensisng transcriptional regulator FeoC, FeoC family |
|||
|
feoA
|
Ferrous iron transport protein A
|
||
|
feoB
|
Ferrous iron transport protein B
|
||
|
feoC
|
Ferrous iron-sensisng transcriptional regulator FeoC, FeoC family
|
||
|
Position: -25
Score: 4.5 Sequence: TTGTTAAAAAACAA
Locus tag: KPN_04528
Name: dcuA Funciton: Anaerobic C4-dicarboxylate transporter |
|||
|
dcuA
|
Anaerobic C4-dicarboxylate transporter
|
||
|
Position: -206
Score: 5.5 Sequence: TTGATATAAATCAA
Position: -153
Score: 5.1 Sequence: TTGTTTTACATCAA
Locus tag: KPN_02903
Name: ung Funciton: Uracil-DNA glycosylase (EC 3.2.2.27) |
|||
|
ung
|
Uracil-DNA glycosylase (EC 3.2.2.27)
|
||
|
Position: -347
Score: 3.5 Sequence: TTGTTGATGGTCAG
Locus tag: KPN_01133
Name: pepT Funciton: Tripeptide aminopeptidase (EC 3.4.11.4) |
|||
|
pepT
|
Tripeptide aminopeptidase (EC 3.4.11.4)
|
||
|
Position: -326
Score: 3.4 Sequence: GTGATACAAGTCAC
Locus tag: KPN_02084
Name: null Funciton: hypothetical protein
Locus tag: KPN_02083
Name: null Funciton: Monooxygenase, FAD-binding; Glucose-methanol-choline oxidoreductase
Locus tag: KPN_02082
Name: null Funciton: gluconate dehydrogenase cytochrome c subunit, putative
Locus tag: KPN_02081
Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: KPN_02080
Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: KPN_02079
Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: KPN_02078
Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: KPN_02077
Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: KPN_02076
Name: ccmF Funciton: Cytochrome c heme lyase subunit CcmF
Locus tag: KPN_02075
Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: KPN_02074
Name: ccmH Funciton: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH
Locus tag: KPN_02073
Name: ccmH Funciton: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH |
|||
|
hypothetical protein
|
|||
|
Monooxygenase, FAD-binding; Glucose-methanol-choline oxidoreductase
|
|||
|
gluconate dehydrogenase cytochrome c subunit, putative
|
|||
|
ccmA
|
ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
|
||
|
ccmB
|
ABC transporter involved in cytochrome c biogenesis, CcmB subunit
|
||
|
ccmC
|
Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
|
||
|
ccmD
|
Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
|
||
|
ccmE
|
Cytochrome c-type biogenesis protein CcmE, heme chaperone
|
||
|
ccmF
|
Cytochrome c heme lyase subunit CcmF
|
||
|
ccmG
|
Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
|
||
|
ccmH
|
Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH
|
||
|
ccmH
|
Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH
|
||
|
Position: -49
Score: 3.7 Sequence: TTGAGGTCGTTCAA
Locus tag: KPN_00394
Name: cyoA Funciton: Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-)
Locus tag: KPN_00393
Name: cyoB Funciton: Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-)
Locus tag: KPN_00392
Name: cyoC Funciton: Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-)
Locus tag: KPN_00391
Name: cyoD Funciton: Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-)
Locus tag: KPN_00390
Name: cyoE Funciton: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
|||
|
cyoA
|
Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-)
|
||
|
cyoB
|
Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-)
|
||
|
cyoC
|
Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-)
|
||
|
cyoD
|
Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-)
|
||
|
cyoE
|
Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB
|
||
|
Position: -182
Score: 3.8 Sequence: TTGACCTGCGACAA
Locus tag: KPN_00973
Name: ssuE Funciton: FMN reductase (EC 1.5.1.29)
Locus tag: KPN_00972
Name: ssuA Funciton: Sulfonate ABC transporter, periplasmic sulfonate-binding protein ssuA / Alkanesulfonates-binding protein
Locus tag: KPN_00971
Name: ssuD Funciton: Alkanesulfonate monooxygenase (EC 1.14.14.5)
Locus tag: KPN_00970
Name: ssuC Funciton: Alkanesulfonates transport system permease protein
Locus tag: KPN_00969
Name: ssuB Funciton: Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB |
|||
|
ssuE
|
FMN reductase (EC 1.5.1.29)
|
||
|
ssuA
|
Sulfonate ABC transporter, periplasmic sulfonate-binding protein ssuA / Alkanesulfonates-binding protein
|
||
|
ssuD
|
Alkanesulfonate monooxygenase (EC 1.14.14.5)
|
||
|
ssuC
|
Alkanesulfonates transport system permease protein
|
||
|
ssuB
|
Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB
|
||
|
Position: -96
Score: 5 Sequence: TTGATATACGTCAA
Locus tag: KPN_02821
Name: upp Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9)
Locus tag: KPN_02820
Name: uraA2 Funciton: Uracil permease |
|||
|
upp
|
Uracil phosphoribosyltransferase (EC 2.4.2.9)
|
||
|
uraA2
|
Uracil permease
|
||
|
Position: 0
Score: 3.5 Sequence: ATGTTAAACAACAT
Locus tag: KPN_04529
Name: aspA Funciton: Aspartate ammonia-lyase (EC 4.3.1.1) |
|||
|
aspA
|
Aspartate ammonia-lyase (EC 4.3.1.1)
|
||
|
Position: -25
Score: 4.5 Sequence: TTGTTAAAAAACAA
Locus tag: KPN_04528
Name: dcuA Funciton: C4-dicarboxylate transporter DcuA |
|||
|
dcuA
|
C4-dicarboxylate transporter DcuA
|
||
|
Position: -322
Score: 3.7 Sequence: TTTTTATAGTTCAA
Locus tag: KPN_02499
Name: gnd Funciton: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) |
|||
|
gnd
|
6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
|
||
|
Position: -146
Score: 4.2 Sequence: TTGTTCTACATCAC
Locus tag: KPN_04217
Name: sodA Funciton: Manganese superoxide dismutase (EC 1.15.1.1) |
|||
|
sodA
|
Manganese superoxide dismutase (EC 1.15.1.1)
|
||
|
Position: -95
Score: 3.4 Sequence: TTCTTTTCCATAAA
Locus tag: KPN_04462
Name: soxS Funciton: AraC-family transcriptional regulator |
|||
|
soxS
|
AraC-family transcriptional regulator
|
||
|
Position: -247
Score: 4.2 Sequence: TTGATTTCACTCAT
Position: -80
Score: 4.1 Sequence: TTAATCTGGATCAA
Locus tag: KPN_01248
Name: ompW Funciton: outer membrane protein W; colicin S4 receptor; putative transporter |
|||
|
ompW
|
outer membrane protein W; colicin S4 receptor; putative transporter
|
||
|
Position: -173
Score: 5.1 Sequence: TTGATGTAAAACAA
Position: -120
Score: 5.5 Sequence: TTGATTTATATCAA
Locus tag: KPN_02902
Name: yfiD Funciton: Stress-induced alternate pyruvate formate-lyase subunit |
|||
|
yfiD
|
Stress-induced alternate pyruvate formate-lyase subunit
|
||
|
Position: -91
Score: 4.1 Sequence: ATGATGTTAATCAT
Locus tag: KPN_02687
Name: ackA Funciton: Acetate kinase (EC 2.7.2.1) |
|||
|
ackA
|
Acetate kinase (EC 2.7.2.1)
|
||
|
Position: -327
Score: 4.6 Sequence: TTGACCAATATCAA
Position: -185
Score: 3.5 Sequence: ATGAGCTTGATCAG
Locus tag: KPN_01530
Name: fnr Funciton: Fumarate and nitrate reduction regulatory protein |
|||
|
fnr
|
Fumarate and nitrate reduction regulatory protein
|
||
|
Position: -291
Score: 5.1 Sequence: TTGATATATGTCAA
Locus tag: KPN_04856
Name: arcA Funciton: Aerobic respiration control protein arcA |
|||
|
arcA
|
Aerobic respiration control protein arcA
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |