# TF - GluR: Tnap_0594
>Tnap_0601(amyE) Score=6 Pos=-52 [Thermotoga naphthophila RKU-10]
ATTTGATTATAACGTCATTTAAT
>Tnap_0597(gluE) Score=6.3 Pos=-133 [Thermotoga naphthophila RKU-10]
ATTTAATTCCTTTGGAAATTAAT
# TF - GalR: Tnap_1576
>Tnap_1576(galR) Score=5.6 Pos=-65 [Thermotoga naphthophila RKU-10]
ACGGTAACGTTTACGT
>Tnap_1577(lacA) Score=5.3 Pos=-28 [Thermotoga naphthophila RKU-10]
CCGTGAACGTTCACGA
# TF - GloR: Tnap_0935
>Tnap_0935(gloR) Score=5.9 Pos=-129 [Thermotoga naphthophila RKU-10]
AACTCAAACGTTTCCGTT
>Tnap_0936(mtlD) Score=5.9 Pos=-55 [Thermotoga naphthophila RKU-10]
AACGGAAACGTTTGAGTT
# TF - AraR: Tnap_0905
>Tnap_0906(araA) Score=6.5 Pos=-62 [Thermotoga naphthophila RKU-10]
ATAAAGGTACGTACTTTTAT
>Tnap_0906(araA) Score=4.7 Pos=-164 [Thermotoga naphthophila RKU-10]
ATAACGGTACGTACCGATGG
>Tnap_0907(araE) Score=6.5 Pos=-150 [Thermotoga naphthophila RKU-10]
ATAAAAGTACGTACCTTTAT
>Tnap_0907(araE) Score=4.7 Pos=-48 [Thermotoga naphthophila RKU-10]
CCATCGGTACGTACCGTTAT
>Tnap_0910(glsA) Score=5 Pos=-55 [Thermotoga naphthophila RKU-10]
GATAATATACGTACCTAAAT
>Tnap_0913(Tnap_0913) Score=4.9 Pos=-56 [Thermotoga naphthophila RKU-10]
TATAATGTACGTACCTATCA
# TF - BglR: Tnap_0663
>Tnap_0663(bglR) Score=6.8 Pos=-45 [Thermotoga naphthophila RKU-10]
AATTTCTTTCTGAGGAAGATAGA
# TF - UgpR: Tnap_0613
>Tnap_0613(ugpR) Score=6.5 Pos=-30 [Thermotoga naphthophila RKU-10]
ATATGTAAGCGCTTACAGGA
# TF - HcpR: Tnap_1598
>Tnap_1598(hcpR) Score=6.3 Pos=-28 [Thermotoga naphthophila RKU-10]
TCTGTAACAATTGTTACGAG
>Tnap_1597(hcp) Score=6.3 Pos=-81 [Thermotoga naphthophila RKU-10]
CTCGTAACAATTGTTACAGA
# TF - HrcA: Tnap_0076
>Tnap_0168(dnaK) Score=5.9 Pos=-179 [Thermotoga naphthophila RKU-10]
TTATCATTCAAAAGTTTCATTTGCTAT
>Tnap_0286(groS) Score=6.1 Pos=-48 [Thermotoga naphthophila RKU-10]
TTAGCAGTCAGACGATGAGAGTGCTAA
>Tnap_0165(TM0370) Score=6.4 Pos=-49 [Thermotoga naphthophila RKU-10]
TTATCAAACGAAAAAAATGATTGCTAA
>Tnap_0054(clpA) Score=6.6 Pos=-51 [Thermotoga naphthophila RKU-10]
TTATCAAACGTAATATTTGAGTGCTAA
>Tnap_0076(hrcA) Score=6.5 Pos=-30 [Thermotoga naphthophila RKU-10]
TTAGCACTCAAAAGAAGGGAGTGCTAA
# TF - IolR: Tnap_0203
>Tnap_0203(iolR) Score=6.3 Pos=-40 [Thermotoga naphthophila RKU-10]
GTTGGTTAGTAAATGAAAACAAA
# TF - KdgR: Tnap_0695
>Tnap_0695(kdgR) Score=5.9 Pos=-88 [Thermotoga naphthophila RKU-10]
TTTGAAAATGGTTTTCTCA
>Tnap_0694(uxaC) Score=5.9 Pos=-32 [Thermotoga naphthophila RKU-10]
TGAGAAAACCATTTTCAAA
>Tnap_0701(xloE) Score=5.2 Pos=-135 [Thermotoga naphthophila RKU-10]
TTTGAAATAATCTTTTACA
>Tnap_0700(xynB) Score=5.2 Pos=-103 [Thermotoga naphthophila RKU-10]
TGTAAAAGATTATTTCAAA
>Tnap_0691(xynA1) Score=6 Pos=-138 [Thermotoga naphthophila RKU-10]
TTTGAAAGTTCCTTTCACA
>Tnap_0690(xtpF) Score=6 Pos=-198 [Thermotoga naphthophila RKU-10]
TGTGAAAGGAACTTTCAAA
# TF - CelR: Tnap_1574
>Tnap_1285(cel12A) Score=5.9 Pos=119 [Thermotoga naphthophila RKU-10]
ATGtAAAcATTTTCAT
>Tnap_0603(cbpA) Score=5.9 Pos=-59 [Thermotoga naphthophila RKU-10]
ATGAAAACATTTTCAG
>Tnap_0947(celQ) Score=5.6 Pos=-48 [Thermotoga naphthophila RKU-10]
GTGAAAACAGTTTCAT
>Tnap_1569(celE) Score=5.7 Pos=-70 [Thermotoga naphthophila RKU-10]
ATGTAAACATTTTCAC
>Tnap_0951(TM0312) Score=5.8 Pos=-58 [Thermotoga naphthophila RKU-10]
ATGAAAACATTTTCAA
# TF - ManR: Tnap_1568
>Tnap_1565(manB) Score=7.5 Pos=-38 [Thermotoga naphthophila RKU-10]
AAATAAGTAAAGTTTACTAATTA
# TF - NiaR: Tnap_1205
>Tnap_1205(niaR) Score=6.9 Pos=-30 [Thermotoga naphthophila RKU-10]
TTTACAGCAGGTGTAAA
>Tnap_1163(nadB) Score=6.9 Pos=-39 [Thermotoga naphthophila RKU-10]
TTTACAGCAGGTGTAAA
# TF - NrdR: Tnap_1099
>Tnap_0782(TM0152) Score=3.8 Pos=-109 [Thermotoga naphthophila RKU-10]
ATACTACAAAATGTAC
>Tnap_0177(nrdG) Score=4.1 Pos=-85 [Thermotoga naphthophila RKU-10]
CAACAATTTTTTGAGA
>Tnap_0177(nrdG) Score=5.3 Pos=-55 [Thermotoga naphthophila RKU-10]
CCACAATATATTGTGG
>Tnap_0748(nrdJ) Score=4.3 Pos=-64 [Thermotoga naphthophila RKU-10]
CTACCAAATGTTGAAT
>Tnap_0748(nrdJ) Score=5 Pos=-34 [Thermotoga naphthophila RKU-10]
ACACAATATGTTGTTA
>Tnap_1512(metE) Score=4.8 Pos=-55 [Thermotoga naphthophila RKU-10]
ACACAACATGTGGTAT
>Tnap_0782(TM0152) Score=4.6 Pos=-140 [Thermotoga naphthophila RKU-10]
ATACAATATACGGTAT
>Tnap_1512(metE) Score=4.3 Pos=-25 [Thermotoga naphthophila RKU-10]
ATACAACAAATGGAGG
# TF - RbsR: Tnap_1791
>Tnap_1790(rbsK) Score=6.5 Pos=-56 [Thermotoga naphthophila RKU-10]
TTGTGAAAACGATTTCGAAA
>Tnap_1790(rbsK) Score=6.6 Pos=-44 [Thermotoga naphthophila RKU-10]
TTTCGAAAACGTTTTCAAAG
# TF - Rex1: Tnap_1384
>Tnap_1390(TM1420) Score=6.6 Pos=-101 [Thermotoga naphthophila RKU-10]
TTGTGAAGTAGGTAACAA
# TF - Rex: Tnap_0799
>Tnap_1770(TM0983) Score=4.7 Pos=-63 [Thermotoga naphthophila RKU-10]
ATGTTATCATTTTCACAA
>Tnap_1013(cas6) Score=4.9 Pos=-40 [Thermotoga naphthophila RKU-10]
ATGATAAAATTATCACAA
>Tnap_0810(TM0179) Score=4.6 Pos=-30 [Thermotoga naphthophila RKU-10]
TTGTTATAATAGTAACAA
>Tnap_0182(noxE) Score=4.8 Pos=-32 [Thermotoga naphthophila RKU-10]
TCGTGAAAAAATTCTCTT
>Tnap_0857(hycE) Score=5.3 Pos=-30 [Thermotoga naphthophila RKU-10]
TTGTGAAATTTTTGACGA
>Tnap_0643(hycA) Score=5 Pos=-44 [Thermotoga naphthophila RKU-10]
TTGTGAAAAAATTCCCGA
>Tnap_0482(dnaX) Score=5.1 Pos=-104 [Thermotoga naphthophila RKU-10]
TAGTTATTTTTTTCACGA
>Tnap_0831(hycD) Score=5.3 Pos=-54 [Thermotoga naphthophila RKU-10]
TTGAGAAATTTATCACAA
>Tnap_0992(adhA) Score=5 Pos=-100 [Thermotoga naphthophila RKU-10]
GTGAGAAAATTTTCACAA
>Tnap_0992(adhA) Score=4.7 Pos=-76 [Thermotoga naphthophila RKU-10]
TTGTTATGAAATTCACAA
>Tnap_1403(sat) Score=5.1 Pos=-47 [Thermotoga naphthophila RKU-10]
TAGTTAAAAAAATAACAA
>Tnap_1222(TM1586) Score=4.9 Pos=-177 [Thermotoga naphthophila RKU-10]
GAGTAAAATATTTCACAA
>Tnap_1390(TM1420) Score=5 Pos=-51 [Thermotoga naphthophila RKU-10]
TaGTGAAAAaTaTaACgt
>Tnap_0643(hycA) Score=4.3 Pos=-69 [Thermotoga naphthophila RKU-10]
ATGTGAAAAAAATATCAG
# TF - RhaR: Tnap_1698
>Tnap_1697(rhaM2) Score=6.7 Pos=-57 [Thermotoga naphthophila RKU-10]
TTGTGATTAATTTATGATAA
>Tnap_1699(Tnap_1699) Score=5.7 Pos=-42 [Thermotoga naphthophila RKU-10]
ATTAGATAAATTTATGATAA
>Tnap_1698(rhaR) Score=4.4 Pos=-72 [Thermotoga naphthophila RKU-10]
TTATCATAAATTAATCACAA
# TF - TM1030: Tnap_1734
>Tnap_1736(TM1028) Score=7.1 Pos=-34 [Thermotoga naphthophila RKU-10]
ATTTGACTGACCAGTCAATC
# TF - TreR: Tnap_0185
>Tnap_0601(amyE) Score=5.9 Pos=-143 [Thermotoga naphthophila RKU-10]
TTATTTTCATTTAACGAAAAAAA
>Tnap_0184(treT) Score=6.1 Pos=-38 [Thermotoga naphthophila RKU-10]
ATTAATTCAAGTTACGAATAAAT
# TF - UxaR: Tnap_0221
>Tnap_0217(uxaP) Score=6.4 Pos=-88 [Thermotoga naphthophila RKU-10]
TAAAACATCACATATCT
>Tnap_0214(uxaX) Score=6.3 Pos=-35 [Thermotoga naphthophila RKU-10]
TGAAATATCACACATCT
>Tnap_0696(kdgA) Score=6.2 Pos=-29 [Thermotoga naphthophila RKU-10]
TTAAACATCACATATCA
# TF - XylR: Tnap_0740
>Tnap_0701(xloE) Score=5.8 Pos=-53 [Thermotoga naphthophila RKU-10]
AATATTTCCCGAAAGGAAAAAAT
>Tnap_0700(xynB) Score=5.8 Pos=-189 [Thermotoga naphthophila RKU-10]
ATTTTTTCCTTTCGGGAAATATT
>Tnap_0691(xynA1) Score=5.8 Pos=-87 [Thermotoga naphthophila RKU-10]
ATTTTTTCTTTACAAAAAATAAC
>Tnap_0690(xtpF) Score=5.8 Pos=-253 [Thermotoga naphthophila RKU-10]
GTTATTTTTTGTAAAGAAAAAAT
>Tnap_0948(xtpN) Score=4.9 Pos=-13 [Thermotoga naphthophila RKU-10]
gaaATTTCTTtAgtgaAAAaAAT
>Tnap_0740(xylR) Score=5.2 Pos=-61 [Thermotoga naphthophila RKU-10]
ATTATTTCCCGCATATAATTAAT
>Tnap_1139(xylA) Score=5 Pos=-38 [Thermotoga naphthophila RKU-10]
ATAATTGATTGATAGAAAAAATT
# TF - Zur: Tnap_0752
>Tnap_0752(zur) Score=7 Pos=-31 [Thermotoga naphthophila RKU-10]
TTGCAAATGCTTTGCATTTGCAG
# TF - ChiR: Tnap_0121
>Tnap_0121(chiR) Score=7 Pos=-43 [Thermotoga naphthophila RKU-10]
AAGTTGTTTGCAGCATGCAACTA
# TF - Fur: Tnap_1038
>Tnap_0680(feoA) Score=6.4 Pos=-35 [Thermotoga naphthophila RKU-10]
TTTGAGAATCATTCTCAAA
>Tnap_0122(tdxH) Score=5.6 Pos=-57 [Thermotoga naphthophila RKU-10]
ATTGAGAATGGATATCAAA
>Tnap_0175(bcp) Score=6 Pos=-37 [Thermotoga naphthophila RKU-10]
ATTGAGAATTAGTTTCAAC
# TF - ZnuR: Tnap_0756
>Tnap_0752(zur) Score=6.9 Pos=-143 [Thermotoga naphthophila RKU-10]
TATACCATAATACGGTATA
# TF - ArgR: Tnap_0166
>Tnap_0166(argR) Score=6.7 Pos=-60 [Thermotoga naphthophila RKU-10]
ATATTTATGCTATATATAT
>Tnap_1035(argG) Score=6.7 Pos=-37 [Thermotoga naphthophila RKU-10]
ATAATTATGCTATCAAGAA
# TF - UgtR: Tnap_1564
>Tnap_1557(ugtE) Score=6.2 Pos=-59 [Thermotoga naphthophila RKU-10]
GTAGAAAATTTTCTAT
# TF - PhoB: Tnap_1535
>Tnap_1530(pstS) Score=7.7 Pos=-89 [Thermotoga naphthophila RKU-10]
CTTAACA---CTTAACA
# TF - UctR: Tnap_0962
>Tnap_0961(uctP) Score=6.5 Pos=-34 [Thermotoga naphthophila RKU-10]
GAAAAAAATATTTTTAAC
# TF - FruR: Tnap_0927
>Tnap_0927(fruR) Score=4.2 Pos=-61 [Thermotoga naphthophila RKU-10]
ATCATAATACGTCATAATCAGTCATGAACCGATCACAA
# TF - TM0766: Tnap_0564
>Tnap_0564(TM0766) Score=7.4 Pos=-35 [Thermotoga naphthophila RKU-10]
GTGTAATAGTATAATATTACAG
# RNA - FMN
>Tnap_0999(ribD) Score=115.1 Pos=-180 [Thermotoga naphthophila RKU-10]
AACGCTCTCGGGGCAGGGTGGAATTCCCGACCGGCGGTGAAAGCCCGCGAGCCCTCTCAGGAGGGTTGACCCGGTGGAATTCCGGGGCCGACGGTGAAAGTCCGGATGGGAGAGAGCGTGATG
# RNA - TPP
>Tnap_0143(thi4) Score=69.8 Pos=-162 [Thermotoga naphthophila RKU-10]
AACCTTCCCCAGGGGGAGCTCCTATTCCGGGGCTGAGAGGAGGACGGAAGTCCTCGACCCCAAGAACCTGATCCGGGTAATGCCGGCGGAGGGATCGGGGAAGGAGGAAAT
# RNA - Cobalamin
>Tnap_0710(btuF) Score=93 Pos=-238 [Thermotoga naphthophila RKU-10]
GAAGCCTCCCTCACCGTGCGGTACCCTTCGGGGTTCAAAGGGGAAGCCGGTGGAAATCCGGCGCGGGGCCGCCACCGTGACCGGGGACGAAACCCGCAGAACGCCACTGGGGCGATCACCCTGGGAAGGTGCGGGGAGTAGGATGATCCGGAAGCCGGGAAACCCGCCCGCGGTGAAGGGAAACCA
# RNA - Lysine
>Tnap_1286(asd) Score=85.6 Pos=-266 [Thermotoga naphthophila RKU-10]
GACCCGACGGAGGCGCGCCCGAGATGAGTAGGCTGTCCCATCAGGGGAGGAATCGGGGACGGCTGAAAGGCGAGGGGCGCCGAAGGGTGCAGAGTTCCTCCCGCTCTGCATGCCTGGGGGTATGGGGAATACCCATACCACTGTCACGGAGGTCTCTCCGTGGAGAGCCGATCGGGT
# RNA - L10_leader
>Tnap_0238(rplJ) Score=40.2 Pos=-134 [Thermotoga naphthophila RKU-10]
GAAAACTCAATAAGACGCCGTAGATGGCAGGGCCCTTGGGGTTAAAGATCCTGCCGGAGGCGTCCCAGAAAGGTTCTATGACCTTTTTGTGGACCCTCCGGGGTCCACAAAATTTTTTTTGGGAGGTG
# RNA - L20_leader
>Tnap_1218(infC) Score=46 Pos=-137 [Thermotoga naphthophila RKU-10]
AAAAAGCAAGTGGAGGCCAGCCCGGCTTCCCACCCTGGGGCAAGAGGCTACCAGGGTAAATATCCCTGAAAGATTCAGCTTCAAGGGGAAGCGGGCTTTTTGCCCGCTATTTTTTATGACT
# TF - PuuR: Tnap_0452
>Tnap_0452(puuR) Score=4.8 Pos=-58 [Thermotoga naphthophila RKU-10]
ATGTCTGTGATACTGAACAA
>Tnap_0452(puuR) Score=6.8 Pos=-36 [Thermotoga naphthophila RKU-10]
TTGTCAACTATAGTGGACAA