Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulons of Pseudoalteromonas tunicata D2

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF ArgR Arginine Arginine biosynthesis; Arginine degradation 8 9
TF BglR Beta-glucoside Beta-glucosides utilization 3 6
TF BirA Biotin Biotin biosynthesis 2 2
TF CPS_0449 Multidrug resistance; Multidrug efflux 1 1
TF CPS_4612 Metabolite transport 1 1
TF FabR Unsaturated acyl-ACP; Unsaturated acyl-CoA Fatty acid biosynthesis 7 6
TF FadR Palmitoyl-CoA; Oleoyl-CoA Fatty acid degradation 8 5
TF Fur Iron ion, (Fe2+) Iron homeostasis 26 24
TF HmgS Tyrosine degradation 2 2
TF HrcA Heat shock Heat shock response 1 1
TF HutC cis-Urocanic acid Histidine utilization 4 2
TF HypR Proline; 4-hydroxyproline Proline and 4-hydrohyproline utilization 6 9
TF IscR Iron-sulfur cluster redox state Iron-sulfur cluster biogenesis 4 6
TF LexA DNA damage SOS response 11 12
TF LiuR Branched-chain amino acid degradation 11 10
TF MalR Maltose Maltose utilization; Maltodextrin utilization 6 5
TF ManR1 Mannose Mannosides utilization; Mannose utilization 5 2
TF MetJ S-adenosylmethionine Methionine metabolism; Methionine biosynthesis 15 20
TF MetR Homocysteine Methionine biosynthesis 4 5
TF NagR N-acetylglucosamine N-acetylglucosamine utilization 9 12
TF NorR Nitric oxide Nitrosative stress response 2 4
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 1 2
TF NtrC Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 3 3
TF PTD2_03046 Metabolite transport 2 3
TF PdhR Pyruvate Pyruvate metabolism 2 3
TF PdxW Pyridoxal-5-phosphate Pyridoxine/pyridoxal homeostasis 1 1
TF PrpR 2-methylcitrate Methylcitrate utilization 1 3
TF ScrR Sucrose Sucrose utilization 6 3
TF SoxR Paraquat Superoxide stress response 1 1
TF TreR Trehalose Trehalose utilization 3 3
TF TyrR1 Tyrosine; Phenylalanine Aromatic amino acid metabolism 6 6
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 4 5
RNA TPP 2 1
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