Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PsrA in Pseudomonas aeruginosa PAO1

Properties
Regulator type: Transcription factor
TF locus tag: PA3006
Regulator family: TetR
Regulation mode: repressor
Biological process: Fatty acid degradation
Effector: Oleate
Regulog: PsrA - Pseudomonadaceae
Statistics of regulated genes:
- Genes 13
- Operons 8
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 69 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -139
Score: 5.5
Sequence: TTTCAAACGCCTGTTTGAGA
Locus tag: PA0506
Name: acdH1
Funciton: probable acyl-CoA dehydrogenase
Locus tag: PA0507
Name: acdH2
Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: PA0508
Name: acdH3
Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
PA0506
acdH1
probable acyl-CoA dehydrogenase
PA0507
acdH2
Acyl-CoA dehydrogenase (EC 1.3.99.3)
PA0508
acdH3
Acyl-CoA dehydrogenase (EC 1.3.99.3)
Position: -84
Score: 5.7
Sequence: ATTCAAACAAGCGTATGTTT
Locus tag: PA1831
Name: null
Funciton: Phosphoglycerate mutase family protein
Locus tag: PA1830
Name: scp
Funciton: Sterol-binding domain protein
PA1831
Phosphoglycerate mutase family protein
PA1830
scp
Sterol-binding domain protein
Position: -180
Score: 5.5
Sequence: AGTCAAACGGGCGTATGAAT
Locus tag: PA3014
Name: fadB
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: PA3013
Name: fadA
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
PA3014
fadB
Enoyl-CoA hydratase (EC 4.2.1.17)
PA3013
fadA
3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Position: -427
Score: 4.8
Sequence: CCTCAAACGGAAGTTTGAAT
Locus tag: PA3622
Name: rpoS
Funciton: RNA polymerase sigma factor RpoS
PA3622
rpoS
RNA polymerase sigma factor RpoS
Position: -122
Score: 5.9
Sequence: ATTCAAACAAACGTTTGTAT
Locus tag: PA2953
Name: etfD
Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
PA2953
etfD
Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Position: -218
Score: 5.6
Sequence: ATACAAACGTTTGTTTGAAT
Locus tag: PA2952
Name: etfB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: PA2951
Name: etfA
Funciton: Electron transfer flavoprotein, alpha subunit
PA2952
etfB
Electron transfer flavoprotein, beta subunit
PA2951
etfA
Electron transfer flavoprotein, alpha subunit
Position: -196
Score: 5.5
Sequence: GATCAAACATCCGTATGAAT
Locus tag: PA5255
Name: algQ
Funciton: Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
PA5255
algQ
Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
Position: -45
Score: 5
Sequence: GCTGAAACGTATGTTTCAAA
Position: -32
Score: 5.8
Sequence: TTTCAAACAAGTGTTTGTCA
Locus tag: PA3006
Name: psrA
Funciton: Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family
PA3006
psrA
Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family
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