Regulon of FadR in Pseudoalteromonas tunicata D2
| Regulator type: | Transcription factor |
| TF locus tag: | PTD2_15602 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor (activator) |
| Biological process: | Fatty acid degradation |
| Effector: | Palmitoyl-CoA; Oleoyl-CoA |
| Regulog: | FadR - Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Alteromonadales
- By trascription factor - FadR
- By TF family - GntR/Others
- By effector - Palmitoyl-CoA
- By effector - Oleoyl-CoA
- By pathway - Fatty acid degradation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -131
Score: 5.6 Sequence: TAGTGGTCAGACCTCTA
Locus tag: PTD2_22672
Name: fadE Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) |
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fadE
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Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
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Position: -32
Score: 5.7 Sequence: AACAGGTCAGACCTGTA
Locus tag: PTD2_11739
Name: fadI Funciton: FadI component of anaerobic fatty acid oxidation complex
Locus tag: PTD2_11734
Name: fadJ Funciton: FadJ component of anaerobic fatty acid oxidation complex |
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fadI
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FadI component of anaerobic fatty acid oxidation complex
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fadJ
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FadJ component of anaerobic fatty acid oxidation complex
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Position: -33
Score: 4.7 Sequence: CAGAGGTATGACCAGTA
Locus tag: PTD2_19952
Name: fadH Funciton: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) |
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fadH
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2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
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Position: -20
Score: 4.3 Sequence: ATCTGGTCGGATGAGTT
Locus tag: PTD2_02811
Name: fadE2 Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) |
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fadE2
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Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
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Position: -66
Score: 5.1 Sequence: AACTGGTCTGACCTTTT
Locus tag: PTD2_02881
Name: tesB Funciton: Acyl-CoA thioesterase |
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tesB
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Acyl-CoA thioesterase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |