Profile of regulator PsrA in Pseudomonadaceae
Properties
| Regulator family: |
TetR |
| Regulation mode: |
repressor |
| Biological process: |
Fatty acid degradation |
| Effector: |
Oleate |
| Regulog: |
PsrA - Pseudomonadaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Pseudomonas aeruginosa PAO1
|
|
PA3006 |
psrA |
-45 |
5 |
GCTGAAACGTATGTTTCAAA |
|
PA3006 |
psrA |
-32 |
5.8 |
TTTCAAACAAGTGTTTGTCA |
|
PA0506 |
acdH1 |
-139 |
5.5 |
TTTCAAACGCCTGTTTGAGA |
|
PA1831 |
null |
-84 |
5.7 |
ATTCAAACAAGCGTATGTTT |
|
PA3014 |
fadB |
-180 |
5.5 |
AGTCAAACGGGCGTATGAAT |
|
PA2953 |
etfD |
-122 |
5.9 |
ATTCAAACAAACGTTTGTAT |
|
PA3622 |
rpoS |
-427 |
4.8 |
CCTCAAACGGAAGTTTGAAT |
|
PA5255 |
algQ |
-196 |
5.5 |
GATCAAACATCCGTATGAAT |
|
PA2952 |
etfB |
-218 |
5.6 |
ATACAAACGTTTGTTTGAAT |
|
Pseudomonas entomophila L48
|
|
PSEEN2270 |
null |
-99 |
5.2 |
GTTCAAACGACCTTTTCAAA |
|
PSEEN3720 |
psrA |
-45 |
4.7 |
CCTGAAACGTATGTTTCAAA |
|
PSEEN3720 |
psrA |
-32 |
5.7 |
TTTCAAACAACTGTTTGTCA |
|
PSEEN3648 |
null |
-72 |
5.4 |
TTTCAAACGTATGTTTGAGC |
|
PSEEN1703 |
fadH |
-102 |
4.9 |
GTTCAAACGCCTGTTTAATG |
|
PSEEN3658 |
etfB |
-391 |
5.6 |
ATACAAACGTTTGTTTGAAT |
|
PSEEN3660 |
etfD |
-153 |
5.9 |
ATTCAAACAAACGTTTGTAT |
|
PSEEN4189 |
rpoS |
-428 |
5.1 |
CTTCAAACGGTAGTTTGAAT |
|
PSEEN0159 |
algQ |
-182 |
5.1 |
GATTAAACGCTTGTATGAAC |
|
PSEEN5115 |
acdH1 |
-87 |
5.7 |
TTTCAAACAACTGTTTGACC |
|
PSEEN2270 |
null |
-86 |
5.7 |
TTTCAAACGCTTGTATGTTT |
|
PSEEN3728 |
fadB |
-162 |
5.7 |
AATCAAACGGGCGTATGAAT |
|
Pseudomonas putida KT2440
|
|
PP2144 |
psrA |
-54 |
5 |
GCTGAAACGTATGTTTCAAA |
|
PP2144 |
psrA |
-41 |
5.7 |
TTTCAAACACCTGTTTGTCT |
|
PP4195 |
null |
-83 |
5.5 |
TTTCAAACGACTGTTTGAGC |
|
PP2008 |
fadH |
-54 |
5 |
ATTCAAACGGCTGTTTAATG |
|
PP2136 |
fadB |
-161 |
5.7 |
AATCAAACGGGCGTATGAAT |
|
PP4202 |
etfB |
-392 |
5.6 |
ATACAAACGTTTGTTTGAAT |
|
PP3923 |
null |
-98 |
5.3 |
TTTCAAACAACCTTTTCAAA |
|
PP3923 |
null |
-85 |
5.7 |
TTTCAAACGCTTGTATGTTT |
|
PP4203 |
etfD |
-163 |
5.9 |
ATTCAAACAAACGTTTGTAT |
|
PP1623 |
rpoS |
-431 |
5.1 |
CTTCAAACGGTAGTTTGAAT |
|
PP0191 |
algQ |
-182 |
5.2 |
TATTAAACACTTGTATGAAC |
|
PP0368 |
acdH1 |
-73 |
5.8 |
TTTCAAACAACTGTTTGATC |
|
Pseudomonas syringae pv. tomato str. DC3000
|
|
PSPTO3508 |
psrA |
-31 |
5.6 |
TTTCAAACGTTCGTTTGTTA |
|
PSPTO2192 |
null |
-68 |
4.8 |
TTTCAAACAAACGTTTTGAC |
|
PSPTO3517 |
fadB |
-180 |
5.7 |
AATCAAACGGGCGTATGAAA |
|
PSPTO2185 |
etfB |
-373 |
5.6 |
ATACAAACGTTTGTTTGAAT |
|
PSPTO2726 |
null |
-89 |
5.8 |
TTTCAAACGAGCGTATGTTT |
|
PSPTO1565 |
rpoS |
-427 |
4.8 |
CCTCAAACGGCAGTTTGAAT |
|
PSPTO0134 |
algQ |
-180 |
5.3 |
TATTAAACGCTTGTATGAAC |
|
PSPTO0500 |
acdH1 |
-113 |
5.6 |
TTTCAAACACCTGTTTGACC |
|
Pseudomonas fluorescens Pf-5
|
|
PFL_1950 |
psrA |
-45 |
4.7 |
CCTGAAACGTATGTTTCAAA |
|
PFL_1950 |
psrA |
-32 |
5.8 |
TTTCAAACAAGTGTTTGTCA |
|
PFL_1826 |
null |
-76 |
4.5 |
TTTTAAACGGCTGTTTTAGC |
|
PFL_1940 |
fadB |
-180 |
5.7 |
AATCAAACGGGCGTATGAAA |
|
PFL_1819 |
etfB |
-393 |
5.6 |
ATACAAACGTTTGTTTGAAT |
|
PFL_3668 |
null |
-88 |
5.7 |
TTTCAAACAAGCGTATGTTT |
|
PFL_1818 |
etfD |
-176 |
5.9 |
ATTCAAACAAACGTTTGTAT |
|
PFL_1207 |
rpoS |
-429 |
5.1 |
CTTCAAACGGTAGTTTGAAT |
|
PFL_5997 |
algQ |
-183 |
5.1 |
GATTAAACGCTTGTATGAAC |
|
PFL_5687 |
acdH1 |
-78 |
5.7 |
TTTCAAACAACTGTTTGACC |
|
Pseudomonas mendocina ymp
|
|
Pmen_1588 |
psrA |
-44 |
5 |
GCTGAAACGTATGTTTCAAA |
|
Pmen_1588 |
psrA |
-31 |
5.8 |
TTTCAAACAAGTGTTTGTCA |
|
Pmen_1580 |
fadB |
-178 |
5.7 |
AATCAAACGGGCGTATGAAT |
|
Pmen_2707 |
etfB |
-221 |
5.6 |
ATACAAACGTTTGTTTGAAT |
|
Pmen_2708 |
etfD |
-123 |
5.9 |
ATTCAAACAAACGTTTGTAT |
|
Pmen_3020 |
rpoS |
-424 |
4.8 |
CCTCAAACGGTAGTTTGAAT |
|
Pmen_0285 |
algQ |
-269 |
5.2 |
GATTAAACGCTCGTATGAAA |
|
Pmen_4081 |
acdH1 |
-125 |
5.9 |
TTTCAAACGCCTGTTTGATT |
|
Pmen_2531 |
null |
-89 |
5.7 |
ATTCAAACAAGCGTATGTTT |
|
Pseudomonas stutzeri A1501
|
|
PST_3860 |
acdH1 |
-71 |
4.7 |
GTCGAAACGTATGTTTCAAA |
|
PST_3860 |
acdH1 |
-58 |
5.7 |
TTTCAAACGCCTGTTTGACC |
|
PST_1735 |
psrA |
-32 |
5.6 |
TTTCAAACAGTTGTTTGTCT |
|
PST_1726 |
fadB |
-155 |
5.7 |
AATCAAACGGGCGTATGAAT |
|
PST_2241 |
null |
-146 |
5.6 |
ATTCAAACAAACGTTCGAAT |
|
PST_2605 |
etfB |
-323 |
5.6 |
ATACAAACGTTTGTTTGAAT |
|
PST_2607 |
etfD |
-130 |
5.9 |
ATTCAAACAAACGTTTGTAT |
|
PST_1572 |
rpoS |
-421 |
4.8 |
CCTCAAACGGTAGTTTGAAT |
|
Azotobacter vinelandii AvOP
|
|
Avin_38680 |
rpoS |
-422 |
4.8 |
CCTCAAACGGCAGTTTGAAT |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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