Regulon of Zur in Pseudoalteromonas tunicata D2
| Regulator type: | Transcription factor |
| TF locus tag: | PTD2_07999 |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Zinc homeostasis |
| Effector: | Zinc ion, (Zn2+) |
| Regulog: | Zur - Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 4 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Alteromonadales
- By trascription factor - Zur
- By TF family - FUR
- By effector - Zinc ion, (Zn2+)
- By pathway - Zinc homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -39
Score: 5.8 Sequence: CTTTTGATATATTATCACATAAC
Locus tag: PTD2_00701
Name: PF08856 Funciton: hypothetical protein |
|||
|
PF08856
|
hypothetical protein
|
||
|
Position: -34
Score: 5.7 Sequence: GTTATGATATACTATCACATAAT
Locus tag: PTD2_02796
Name: rpmE2 Funciton: LSU ribosomal protein L31p
Locus tag: PTD2_02801
Name: rpmJ Funciton: LSU ribosomal protein L36p |
|||
|
rpmE2
|
LSU ribosomal protein L31p
|
||
|
rpmJ
|
LSU ribosomal protein L36p
|
||
|
Position: -83
Score: 5.6 Sequence: CAAATGTTATAGCATCACAGTTG
Position: -43
Score: 5 Sequence: GTAATGTTACACTATCTCAATTG
Locus tag: PTD2_19912
Name: omr Funciton: Zinc-regulated outer membrane receptor |
|||
|
omr
|
Zinc-regulated outer membrane receptor
|
||
|
Position: -47
Score: 6 Sequence: CTTTTGTTATATTATCACAATAT
Locus tag: PTD2_14447
Name: ribA Funciton: GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: PTD2_14452
Name: ribA Funciton: GTP cyclohydrolase II (EC 3.5.4.25) |
|||
|
ribA
|
GTP cyclohydrolase II (EC 3.5.4.25)
|
||
|
ribA
|
GTP cyclohydrolase II (EC 3.5.4.25)
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |