Regulon of MetR in Pseudoalteromonas tunicata D2
| Regulator type: | Transcription factor |
| TF locus tag: | PTD2_22482 |
| Regulator family: | LysR |
| Regulation mode: | |
| Biological process: | Methionine biosynthesis |
| Effector: | Homocysteine |
| Regulog: | MetR - Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 3 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Alteromonadales
- By trascription factor - MetR
- By TF family - LysR
- By effector - Homocysteine
- By pathway - Methionine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -109
Score: 4.9 Sequence: AATGAAAAAAATTCAAC
Position: -89
Score: 4.4 Sequence: GATGAAAAACTTTCACT
Locus tag: PTD2_08889
Name: metF-II Funciton: 5,10-methylenetetrahydrofolate reductase, non-orthologous isozyme (EC 1.5.1.20) |
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metF-II
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5,10-methylenetetrahydrofolate reductase, non-orthologous isozyme (EC 1.5.1.20)
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Position: -306
Score: 4.3 Sequence: TATGAATTTAATTAACA
Position: -17
Score: 4.7 Sequence: CATGAGAATTATTAAAG
Locus tag: PTD2_22482
Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
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metR
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Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
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Position: -133
Score: 5 Sequence: TGTGAAATTTTTTCAAT
Locus tag: PTD2_09219
Name: glyA Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1) |
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glyA
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Serine hydroxymethyltransferase (EC 2.1.2.1)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |