Regulon of FadR in Pseudoalteromonas tunicata D2

Properties
Regulator type:	Transcription factor
TF locus tag:	PTD2_15602
Regulator family:	GntR/Others
Regulation mode:	repressor (activator)
Biological process:	Fatty acid degradation
Effector:	Palmitoyl-CoA; Oleoyl-CoA
Regulog:	FadR - Alteromonadales
Statistics of regulated genes:
- Genes	6
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 39 sites [see more]

Member of regulog collections

By taxonomy - Alteromonadales
By trascription factor - FadR
By TF family - GntR/Others
By effector - Palmitoyl-CoA
By effector - Oleoyl-CoA
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -131 Score: 5.6 Sequence: TAGTGGTCAGACCTCTA Locus tag: PTD2_22672 Name: fadE Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	PTD2_22672	fadE	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -32 Score: 5.7 Sequence: AACAGGTCAGACCTGTA Locus tag: PTD2_11739 Name: fadI Funciton: FadI component of anaerobic fatty acid oxidation complex Locus tag: PTD2_11734 Name: fadJ Funciton: FadJ component of anaerobic fatty acid oxidation complex
	PTD2_11739	fadI	FadI component of anaerobic fatty acid oxidation complex
	PTD2_11734	fadJ	FadJ component of anaerobic fatty acid oxidation complex
Position: -33 Score: 4.7 Sequence: CAGAGGTATGACCAGTA Locus tag: PTD2_19952 Name: fadH Funciton: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
	PTD2_19952	fadH	2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
Position: -20 Score: 4.3 Sequence: ATCTGGTCGGATGAGTT Locus tag: PTD2_02811 Name: fadE2 Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	PTD2_02811	fadE2	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -66 Score: 5.1 Sequence: AACTGGTCTGACCTTTT Locus tag: PTD2_02881 Name: tesB Funciton: Acyl-CoA thioesterase
	PTD2_02881	tesB	Acyl-CoA thioesterase

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD