Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of TreR in Pseudoalteromonas tunicata D2

Properties
Regulator type: Transcription factor
TF locus tag: PTD2_20307
Regulator family: LacI
Regulation mode: repressor
Biological process: Trehalose utilization
Effector: Trehalose
Regulog: TreR - Alteromonadales
Statistics of regulated genes:
- Genes 4
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 16 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -165
Score: 6.4
Sequence: TTATGCAAACGTTTGCAATT
Locus tag: PTD2_20307
Name: treR
Funciton: Transcriptional regulator of trehalose utilization, LacI family
treR
Transcriptional regulator of trehalose utilization, LacI family

Position: -113
Score: 6.4
Sequence: AAATGCAAACGTTTGCATTT
Locus tag: PTD2_20312
Name: treT
Funciton: Predicted trehalose permease, MFS family, FucP subfamily
Locus tag: PTD2_20317
Name: treF
Funciton: Trehalase (EC 3.2.1.28)
treT
Predicted trehalose permease, MFS family, FucP subfamily
treF
Trehalase (EC 3.2.1.28)

Position: -124
Score: 6.4
Sequence: AATTGCAAACGTTTGCATAA
Locus tag: PTD2_20302
Name: omp(Tre)
Funciton: Trehalose-regulated TonB-dependent outer membrane receptor
omp(Tre)
Trehalose-regulated TonB-dependent outer membrane receptor
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
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