Regulon of NrdR in Pseudomonas aeruginosa PAO1
| Regulator type: | Transcription factor |
| TF locus tag: | PA4057 |
| Regulator family: | NrdR |
| Regulation mode: | repressor |
| Biological process: | Deoxyribonucleotide biosynthesis |
| Effector: | Deoxyribonucleotides |
| Regulog: | NrdR - Pseudomonadaceae |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Pseudomonadaceae
- By trascription factor - NrdR
- By TF family - NrdR
- By effector - Deoxyribonucleotides
- By pathway - Deoxyribonucleotide biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -57
Score: 5.1 Sequence: CCACAACATATTGTTG
Position: -26
Score: 4.5 Sequence: ACACATCATGTTGTGG
Locus tag: PA1920
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: PA1919
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
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nrdD
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Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
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nrdG
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Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
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Position: -38
Score: 4.6 Sequence: ACACAAGATATTGATT
Position: -7
Score: 4.6 Sequence: TAACTAGATGTTGCGT
Locus tag: PA5497
Name: nrdJb Funciton: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
Locus tag: PA5496
Name: nrdJa Funciton: Ribonucleotide reductase of class II (coenzyme B12-dependent), alpha subunit (EC 1.17.4.1) |
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nrdJb
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Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
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nrdJa
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Ribonucleotide reductase of class II (coenzyme B12-dependent), alpha subunit (EC 1.17.4.1)
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Position: -398
Score: 4.9 Sequence: CCCCTATATCTTGGGT
Position: -194
Score: 5 Sequence: CCACTAGGTATTGTGT
Locus tag: PA1156
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: PA1155
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
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nrdA
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Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
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nrdB
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Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
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Position: -76
Score: 5.7 Sequence: CCACTATATATAGCGG
Locus tag: PA3011
Name: topA Funciton: DNA topoisomerase I (EC 5.99.1.2) |
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topA
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DNA topoisomerase I (EC 5.99.1.2)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |