Regulon of CelR in Thermotoga naphthophila RKU-10
| Regulator type: | Transcription factor |
| TF locus tag: | Tnap_1574 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Cellobiose utilization |
| Effector: | Cellobiose |
| Regulog: | CelR - Thermotogales |
| Statistics of regulated genes: | |
| - Genes | 13 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Thermotogales
- By TF family - LacI
- By effector - Cellobiose
- By pathway - Cellobiose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -48
Score: 5.6 Sequence: GTGAAAACAGTTTCAT
Locus tag: Tnap_0947
Name: celQ Funciton: Putative alpha-glucosidase (EC 3.2.1.-) |
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celQ
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Putative alpha-glucosidase (EC 3.2.1.-)
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Position: -70
Score: 5.7 Sequence: ATGTAAACATTTTCAC
Locus tag: Tnap_1569
Name: celE Funciton: Predicted cellobiose ABC transport system, sugar-binding protein
Locus tag: Tnap_1570
Name: celF Funciton: Predicted cellobiose ABC transport system, permease protein 1
Locus tag: Tnap_1571
Name: celG Funciton: Predicted cellobiose ABC transport system, permease protein 2
Locus tag: Tnap_1572
Name: celK Funciton: Predicted cellobiose ABC transport system, ATP-binding protein 1
Locus tag: Tnap_1573
Name: celL Funciton: Predicted cellobiose ABC transport system, ATP-binding protein 2
Locus tag: Tnap_1574
Name: celR Funciton: Predicted regulator of cellobiose and glucan utilization, LacI family |
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celE
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Predicted cellobiose ABC transport system, sugar-binding protein
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celF
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Predicted cellobiose ABC transport system, permease protein 1
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celG
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Predicted cellobiose ABC transport system, permease protein 2
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celK
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Predicted cellobiose ABC transport system, ATP-binding protein 1
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celL
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Predicted cellobiose ABC transport system, ATP-binding protein 2
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celR
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Predicted regulator of cellobiose and glucan utilization, LacI family
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Position: -58
Score: 5.8 Sequence: ATGAAAACATTTTCAA
Locus tag: Tnap_0951
Name: TM0312 Funciton: Predicted dehydrogenase in CelR regulon, COG0673
Locus tag: Tnap_0952
Name: TM0313 Funciton: Predicted aldo/keto reductase in CelR regulon, COG4989 |
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TM0312
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Predicted dehydrogenase in CelR regulon, COG0673
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TM0313
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Predicted aldo/keto reductase in CelR regulon, COG4989
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Position: -59
Score: 5.9 Sequence: ATGAAAACATTTTCAG
Locus tag: Tnap_0603
Name: cbpA Funciton: Cellobiose phosphorylase (EC 2.4.1.-)
Locus tag: Tnap_0602
Name: bglA Funciton: Beta-glucosidase A (EC 3.2.1.21) |
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cbpA
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Cellobiose phosphorylase (EC 2.4.1.-)
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bglA
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Beta-glucosidase A (EC 3.2.1.21)
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Position: 119
Score: 5.9 Sequence: ATGtAAAcATTTTCAT
Locus tag: Tnap_1285
Name: cel12A Funciton: cytoplasmic endo-1,4-beta-glucanase (EC 3.2.1.4)
Locus tag: Tnap_1284
Name: cel12B Funciton: extracellular endo-1,4-beta-glucanase (EC 3.2.1.4) |
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cel12A
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cytoplasmic endo-1,4-beta-glucanase (EC 3.2.1.4)
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cel12B
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extracellular endo-1,4-beta-glucanase (EC 3.2.1.4)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |