Regulon of TreR in Thermotoga naphthophila RKU-10
| Regulator type: | Transcription factor |
| TF locus tag: | Tnap_0185 |
| Regulator family: | ROK |
| Regulation mode: | repressor |
| Biological process: | Trehalose utilization |
| Effector: | Trehalose |
| Regulog: | TreR - Thermotogales |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 2 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Thermotogales
- By TF family - ROK
- By effector - Trehalose
- By pathway - Trehalose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -38
Score: 6.1 Sequence: ATTAATTCAAGTTACGAATAAAT
Locus tag: Tnap_0184
Name: treT Funciton: Trehalose synthase, nucleoside diphosphate glucose dependent
Locus tag: Tnap_0185
Name: treR Funciton: Regulator of trehalose utilization TreR, ROK family |
|||
|
treT
|
Trehalose synthase, nucleoside diphosphate glucose dependent
|
||
|
treR
|
Regulator of trehalose utilization TreR, ROK family
|
||
|
Position: -143
Score: 5.9 Sequence: TTATTTTCATTTAACGAAAAAAA
Locus tag: Tnap_0601
Name: amyE Funciton: extracellular alpha-amylase precursor
Locus tag: Tnap_0600
Name: treE Funciton: Trehalose ABC transporter, substrate-binding component
Locus tag: Tnap_0599
Name: treF Funciton: Trehalose ABC transporter, permease component 1
Locus tag: Tnap_0598
Name: treG Funciton: Trehalose ABC transporter, permease component 2 |
|||
|
amyE
|
extracellular alpha-amylase precursor
|
||
|
treE
|
Trehalose ABC transporter, substrate-binding component
|
||
|
treF
|
Trehalose ABC transporter, permease component 1
|
||
|
treG
|
Trehalose ABC transporter, permease component 2
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |