Profile of regulator PhnR in Pseudomonadaceae
Properties
| Regulator family: |
GntR/Others |
| Regulation mode: |
repressor |
| Biological process: |
Phosphonate utilization; 2-aminoethylphosphonate utilization |
| Effector: |
|
| Regulog: |
PhnR - Pseudomonadaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Pseudomonas aeruginosa PAO1
|
|
PA2802 |
phnR3 |
-114 |
4.8 |
TGGTCTAGGCCA |
|
PA3250 |
phnS |
-348 |
5.3 |
TGGTCTAGTCCA |
|
PA3249 |
phnR |
-27 |
5.4 |
TGGACTAGACCA |
|
PA3250 |
phnS |
-93 |
5.4 |
TGATCTAGACCA |
|
PA3249 |
phnR |
-282 |
4.7 |
TGGTCTAGATCA |
|
PA1144 |
null |
-263 |
5.4 |
TGGTCTAGACCA |
|
PA1144 |
null |
-84 |
5.3 |
TGGCCTAGACCA |
|
PA3255 |
COG0560 |
-50 |
4.7 |
TGGACGAGACCA |
|
PA2803 |
phnX |
-31 |
5.3 |
TGGCCTAGACCA |
|
Pseudomonas entomophila L48
|
|
PSEEN1439 |
phnR |
-261 |
4.1 |
TGGTCTAGGTCA |
|
PSEEN1439 |
phnR |
-27 |
5.3 |
TGGACTAGTCCA |
|
PSEEN1438 |
phnS |
-310 |
5.3 |
TGGACTAGTCCA |
|
PSEEN1438 |
phnS |
-76 |
5.3 |
TGACCTAGACCA |
|
Pseudomonas putida KT2440
|
|
PP1727 |
phnR |
-28 |
5.3 |
TGGACTAGTCCA |
|
PP1727 |
phnR |
-251 |
4.1 |
TGGTCTAGGTCA |
|
PP1726 |
phnS |
-311 |
5.3 |
TGGACTAGTCCA |
|
PP1726 |
phnS |
-88 |
5.3 |
TGACCTAGACCA |
|
Pseudomonas syringae pv. tomato str. DC3000
|
|
PSPTO3877 |
phnR |
-304 |
4.7 |
TGGTCTAGATCA |
|
PSPTO3877 |
phnR |
-24 |
5.3 |
TGGTCTAGTCCA |
|
PSPTO3878 |
phnS |
-345 |
5.4 |
TGGACTAGACCA |
|
PSPTO3878 |
phnS |
-65 |
5.4 |
TGATCTAGACCA |
|
Pseudomonas fluorescens Pf-5
|
|
PFL_4386 |
phnR |
-305 |
4.1 |
TGGTCTAGGTCA |
|
PFL_4386 |
phnR |
-26 |
5.3 |
TGGTCTAGTCCA |
|
PFL_4387 |
phnS |
-348 |
5.4 |
TGGACTAGACCA |
|
PFL_4387 |
phnS |
-69 |
5.3 |
TGACCTAGACCA |
|
Pseudomonas mendocina ymp
|
|
Pmen_1333 |
phnR |
-289 |
4.7 |
TGGTCTAGATCA |
|
Pmen_1333 |
phnR |
-27 |
5.3 |
TGGACTAGTCCA |
|
Pmen_1332 |
phnS |
-300 |
5.3 |
TGGACTAGTCCA |
|
Pmen_1332 |
phnS |
-38 |
5.4 |
TGATCTAGACCA |
|
Pmen_1925 |
phnX |
-29 |
4.8 |
TGGACTAGGCCA |
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Regulatory Sites
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