Regulons of Thermotoga naphthophila RKU-10

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	AraR	Arabinose	Arabinose utilization	5	6
TF	ArgR	Arginine	Arginine biosynthesis	2	2
TF	BglR	Cellobiose	Beta-glucosides utilization	1	1
TF	CelR	Cellobiose	Cellobiose utilization	7	5
TF	ChiR	Chitobiose	Chitobiose utilization	2	1
TF	FruR	Fructose-1-phosphate	Fructose utilization	1	1
TF	Fur	Iron ion, (Fe2+)	Iron homeostasis	5	3
TF	GalR	Galactose	Galactosides utilization	2	2
TF	GloR		Fucose-glucose oligosaccharide utilization	3	2
TF	GluR	Glucose	Glucose utilization; Trehalose utilization	2	2
TF	HcpR	Nitric oxide	Nitrosative stress response	2	2
TF	HrcA	Heat shock	Heat shock response	6	5
TF	IolR		Inositol utilization	1	1
TF	KdgR	2-keto-3-deoxygluconate	Glucuronate utilization	6	6
TF	ManR	Mannose	Mannan and beta-mannosides utilization	1	1
TF	NiaR	Niacin	NAD biosynthesis	2	2
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	4	8
TF	PhoB	Inorganic phosphate	Phosphate metabolism	1	1
TF	PuuR	Putrescine	Spermidine biosynthesis	2	2
TF	RbsR	Ribose	Ribose utilization	1	2
TF	Rex	NADH	Energy metabolism	14	14
TF	Rex1	NADH	Energy metabolism	2	1
TF	RhaR	Rhamnose	Rhamnose utilization; Rhamnose oligosaccharides utilization	3	3
TF	TM0766		Hypothetical ABC transporter	1	1
TF	TM1030		Multidrug resistance	1	1
TF	TreR	Trehalose	Trehalose utilization	2	2
TF	UctR		Sugar utilization	1	1
TF	UgpR		Possibly alpha-mannosides utilization	1	1
TF	UgtR		Sugar utilization	1	1
TF	UxaR		Galacturonate utilization; Pectin utilization	3	3
TF	XylR	Xylose; Glucose	Xylose utilization	7	7
TF	ZnuR		Zinc homeostasis	1	1
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	1	1
RNA	Cobalamin	Adenosylcobalamin	Cobalamin biosynthesis	3	1
RNA	FMN	Flavin mononucleotide	Riboflavin biosynthesis	1	1
RNA	L10_leader		Ribosome biogenesis	1	1
RNA	L20_leader		Ribosome biogenesis	1	1
RNA	Lysine	Lysine	Lysine biosynthesis	1	1
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	1	1

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulons of Thermotoga naphthophila RKU-10

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --