Profile of regulator NrdR in Pseudomonadaceae
Properties
| Regulator family: |
NrdR |
| Regulation mode: |
repressor |
| Biological process: |
Deoxyribonucleotide biosynthesis |
| Effector: |
Deoxyribonucleotides |
| Regulog: |
NrdR - Pseudomonadaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Pseudomonas aeruginosa PAO1
|
|
PA3011 |
topA |
-76 |
5.7 |
CCACTATATATAGCGG |
|
PA1156 |
nrdA |
-398 |
4.9 |
CCCCTATATCTTGGGT |
|
PA1156 |
nrdA |
-194 |
5 |
CCACTAGGTATTGTGT |
|
PA1920 |
nrdD |
-57 |
5.1 |
CCACAACATATTGTTG |
|
PA1920 |
nrdD |
-26 |
4.5 |
ACACATCATGTTGTGG |
|
PA5497 |
nrdJb |
-38 |
4.6 |
ACACAAGATATTGATT |
|
PA5497 |
nrdJb |
-7 |
4.6 |
TAACTAGATGTTGCGT |
|
Pseudomonas entomophila L48
|
|
PSEEN1337 |
nrdA |
-432 |
3.4 |
CCGCATTATCTTGTAT |
|
PSEEN1337 |
nrdA |
-401 |
5.4 |
CCACTAGATGTTGGGT |
|
PSEEN3725 |
topA |
-73 |
5.7 |
CCACTATATATAGCGG |
|
PSEEN1335 |
nrdB |
-453 |
4.3 |
ACACCATATGCTGTGG |
|
PSEEN1335 |
nrdB |
-422 |
4.8 |
ACACAACATATAGGAT |
|
Pseudomonas putida KT2440
|
|
PP1179 |
nrdA |
-428 |
3.4 |
CCGCATTATCTTGTAT |
|
PP1179 |
nrdA |
-397 |
5.6 |
CCACTAGATATAGGGG |
|
PP2139 |
topA |
-73 |
5.7 |
CCACTATATATAGCGG |
|
PP1177 |
nrdB |
-343 |
4.7 |
GCACAACATATAGGTT |
|
PP1177 |
nrdB |
-375 |
3.8 |
ACACCATATGATGTGC |
|
Pseudomonas syringae pv. tomato str. DC3000
|
|
PSPTO3514 |
topA |
-71 |
5.7 |
CCACTATATATAGCGT |
|
PSPTO1671 |
nrdA |
-352 |
5 |
ACCCTACATGTAGGGT |
|
PSPTO1661 |
nrdB |
-447 |
4.4 |
TCACTATATGCTGCGC |
|
PSPTO1661 |
nrdB |
-415 |
3.9 |
ACACTACATAAGGGAT |
|
Pseudomonas fluorescens Pf-5
|
|
PFL_1942 |
topA |
-72 |
5.7 |
CCACTATATATAGCGG |
|
PFL_4524 |
nrdB |
-434 |
4.1 |
ACACAACATCTAGTAA |
|
PFL_4476 |
nrdA |
-375 |
4.6 |
TCCCTATATCTAGGGT |
|
Pseudomonas mendocina ymp
|
|
Pmen_3151 |
nrdA |
-407 |
5.1 |
CCACCAGATATTGGGT |
|
Pmen_3151 |
nrdA |
-214 |
5.1 |
CCACTATATGTAGTAG |
|
Pmen_1583 |
topA |
-69 |
5.7 |
CCACTATATATAGCGG |
|
Pseudomonas stutzeri A1501
|
|
PST_1637 |
nrdA |
-202 |
5.2 |
ACACAACATATTGTGT |
|
PST_1729 |
topA |
-241 |
5.7 |
CCACTATATATAGCGG |
|
PST_3509 |
nrdD |
-58 |
4.6 |
TCACACCATATTGTGG |
|
PST_3509 |
nrdD |
-27 |
4.4 |
ACACTACATATGGTTA |
|
PST_1637 |
nrdA |
-392 |
5.1 |
CCCCTAGATGTTGGGT |
|
Azotobacter vinelandii AvOP
|
|
Avin_33290 |
nrdA |
-163 |
5.4 |
CCACTAGATGTTGTGG |
|
Avin_14470 |
topA |
-222 |
5.4 |
CCACTATATATAGCGC |
|
Avin_33290 |
nrdA |
-352 |
5 |
CCCCTACATATAGGGA |
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