Regulon of CelR in Thermotoga naphthophila RKU-10

Properties
Regulator type:	Transcription factor
TF locus tag:	Tnap_1574
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Cellobiose utilization
Effector:	Cellobiose
Regulog:	CelR - Thermotogales
Statistics of regulated genes:
- Genes	13
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 31 sites [see more]

Member of regulog collections

By taxonomy - Thermotogales
By TF family - LacI
By effector - Cellobiose
By pathway - Cellobiose utilization

Regulated operons
	Locus Tag	Name	Function
Position: -48 Score: 5.6 Sequence: GTGAAAACAGTTTCAT Locus tag: Tnap_0947 Name: celQ Funciton: Putative alpha-glucosidase (EC 3.2.1.-)
	Tnap_0947	celQ	Putative alpha-glucosidase (EC 3.2.1.-)
Position: -70 Score: 5.7 Sequence: ATGTAAACATTTTCAC Locus tag: Tnap_1569 Name: celE Funciton: Predicted cellobiose ABC transport system, sugar-binding protein Locus tag: Tnap_1570 Name: celF Funciton: Predicted cellobiose ABC transport system, permease protein 1 Locus tag: Tnap_1571 Name: celG Funciton: Predicted cellobiose ABC transport system, permease protein 2 Locus tag: Tnap_1572 Name: celK Funciton: Predicted cellobiose ABC transport system, ATP-binding protein 1 Locus tag: Tnap_1573 Name: celL Funciton: Predicted cellobiose ABC transport system, ATP-binding protein 2 Locus tag: Tnap_1574 Name: celR Funciton: Predicted regulator of cellobiose and glucan utilization, LacI family
	Tnap_1569	celE	Predicted cellobiose ABC transport system, sugar-binding protein
	Tnap_1570	celF	Predicted cellobiose ABC transport system, permease protein 1
	Tnap_1571	celG	Predicted cellobiose ABC transport system, permease protein 2
	Tnap_1572	celK	Predicted cellobiose ABC transport system, ATP-binding protein 1
	Tnap_1573	celL	Predicted cellobiose ABC transport system, ATP-binding protein 2
	Tnap_1574	celR	Predicted regulator of cellobiose and glucan utilization, LacI family
Position: -58 Score: 5.8 Sequence: ATGAAAACATTTTCAA Locus tag: Tnap_0951 Name: TM0312 Funciton: Predicted dehydrogenase in CelR regulon, COG0673 Locus tag: Tnap_0952 Name: TM0313 Funciton: Predicted aldo/keto reductase in CelR regulon, COG4989
	Tnap_0951	TM0312	Predicted dehydrogenase in CelR regulon, COG0673
	Tnap_0952	TM0313	Predicted aldo/keto reductase in CelR regulon, COG4989
Position: -59 Score: 5.9 Sequence: ATGAAAACATTTTCAG Locus tag: Tnap_0603 Name: cbpA Funciton: Cellobiose phosphorylase (EC 2.4.1.-) Locus tag: Tnap_0602 Name: bglA Funciton: Beta-glucosidase A (EC 3.2.1.21)
	Tnap_0603	cbpA	Cellobiose phosphorylase (EC 2.4.1.-)
	Tnap_0602	bglA	Beta-glucosidase A (EC 3.2.1.21)
Position: 119 Score: 5.9 Sequence: ATGtAAAcATTTTCAT Locus tag: Tnap_1285 Name: cel12A Funciton: cytoplasmic endo-1,4-beta-glucanase (EC 3.2.1.4) Locus tag: Tnap_1284 Name: cel12B Funciton: extracellular endo-1,4-beta-glucanase (EC 3.2.1.4)
	Tnap_1285	cel12A	cytoplasmic endo-1,4-beta-glucanase (EC 3.2.1.4)
	Tnap_1284	cel12B	extracellular endo-1,4-beta-glucanase (EC 3.2.1.4)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD