Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulons of Pseudomonas aeruginosa PAO1

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF BirA Biotin Biotin biosynthesis 2 1
TF CadR-PbrR Lead ion, (Pb2+); Cadmium, ion (Cd2+) Lead resistance; Cadmium resistance 2 1
TF CueR Copper ion, (Cu+) Copper resistance 3 2
TF DesT Unsaturated acyl-CoA; Unsaturated acyl-ACP Fatty acid biosynthesis 2 2
TF EutR Ethanolamine Ethanolamine utilization 1 1
TF FabR2 Unsaturated acyl-ACP; Unsaturated acyl-CoA Fatty acid biosynthesis 2 2
TF FruR Fructose-1-phosphate; Fructose-1,6-diphosphate Fructose utilization 2 2
TF GcvR Glycine Glycine metabolism 2 3
TF GlcC Glycolate Glycolate utilization 2 4
TF GntR Gluconate Gluconate utilization 3 5
TF HexR 2-keto-3-deoxy-6-phosphogluconate Central carbohydrate metabolism 5 4
TF HexR1 2-keto-3-deoxy-6-phosphogluconate Central carbohydrate metabolism 4 5
TF HmgR Homogentisate Tyrosine degradation 2 2
TF HutC cis-Urocanic acid Histidine utilization 4 3
TF HypR Proline; 4-hydroxyproline Proline and 4-hydrohyproline utilization 3 3
TF IscR Iron-sulfur cluster redox state Iron-sulfur cluster biogenesis 2 2
TF LexA DNA damage SOS response 15 12
TF LiuR Branched-chain amino acid degradation 2 4
TF LldR L-lactate Lactate utilization 2 2
TF MetR Homocysteine Methionine biosynthesis 5 4
TF ModE Molybdate Molybdenum homeostasis 2 1
TF NagQ N-acetylglucosamine N-acetylglucosamine utilization 1 2
TF NorR Nitric oxide Nitrosative stress response 2 6
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 4 7
TF NrtR Adenosine diphosphate ribose NAD biosynthesis 2 2
TF NtrC Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 6 5
TF PA0268 1 1
TF PA1520 Xanthine utilization; Allantoin utilization 10 20
TF PA2100 Multidrug efflux 1 1
TF PA2299 Alkanesulfonates utilization 1 1
TF PdxR Pyridoxine/pyridoxal homeostasis 1 1
TF PdxW2 Pyridoxal-5-phosphate Pyridoxine biosynthesis 2 1
TF PhhR Tyrosine; Phenylalanine Aromatic amino acid metabolism 3 6
TF PhnF Phosphonate utilization 1 1
TF PhnR Phosphonate utilization; 2-aminoethylphosphonate utilization 7 9
TF PhrR Blue light; Adenosylcobalamin Light-dependent DNA repair 4 2
TF PrpR 2-methylcitrate Methylcitrate utilization 2 2
TF PsrA Oleate Fatty acid degradation 9 9
TF PtxS 2-keto-D-gluconate 2-ketogluconate utilization 2 2
TF RbsR Ribose Ribose utilization 2 1
TF RutR Uracil Pyrimidine utilization 7 4
TF RutR2 Uracil Pyrimidine utilization 2 2
TF RutR3 Uracil Pyrimidine utilization 4 3
TF SahR S-adenosylhomocysteine Methionine metabolism 1 1
TF SdaR D-glycerate Glycerate utilization 2 1
TF SoxR Paraquat Superoxide stress response 4 4
TF UreR 1 2
TF VanR Vanillate Vanillate utilization 2 4
TF YdcR 4 2
TF YjiR 1 1
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 11 10
RNA Cobalamin Adenosylcobalamin Cobalamin biosynthesis 6 5
RNA FMN Flavin mononucleotide Riboflavin biosynthesis 1 1
RNA S15 Ribosome biogenesis 1 1
RNA SAH_riboswitch S-adenosylhomocysteine Methionine metabolism 1 1
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 1 1
RNA mini-ykkC Multidrug resistance 2 2
RNA yybP-ykoY 2 2
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