Profile of regulator FadR in Alteromonadales
| Regulator family: | GntR/Others |
| Regulation mode: | repressor (activator) |
| Biological process: | Fatty acid degradation |
| Effector: | Palmitoyl-CoA; Oleoyl-CoA |
| Regulog: | FadR - Alteromonadales |
Member of regulog collections
- By taxonomy - Alteromonadales
- By trascription factor - FadR
- By TF family - GntR/Others
- By effector - Palmitoyl-CoA
- By effector - Oleoyl-CoA
- By pathway - Fatty acid degradation
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Pseudoalteromonas atlantica T6c | |||||
| Patl_0201 | fadB | -199 | 4.4 | AACTGGCATGACCAGTT | |
| Patl_2492 | fadE | -31 | 5.3 | CTCTGGTCTGACCTCTA | |
| Patl_1663 | fadI | -46 | 5.6 | TACAGGTCAGACCACTT | |
| Patl_1688 | fadE2 | -31 | 4.8 | AACTGGTCAGATGAGCG | |
| Patl_1408 | acdB | -75 | 4.9 | AAGTGGTTAGACCAGTT | |
| Alteromonas macleodii 'Deep ecotype' | |||||
| MADE_02424 | tesB | -24 | 3.7 | AACTCATCAGACCAGAC | |
| MADE_03736 | fadB | -174 | 3.8 | AAGTCATCGGACCACTA | |
| MADE_02152 | fadE | -97 | 4.5 | TGCTGGTCTGACCTCGA | |
| MADE_02701 | fadI | -65 | 5.6 | TACAGGTCAGACCACTT | |
| MADE_01137 | fadD | -79 | 4.2 | AAGTTATCAGACCAGTT | |
| MADE_02616 | fadE2 | -28 | 4.8 | AACTGGTCAGATGAGCG | |
| Glaciecola sp. HTCC2999 | |||||
| GHTCC_010100011184 | fadB | -67 | 4.4 | TACTTGTAAGACCAGTT | |
| GHTCC_010100006812 | fadE | -27 | 4.6 | ATCTGGTCTGACCATCA | |
| GHTCC_010100010338 | fadI | -100 | 4.8 | TAGAGGTCGGACCACTG | |
| GHTCC_010100000785 | fadE2 | -59 | 4.9 | AACTGGTCAGATGAGCT | |
| Colwellia psychrerythraea 34H | |||||
| CPS_3157 | fadI | -55 | 5.6 | AAGAGGTCAGACCTCTT | |
| CPS_2263 | acdB | -70 | 4.6 | TAGTGGTATGACCAGTG | |
| CPS_0925 | fadH | -30 | 4.7 | AACTGGTACGACCAATA | |
| Alteromonadales bacterium TW-7 | |||||
| ATW7_08866 | fadE | -30 | 5.1 | AGGTGGTCTGACCTCTA | |
| ATW7_00335 | COG0596 | -54 | 4.7 | TAGTGGTCTGACAACTT | |
| ATW7_05611 | fadI | -32 | 5.5 | AACAGGTCAGACCTGTC | |
| ATW7_02822 | tesB | -65 | 4.6 | TACTGGCCTGACCAGTT | |
| ATW7_02937 | fadE2 | -22 | 4.3 | ATCTGGTCGGATGAGTT | |
| ATW7_07132 | fadH | -30 | 4.8 | CACAGGTTAGACCAGTT | |
| Pseudoalteromonas haloplanktis TAC125 | |||||
| PSHAa1952 | fadE | -31 | 5.1 | AGGTGGTCTGACCTCTA | |
| PSHAa0966 | fadI | -33 | 5.5 | AACAGGTCAGACCTGTC | |
| PSHAb0355 | tesB | -67 | 4.3 | TGCTGGTCTGACAAGTT | |
| PSHAa1410 | fadH | -18 | 4.8 | CACAGGTTAGACCAGTT | |
| PSHAb0374 | fadE2 | -22 | 4.3 | ATCTGGTCGGATGAGTT | |
| Pseudoalteromonas tunicata D2 | |||||
| PTD2_11739 | fadI | -32 | 5.7 | AACAGGTCAGACCTGTA | |
| PTD2_22672 | fadE | -131 | 5.6 | TAGTGGTCAGACCTCTA | |
| PTD2_19952 | fadH | -33 | 4.7 | CAGAGGTATGACCAGTA | |
| PTD2_02811 | fadE2 | -20 | 4.3 | ATCTGGTCGGATGAGTT | |
| PTD2_02881 | tesB | -66 | 5.1 | AACTGGTCTGACCTTTT | |
| Idiomarina baltica OS145 | |||||
| OS145_01812 | fadE | -33 | 5.7 | TACTGGTCAGACCTCTA | |
| OS145_12280 | fadI | -48 | 4.8 | GTGTGGTCAGACCAGTA | |
| Idiomarina loihiensis L2TR | |||||
| IL1827 | fadD | -67 | 4 | AACTGGTCGGATATGCG | |
| IL1665 | fadE | -34 | 5.5 | CACTGGTCAGACCTCCA | |
| IL0994 | fadI | -42 | 5.1 | TTGTGGTCAGACCAGTA | |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |