Profile of regulator TreR in Alteromonadales
Properties
| Regulator family: |
LacI |
| Regulation mode: |
repressor |
| Biological process: |
Trehalose utilization |
| Effector: |
Trehalose |
| Regulog: |
TreR - Alteromonadales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Colwellia psychrerythraea 34H
|
|
CPS_0977 |
omp(Tre) |
-142 |
5.9 |
CAATGCAATCGATTGTAAAA |
|
CPS_0977 |
omp(Tre) |
-119 |
6.1 |
CCTTGCAATCGATTGCATTA |
|
CPS_0981 |
treT |
-94 |
4.8 |
ATATGCAATCGATAGTGTTT |
|
CPS_0978 |
treR |
-94 |
6.1 |
TAATGCAATCGATTGCAAGG |
|
CPS_0978 |
treR |
-71 |
5.9 |
TTTTACAATCGATTGCATTG |
|
CPS_0980 |
null |
-133 |
4.8 |
AAACACTATCGATTGCATAT |
|
CPS_0980 |
null |
-76 |
6.4 |
TTTTGCAAACGATTGCATAA |
|
CPS_0981 |
treT |
-151 |
6.4 |
TTATGCAATCGTTTGCAAAA |
|
Pseudoalteromonas atlantica T6c
|
|
Patl_1823 |
treR |
-381 |
6.4 |
AAATGCAAACGATTGCAATT |
|
Patl_1824 |
treT |
-73 |
6.2 |
GAATGCAAACGATTGCATTT |
|
Patl_1822 |
omp(Tre) |
-64 |
6.4 |
AATTGCAATCGTTTGCATTT |
|
Patl_1822 |
omp(Tre) |
-88 |
6.4 |
AAATGCAAACGATTGCAAAA |
|
Patl_1823 |
treR |
-357 |
6.4 |
TTTTGCAATCGTTTGCATTT |
|
Pseudoalteromonas tunicata D2
|
|
PTD2_20302 |
omp(Tre) |
-124 |
6.4 |
AATTGCAAACGTTTGCATAA |
|
PTD2_20312 |
treT |
-113 |
6.4 |
AAATGCAAACGTTTGCATTT |
|
PTD2_20307 |
treR |
-165 |
6.4 |
TTATGCAAACGTTTGCAATT |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
DOWNLOAD
|
