Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NrdR in Pseudomonas aeruginosa PAO1

Properties
Regulator type: Transcription factor
TF locus tag: PA4057
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Regulog: NrdR - Pseudomonadaceae
Statistics of regulated genes:
- Genes 7
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 35 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -57
Score: 5.1
Sequence: CCACAACATATTGTTG
Position: -26
Score: 4.5
Sequence: ACACATCATGTTGTGG
Locus tag: PA1920
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: PA1919
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD
Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
nrdG
Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)

Position: -38
Score: 4.6
Sequence: ACACAAGATATTGATT
Position: -7
Score: 4.6
Sequence: TAACTAGATGTTGCGT
Locus tag: PA5497
Name: nrdJb
Funciton: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
Locus tag: PA5496
Name: nrdJa
Funciton: Ribonucleotide reductase of class II (coenzyme B12-dependent), alpha subunit (EC 1.17.4.1)
nrdJb
Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
nrdJa
Ribonucleotide reductase of class II (coenzyme B12-dependent), alpha subunit (EC 1.17.4.1)

Position: -398
Score: 4.9
Sequence: CCCCTATATCTTGGGT
Position: -194
Score: 5
Sequence: CCACTAGGTATTGTGT
Locus tag: PA1156
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: PA1155
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdA
Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
nrdB
Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)

Position: -76
Score: 5.7
Sequence: CCACTATATATAGCGG
Locus tag: PA3011
Name: topA
Funciton: DNA topoisomerase I (EC 5.99.1.2)
topA
DNA topoisomerase I (EC 5.99.1.2)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD