Regulon of PhnR in Pseudomonas aeruginosa PAO1
| Regulator type: | Transcription factor |
| TF locus tag: | PA2802, PA3249, PA1142 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Phosphonate utilization; 2-aminoethylphosphonate utilization |
| Effector: | |
| Regulog: | PhnR - Pseudomonadaceae |
| Statistics of regulated genes: | |
| - Genes | 14 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - PhnR
- By taxonomy - Pseudomonadaceae
- By TF family - GntR/Others
- By pathway - Phosphonate utilization
- By pathway - 2-aminoethylphosphonate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -282
Score: 4.7 Sequence: TGGTCTAGATCA
Position: -27
Score: 5.4 Sequence: TGGACTAGACCA
Locus tag: PA3249
Name: phnR Funciton: 2-aminoethylphosphonate uptake and metabolism regulator, GntR family |
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phnR
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2-aminoethylphosphonate uptake and metabolism regulator, GntR family
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Position: -348
Score: 5.3 Sequence: TGGTCTAGTCCA
Position: -93
Score: 5.4 Sequence: TGATCTAGACCA
Locus tag: PA3250
Name: phnS Funciton: 2-aminoethylphosphonate ABC transporter, periplasmic binding component (TC 3.A.1.9.1)
Locus tag: PA3251
Name: PF01663 Funciton: type I phosphodiesterase
Locus tag: PA3252
Name: phnU Funciton: 2-aminoethylphosphonate ABC transporter, permease protein I (TC 3.A.1.9.1)
Locus tag: PA3253
Name: phnV Funciton: 2-aminoethylphosphonate ABC transporter, permease protein II (TC 3.A.1.9.1)
Locus tag: PA3254
Name: phnT Funciton: 2-aminoethylphosphonate ABC transporter, ATP-binding protein (TC 3.A.1.9.1)
Locus tag: PA3255
Name: COG0560 Funciton: Phosphoserine phosphatase (EC 3.1.3.3) |
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phnS
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2-aminoethylphosphonate ABC transporter, periplasmic binding component (TC 3.A.1.9.1)
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PF01663
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type I phosphodiesterase
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phnU
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2-aminoethylphosphonate ABC transporter, permease protein I (TC 3.A.1.9.1)
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phnV
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2-aminoethylphosphonate ABC transporter, permease protein II (TC 3.A.1.9.1)
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phnT
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2-aminoethylphosphonate ABC transporter, ATP-binding protein (TC 3.A.1.9.1)
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COG0560
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Phosphoserine phosphatase (EC 3.1.3.3)
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Position: -114
Score: 4.8 Sequence: TGGTCTAGGCCA
Locus tag: PA2802
Name: phnR3 Funciton: 2-aminoethylphosphonate uptake and metabolism regulator, GntR family |
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phnR3
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2-aminoethylphosphonate uptake and metabolism regulator, GntR family
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Position: -31
Score: 5.3 Sequence: TGGCCTAGACCA
Locus tag: PA2803
Name: phnX Funciton: Phosphonoacetaldehyde hydrolase (EC 3.11.1.1)
Locus tag: PA2804
Name: COG4341 Funciton: COG4341: Predicted HD phosphohydrolase |
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phnX
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Phosphonoacetaldehyde hydrolase (EC 3.11.1.1)
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COG4341
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COG4341: Predicted HD phosphohydrolase
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Position: -263
Score: 5.4 Sequence: TGGTCTAGACCA
Position: -84
Score: 5.3 Sequence: TGGCCTAGACCA
Locus tag: PA1144
Name: null Funciton: probable MFS transporter
Locus tag: PA1143
Name: COG0560 Funciton: Phosphoserine phosphatase (EC 3.1.3.3)
Locus tag: PA1142
Name: phnR2 Funciton: 2-aminoethylphosphonate uptake and metabolism regulator, GntR family |
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probable MFS transporter
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COG0560
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Phosphoserine phosphatase (EC 3.1.3.3)
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phnR2
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2-aminoethylphosphonate uptake and metabolism regulator, GntR family
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Position: -50
Score: 4.7 Sequence: TGGACGAGACCA
Locus tag: PA3255
Name: COG0560 Funciton: Phosphoserine phosphatase (EC 3.1.3.3) |
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COG0560
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Phosphoserine phosphatase (EC 3.1.3.3)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |