Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ubiC gene

Properties
Regulog: Fnr - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Energy metabolism; Anaerobic metabolism
Effector: Oxygen
Phylum: Gammaproteobacteria
Built upon 685 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Erwinia amylovora ATCC 49946
Position: -194
Score: 3.81
Sequence: CTGATATTAGTCAT
Locus tag: EAM_0260
Name: ubiC
Funciton: Chorismate--pyruvate lyase (EC 4.1.3.40)
Locus tag: EAM_0261
Name: ubiA
Funciton: 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-)
ubiC-ubiA -194 3.8 CTGATATTAGTCAT EAM_0260
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -230
Score: 3.32
Sequence: GTGACTAGGGTCAA
Locus tag: ECA0626
Name: ubiC
Funciton: Chorismate--pyruvate lyase (EC 4.1.3.40)
Locus tag: ECA0627
Name: ubiA
Funciton: 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-)
ubiC-ubiA -230 3.3 GTGACTAGGGTCAA ECA0626
Escherichia coli str. K-12 substr. MG1655
Position: -70
Score: 3.37
Sequence: TTGCTTTACATCTC
Locus tag: b4039
Name: ubiC
Funciton: Chorismate--pyruvate lyase (EC 4.1.3.40)
Locus tag: b4040
Name: ubiA
Funciton: 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-)
ubiC-ubiA -70 3.4 TTGCTTTACATCTC b4039
Photorhabdus luminescens subsp. laumondii TTO1
Position: -253
Score: 3.76
Sequence: TTATTTTTGGTCAA
Locus tag: plu4378
Name: ubiC
Funciton: Chorismate--pyruvate lyase (EC 4.1.3.40)
Locus tag: plu4377
Name: ubiA
Funciton: 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-)
ubiC-ubiA -253 3.8 TTATTTTTGGTCAA plu4378
Proteus mirabilis HI4320
Position: -163
Score: 4.33
Sequence: TTGTTTTTTCTCAA
Locus tag: PMI2753
Name: ubiC
Funciton: Chorismate--pyruvate lyase (EC 4.1.3.40)
Locus tag: PMI2752
Name: ubiA
Funciton: 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-)
ubiC-ubiA -163 4.3 TTGTTTTTTCTCAA PMI2753
Serratia proteamaculans 568
Position: -223
Score: 3.61
Sequence: TTGCTGGAGATCAC
Locus tag: Spro_4464
Name: ubiC
Funciton: Chorismate--pyruvate lyase (EC 4.1.3.40)
Locus tag: Spro_4463
Name: ubiA
Funciton: 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-)
ubiC-ubiA -223 3.6 TTGCTGGAGATCAC Spro_4464
Yersinia pestis KIM
Position: -253
Score: 3.34
Sequence: CTGATATTTATAAT
Locus tag: y0568
Name: ubiC
Funciton: Chorismate--pyruvate lyase (EC 4.1.3.40)
Locus tag: y0569
Name: ubiA
Funciton: 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-)
ubiC-ubiA -253 3.3 CTGATATTTATAAT y0568
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