Profile of regulator TreR in Alteromonadales

Properties
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Trehalose utilization
Effector:	Trehalose
Regulog:	TreR - Alteromonadales

Member of regulog collections

By taxonomy - Alteromonadales
By TF family - LacI
By effector - Trehalose
By pathway - Trehalose utilization

Transcription factor binding sites

	Locus Tag	Name	Position	Score	Sequence
Colwellia psychrerythraea 34H
	CPS_0977	omp(Tre)	-142	5.9	CAATGCAATCGATTGTAAAA
	CPS_0977	omp(Tre)	-119	6.1	CCTTGCAATCGATTGCATTA
	CPS_0981	treT	-94	4.8	ATATGCAATCGATAGTGTTT
	CPS_0978	treR	-94	6.1	TAATGCAATCGATTGCAAGG
	CPS_0978	treR	-71	5.9	TTTTACAATCGATTGCATTG
	CPS_0980	null	-133	4.8	AAACACTATCGATTGCATAT
	CPS_0980	null	-76	6.4	TTTTGCAAACGATTGCATAA
	CPS_0981	treT	-151	6.4	TTATGCAATCGTTTGCAAAA
Pseudoalteromonas atlantica T6c
	Patl_1823	treR	-381	6.4	AAATGCAAACGATTGCAATT
	Patl_1824	treT	-73	6.2	GAATGCAAACGATTGCATTT
	Patl_1822	omp(Tre)	-64	6.4	AATTGCAATCGTTTGCATTT
	Patl_1822	omp(Tre)	-88	6.4	AAATGCAAACGATTGCAAAA
	Patl_1823	treR	-357	6.4	TTTTGCAATCGTTTGCATTT
Pseudoalteromonas tunicata D2
	PTD2_20302	omp(Tre)	-124	6.4	AATTGCAAACGTTTGCATAA
	PTD2_20312	treT	-113	6.4	AAATGCAAACGTTTGCATTT
	PTD2_20307	treR	-165	6.4	TTATGCAAACGTTTGCAATT

Export
	Regulatory Sites	[ FASTA format ]	DOWNLOAD