Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NagR in Pseudoalteromonas tunicata D2

Properties
Regulator type: Transcription factor
TF locus tag: PTD2_17625
Regulator family: LacI
Regulation mode: repressor
Biological process: N-acetylglucosamine utilization
Effector: N-acetylglucosamine
Regulog: NagR - Alteromonadales
Statistics of regulated genes:
- Genes 14
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 27 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -162
Score: 5.6
Sequence: GATGACAACGGTGTCAAA
Position: -129
Score: 6.2
Sequence: GTTGACAGCGTTGTCATT
Locus tag: PTD2_17630
Name: pgi2
Funciton: Glucose-6-phosphate isomerase (EC 5.3.1.9)
PTD2_17630
pgi2
Glucose-6-phosphate isomerase (EC 5.3.1.9)
Position: -201
Score: 5.4
Sequence: AATGATACCGGTGTCATG
Position: -169
Score: 5.3
Sequence: GATGACACCGGTATCATG
Locus tag: PTD2_16786
Name: pckA
Funciton: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
PTD2_16786
pckA
Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
Position: -158
Score: 5.4
Sequence: TATGATAGCGCTGTCATT
Locus tag: PTD2_07429
Name: nagP
Funciton: N-acetyl glucosamine transporter, NagP
PTD2_07429
nagP
N-acetyl glucosamine transporter, NagP
Position: -117
Score: 6.4
Sequence: AATGACAACGCTGTCATT
Locus tag: PTD2_18190
Name: nagK
Funciton: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
Locus tag: PTD2_18195
Name: nagA
Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: PTD2_18200
Name: nagX
Funciton: N-acetylglucosamine related transporter, NagX
PTD2_18190
nagK
N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
PTD2_18195
nagA
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
PTD2_18200
nagX
N-acetylglucosamine related transporter, NagX
Position: -237
Score: 6.2
Sequence: AATGACAACGCTGTCAAC
Position: -204
Score: 5.6
Sequence: TTTGACACCGTTGTCATC
Locus tag: PTD2_17625
Name: nagR
Funciton: Transcriptional regulator of N-acetylglucosamine utilization, LacI family
PTD2_17625
nagR
Transcriptional regulator of N-acetylglucosamine utilization, LacI family
Position: -139
Score: 5.9
Sequence: AATGACAGCGTTGTCATA
Locus tag: PTD2_18205
Name: nagB
Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
PTD2_18205
nagB
Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Position: -73
Score: 6.4
Sequence: GATGACAGCGTTGTCATC
Locus tag: PTD2_17650
Name: omp_nag
Funciton: N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
Locus tag: PTD2_17655
Name: trpX
Funciton: Tryptophan halogenase
PTD2_17650
omp_nag
N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
PTD2_17655
trpX
Tryptophan halogenase
Position: -71
Score: 5.7
Sequence: TATGACAGCGTTGTCATG
Locus tag: PTD2_17670
Name: omp_nag
Funciton: N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
Locus tag: PTD2_17675
Name: trpX
Funciton: Tryptophan halogenase
Locus tag: PTD2_17680
Name: trpX
Funciton: Tryptophan halogenase
PTD2_17670
omp_nag
N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
PTD2_17675
trpX
Tryptophan halogenase
PTD2_17680
trpX
Tryptophan halogenase
Position: -262
Score: 6.1
Sequence: GGTGACAACGCTGTCATC
Locus tag: PTD2_17660
Name: trpX
Funciton: Tryptophan halogenase
PTD2_17660
trpX
Tryptophan halogenase
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