Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator FadR in Alteromonadales

Properties
Regulator family: GntR/Others
Regulation mode: repressor (activator)
Biological process: Fatty acid degradation
Effector: Palmitoyl-CoA; Oleoyl-CoA
Regulog: FadR - Alteromonadales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Pseudoalteromonas atlantica T6c
Patl_0201 fadB -199 4.4 AACTGGCATGACCAGTT
Patl_2492 fadE -31 5.3 CTCTGGTCTGACCTCTA
Patl_1663 fadI -46 5.6 TACAGGTCAGACCACTT
Patl_1688 fadE2 -31 4.8 AACTGGTCAGATGAGCG
Patl_1408 acdB -75 4.9 AAGTGGTTAGACCAGTT
Alteromonas macleodii 'Deep ecotype'
MADE_02424 tesB -24 3.7 AACTCATCAGACCAGAC
MADE_03736 fadB -174 3.8 AAGTCATCGGACCACTA
MADE_02152 fadE -97 4.5 TGCTGGTCTGACCTCGA
MADE_02701 fadI -65 5.6 TACAGGTCAGACCACTT
MADE_01137 fadD -79 4.2 AAGTTATCAGACCAGTT
MADE_02616 fadE2 -28 4.8 AACTGGTCAGATGAGCG
Glaciecola sp. HTCC2999
GHTCC_010100011184 fadB -67 4.4 TACTTGTAAGACCAGTT
GHTCC_010100006812 fadE -27 4.6 ATCTGGTCTGACCATCA
GHTCC_010100010338 fadI -100 4.8 TAGAGGTCGGACCACTG
GHTCC_010100000785 fadE2 -59 4.9 AACTGGTCAGATGAGCT
Colwellia psychrerythraea 34H
CPS_3157 fadI -55 5.6 AAGAGGTCAGACCTCTT
CPS_2263 acdB -70 4.6 TAGTGGTATGACCAGTG
CPS_0925 fadH -30 4.7 AACTGGTACGACCAATA
Alteromonadales bacterium TW-7
ATW7_08866 fadE -30 5.1 AGGTGGTCTGACCTCTA
ATW7_00335 COG0596 -54 4.7 TAGTGGTCTGACAACTT
ATW7_05611 fadI -32 5.5 AACAGGTCAGACCTGTC
ATW7_02822 tesB -65 4.6 TACTGGCCTGACCAGTT
ATW7_02937 fadE2 -22 4.3 ATCTGGTCGGATGAGTT
ATW7_07132 fadH -30 4.8 CACAGGTTAGACCAGTT
Pseudoalteromonas haloplanktis TAC125
PSHAa1952 fadE -31 5.1 AGGTGGTCTGACCTCTA
PSHAa0966 fadI -33 5.5 AACAGGTCAGACCTGTC
PSHAb0355 tesB -67 4.3 TGCTGGTCTGACAAGTT
PSHAa1410 fadH -18 4.8 CACAGGTTAGACCAGTT
PSHAb0374 fadE2 -22 4.3 ATCTGGTCGGATGAGTT
Pseudoalteromonas tunicata D2
PTD2_11739 fadI -32 5.7 AACAGGTCAGACCTGTA
PTD2_22672 fadE -131 5.6 TAGTGGTCAGACCTCTA
PTD2_19952 fadH -33 4.7 CAGAGGTATGACCAGTA
PTD2_02811 fadE2 -20 4.3 ATCTGGTCGGATGAGTT
PTD2_02881 tesB -66 5.1 AACTGGTCTGACCTTTT
Idiomarina baltica OS145
OS145_01812 fadE -33 5.7 TACTGGTCAGACCTCTA
OS145_12280 fadI -48 4.8 GTGTGGTCAGACCAGTA
Idiomarina loihiensis L2TR
IL1827 fadD -67 4 AACTGGTCGGATATGCG
IL1665 fadE -34 5.5 CACTGGTCAGACCTCCA
IL0994 fadI -42 5.1 TTGTGGTCAGACCAGTA
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