Regulon of HypR in Pseudomonas aeruginosa PAO1

Properties
Regulator type:	Transcription factor
TF locus tag:	PA1269
Regulator family:	GntR/Others
Regulation mode:	activator (repressor)
Biological process:	Proline and 4-hydrohyproline utilization
Effector:	Proline; 4-hydroxyproline
Regulog:	HypR - Pseudomonadaceae
Statistics of regulated genes:
- Genes	11
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 3 sites [see more]

Member of regulog collections

By taxonomy - Pseudomonadaceae
By trascription factor - HypR
By TF family - GntR/Others
By effector - Proline
By effector - 4-hydroxyproline
By pathway - Proline and 4-hydrohyproline utilization

Regulated operons
	Locus Tag	Name	Function
Position: -61 Score: 4.5 Sequence: TTCGTATACAAT Locus tag: PA1269 Name: hypR Funciton: Predicted regulator for proline and hydrohyproline utilization, GntR family Locus tag: PA1268 Name: hypE Funciton: Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8) Locus tag: PA1267 Name: hypO Funciton: D-amino acid dehydrogenase (EC 1.4.99.1) family protein in hydroxy-L-proline catabolic cluster
	PA1269	hypR	Predicted regulator for proline and hydrohyproline utilization, GntR family
	PA1268	hypE	Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8)
	PA1267	hypO	D-amino acid dehydrogenase (EC 1.4.99.1) family protein in hydroxy-L-proline catabolic cluster
Position: -67 Score: 3.8 Sequence: ATCGTATACGAA Locus tag: PA1260 Name: hypM Funciton: Predicted hydroxyproline ABC transporter, substrate-binding protein Locus tag: PA1259 Name: hypX Funciton: Putative citrate/isocitrate isomerase or aconitase ## predicted from clustering to proline racemase Locus tag: PA1258 Name: hypN Funciton: Predicted hydroxyproline ABC transporter, permease protein Locus tag: PA1257 Name: hypP Funciton: Predicted hydroxyproline ABC transporter, permease protein Locus tag: PA1256 Name: hypQ Funciton: Predicted hydroxyproline ABC transporter, ATP-binding protein Locus tag: PA1255 Name: hypY Funciton: Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8)
	PA1260	hypM	Predicted hydroxyproline ABC transporter, substrate-binding protein
	PA1259	hypX	Putative citrate/isocitrate isomerase or aconitase ## predicted from clustering to proline racemase
	PA1258	hypN	Predicted hydroxyproline ABC transporter, permease protein
	PA1257	hypP	Predicted hydroxyproline ABC transporter, permease protein
	PA1256	hypQ	Predicted hydroxyproline ABC transporter, ATP-binding protein
	PA1255	hypY	Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8)
Position: -32 Score: 3.7 Sequence: TTCGTATACGAA Locus tag: PA1254 Name: hypD Funciton: 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) # predicted Locus tag: PA1253 Name: hypH Funciton: Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) # hydroxy-L-proline-inducible
	PA1254	hypD	1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) # predicted
	PA1253	hypH	Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) # hydroxy-L-proline-inducible

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD