Regulon of NtrC in Pseudomonas aeruginosa PAO1

Properties
Regulator type:	Transcription factor
TF locus tag:	PA5125
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Pseudomonadaceae
Statistics of regulated genes:
- Genes	8
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 49 sites [see more]

Member of regulog collections

By taxonomy - Pseudomonadaceae
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -182 Score: 5.4 Sequence: CGCACCAGATTGGTGCG Locus tag: PA5124 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: PA5125 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	PA5124	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	PA5125	ntrC	Nitrogen regulation protein NR(I), Fis family
Position: -118 Score: 4.5 Sequence: TGCACCAGACTGGGGCG Locus tag: PA1730 Name: ybdK Funciton: Carboxylate-amine ligase Locus tag: PA1731 Name: PF04168 Funciton: Conserved hypothetical protein Locus tag: PA1732 Name: PF01841 Funciton: Transglutaminase-like protein
	PA1730	ybdK	Carboxylate-amine ligase
	PA1731	PF04168	Conserved hypothetical protein
	PA1732	PF01841	Transglutaminase-like protein
Position: -220 Score: 5.1 Sequence: TGCACCAACATGGAGCA Position: -207 Score: 5.3 Sequence: AGCACCATAACGGTGCA Locus tag: PA5119 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	PA5119	glnA	Glutamine synthetase type I (EC 6.3.1.2)
Position: -338 Score: 5.2 Sequence: TGCGCCTATTTGGTGCG Locus tag: PA5288 Name: glnK Funciton: Nitrogen regulatory protein P-II Locus tag: PA5287 Name: amtB Funciton: Ammonium transporter
	PA5288	glnK	Nitrogen regulatory protein P-II
	PA5287	amtB	Ammonium transporter

Export
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