Regulog ArgR - Shewanellaceae
| Regulator type: | Transcription factor |
| Regulator family: | ArgR |
| Regulation mode: | repressor (activator) |
| Biological process: | Arginine degradation; Arginine biosynthesis |
| Effector: | Arginine |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By trascription factor - ArgR
- By TF family - ArgR
- By effector - Arginine
- By pathway - Arginine degradation
- By pathway - Arginine biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Shewanella oneidensis MR-1 | 39 | 22 |
| Shewanella putrefaciens CN-32 | 40 | 21 |
| Shewanella sp W3-18-1 | 41 | 21 |
| Shewanella sp ANA-3 | 41 | 24 |
| Shewanella sp MR-4 | 38 | 21 |
| Shewanella sp MR-7 | 43 | 24 |
| Shewanella baltica OS155 | 37 | 21 |
| Shewanella denitrificans OS217 | 25 | 13 |
| Shewanella frigidimarina NCIMB 400 | 38 | 16 |
| Shewanella amazonensis SB2B | 42 | 18 |
| Shewanella loihica PV-4 | 35 | 17 |
| Shewanella pealeana ATCC 700345 | 34 | 19 |
| Shewanella halifaxensis HAW-EB4 | 32 | 17 |
| Shewanella piezotolerans WP3 | 37 | 17 |
| Shewanella sediminis HAW-EB3 | 31 | 17 |
| Shewanella woodyi ATCC 51908 | 38 | 19 |
| Genes | Function | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||||||
| SO1443 |
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Shewanella oneidensis MR-1 Site: position = -299 score = 5.20781 sequence = TATGCATATTAATTCAGA Gene: SO_1443: Conserved hypothetical protein |
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Shewanella sp ANA-3 Site: position = -268 score = 5.20781 sequence = TATGCATATTAATTCAGA Gene: Shewana3_1795: Conserved hypothetical protein |
Gene: Shewmr4_1691: Conserved hypothetical protein |
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Shewanella sp MR-7 Site: position = -260 score = 5.20781 sequence = TATGCATATTAATTCAGA Gene: Shewmr7_1767: Conserved hypothetical protein |
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Conserved hypothetical protein |
| CRON 2. | |||||||||||||||||
| mcp(Arg) |
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Shewanella oneidensis MR-1 Site: position = -286 score = 5.45122 sequence = TGTGAATATATATGCAAT Gene: SO_4466: Methyl-accepting chemotaxis protein |
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Shewanella putrefaciens CN-32 Site: position = -332 score = 5.30664 sequence = GATGAATTTATATGCATT Gene: Sputcn32_0380: Methyl-accepting chemotaxis protein |
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Shewanella sp W3-18-1 Site: position = -332 score = 5.30664 sequence = GATGAATTTATATGCATT Gene: Sputw3181_0230: Methyl-accepting chemotaxis protein |
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Shewanella sp ANA-3 Site: position = -289 score = 5.13143 sequence = TTTGAATTTGTATTCAAT Gene: Shewana3_0264: Methyl-accepting chemotaxis protein |
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Shewanella sp MR-7 Site: position = -274 score = 5.5416 sequence = TATGAATTTATATTCATT Site: position = -253 score = 4.77845 sequence = TGTGATTTTCAATTCAAT Gene: Shewmr7_3758: Methyl-accepting chemotaxis protein |
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Shewanella baltica OS155 Site: position = -311 score = 4.46813 sequence = AATAAATTTCAATGCATT Site: position = -332 score = 5.18872 sequence = GATGAATTTATATGCATA Gene: Sbal_0274: Methyl-accepting chemotaxis protein |
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Gene: Sama_0030: Methyl-accepting chemotaxis protein |
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Gene: swp_1480: Methyl-accepting chemotaxis protein |
Gene: Ssed_0529: Methyl-accepting chemotaxis protein |
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Methyl-accepting chemotaxis protein |
| CRON 3. | |||||||||||||||||
| ggt2 |
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Shewanella oneidensis MR-1 Site: position = -25 score = 4.69264 sequence = AATGAAAATAAATTCAGG Gene: SO_1952: Gamma-glutamyltranspeptidase (EC 2.3.2.2) |
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Shewanella putrefaciens CN-32 Site: position = -25 score = 4.69264 sequence = AATGAAAATAAATTCAGG Gene: Sputcn32_1667: Gamma-glutamyltranspeptidase (EC 2.3.2.2) |
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Shewanella sp W3-18-1 Site: position = -25 score = 4.69264 sequence = AATGAAAATAAATTCAGG Gene: Sputw3181_2358: Gamma-glutamyltranspeptidase (EC 2.3.2.2) |
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Shewanella sp ANA-3 Site: position = -25 score = 4.69264 sequence = AATGAAAATAAATTCAGG Gene: Shewana3_2487: Gamma-glutamyltranspeptidase (EC 2.3.2.2) |
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Shewanella sp MR-4 Site: position = -25 score = 4.69264 sequence = AATGAAAATAAATTCAGG Gene: Shewmr4_2297: Gamma-glutamyltranspeptidase (EC 2.3.2.2) |
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Shewanella sp MR-7 Site: position = -25 score = 4.69264 sequence = AATGAAAATAAATTCAGG Gene: Shewmr7_2369: Gamma-glutamyltranspeptidase (EC 2.3.2.2) |
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Shewanella baltica OS155 Site: position = -25 score = 4.69264 sequence = AATGAAAATAAATTCAGG Gene: Sbal_2620: Gamma-glutamyltranspeptidase (EC 2.3.2.2) |
Gene: Sden_1655: Gamma-glutamyltranspeptidase (EC 2.3.2.2) |
Gene: Sfri_2330: Gamma-glutamyltranspeptidase (EC 2.3.2.2) |
Gene: Sama_1566: Gamma-glutamyltranspeptidase (EC 2.3.2.2) |
Gene: Shew_2158: Gamma-glutamyltranspeptidase (EC 2.3.2.2) |
Gene: Spea_1864: Gamma-glutamyltranspeptidase (EC 2.3.2.2) |
Gene: Shal_2420: Gamma-glutamyltranspeptidase (EC 2.3.2.2) |
Gene: swp_2874: Gamma-glutamyltranspeptidase (EC 2.3.2.2) |
Gene: Ssed_2689: Gamma-glutamyltranspeptidase (EC 2.3.2.2) |
Gene: Swoo_1929: Gamma-glutamyltranspeptidase (EC 2.3.2.2) |
Gamma-glutamyltranspeptidase (EC 2.3.2.2) |
| CRON 4. | |||||||||||||||||
| SO4732 |
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Shewanella oneidensis MR-1 Site: position = -106 score = 4.15546 sequence = TTTAAATTCACATTCAGT Gene: SO_4732: Conserved hypothetical protein |
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Shewanella putrefaciens CN-32 Site: position = -112 score = 5.27154 sequence = GATGCATTTAAATTCACA Gene: Sputcn32_3915: Conserved hypothetical protein |
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Shewanella sp W3-18-1 Site: position = -112 score = 5.27154 sequence = GATGCATTTAAATTCACA Gene: Sputw3181_0037: Conserved hypothetical protein |
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Shewanella sp ANA-3 Site: position = -106 score = 4.15546 sequence = TTTAAATTCACATTCAGT Gene: Shewana3_4118: Conserved hypothetical protein |
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Shewanella sp MR-4 Site: position = -106 score = 4.15546 sequence = TTTAAATTCACATTCAGT Gene: Shewmr4_3913: Conserved hypothetical protein |
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Shewanella sp MR-7 Site: position = -106 score = 4.15546 sequence = TTTAAATTCACATTCAGT Gene: Shewmr7_4005: Conserved hypothetical protein |
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Shewanella baltica OS155 Site: position = -112 score = 4.77379 sequence = AACGCATTTAAATTCACA Gene: Sbal_0045: Conserved hypothetical protein |
Gene: Sden_3628: Conserved hypothetical protein |
Gene: Sfri_0040: Conserved hypothetical protein |
Gene: Sama_0084: Conserved hypothetical protein |
Gene: Shew_3722: Conserved hypothetical protein |
Gene: Spea_0095: Conserved hypothetical protein |
Gene: Shal_4227: Conserved hypothetical protein |
Gene: swp_5080: Conserved hypothetical protein |
Gene: Ssed_0089: Conserved hypothetical protein |
Gene: Swoo_0052: Conserved hypothetical protein |
Conserved hypothetical protein |
| CRON 5. | |||||||||||||||||
| pbpG |
Gene: SO_0999: D-alanyl-D-alanine endopeptidase |
Gene: Sputcn32_3047: D-alanyl-D-alanine endopeptidase |
Gene: Sputw3181_0898: D-alanyl-D-alanine endopeptidase |
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Shewanella sp ANA-3 Site: position = -209 score = 4.20657 sequence = ATTGAATTTTTATTGGTA Site: position = -165 score = 5.28648 sequence = AGTGAATGAAAATTCAGA Gene: Shewana3_3292: D-alanyl-D-alanine endopeptidase |
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Shewanella sp MR-4 Site: position = -189 score = 4.51485 sequence = ACTGCTTAGTTATTCATT Site: position = -153 score = 3.64695 sequence = TGTTATTTTGCATTCATT Gene: Shewmr4_0828: D-alanyl-D-alanine endopeptidase |
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Shewanella sp MR-7 Site: position = -189 score = 4.30313 sequence = GCTGCTTAGTTATTCATT Gene: Shewmr7_3195: D-alanyl-D-alanine endopeptidase |
Gene: Sbal_3386: D-alanyl-D-alanine endopeptidase |
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Shewanella denitrificans OS217 Site: position = -235 score = 4.38614 sequence = ATTGAATTTAAAAGAATT Site: position = -121 score = 3.99745 sequence = AAGTCATAATAATTCACT Site: position = -37 score = 4.82325 sequence = CGTGCATGATTATTCAAT Gene: Sden_1095: D-alanyl-D-alanine endopeptidase |
Gene: Sfri_0851: D-alanyl-D-alanine endopeptidase |
Gene: Sama_0072: D-alanyl-D-alanine endopeptidase |
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D-alanyl-D-alanine endopeptidase |
| CRON 6. | |||||||||||||||||
| artI |
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Shewanella oneidensis MR-1 Site: position = -76 score = 3.9524 sequence = AAAGCATAATTATTGACA Site: position = -97 score = 5.05209 sequence = AATGAATTTTTAGTCACA Gene: SO_1044: Arginine ABC transporter, substrate-binding protein |
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Shewanella putrefaciens CN-32 Site: position = -85 score = 3.9524 sequence = AAAGCATAATTATTGACA Site: position = -106 score = 5.12681 sequence = AATGAATTTATAGTCACA Gene: Sputcn32_3027: Arginine ABC transporter, substrate-binding protein |
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Shewanella sp W3-18-1 Site: position = -85 score = 3.9524 sequence = AAAGCATAATTATTGACA Site: position = -106 score = 5.12681 sequence = AATGAATTTATAGTCACA Gene: Sputw3181_0918: Arginine ABC transporter, substrate-binding protein |
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Shewanella sp ANA-3 Site: position = -97 score = 4.81721 sequence = TATGCATTTTTAATCATT Site: position = -254 score = 4.363 sequence = AATGAATAAAAAATGATA Site: position = -76 score = 3.9524 sequence = AAAGCATAATTATTGAAA Gene: Shewana3_0882: Arginine ABC transporter, substrate-binding protein |
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Shewanella sp MR-4 Site: position = -254 score = 4.363 sequence = AATGAATAAAAAATGATA Site: position = -76 score = 3.9524 sequence = AAAGCATAATTATTGACA Site: position = -97 score = 4.95837 sequence = TATGAATTTTTAATCATT Gene: Shewmr4_3053: Arginine ABC transporter, substrate-binding protein |
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Shewanella sp MR-7 Site: position = -76 score = 3.9524 sequence = AAAGCATAATTATTGACA Site: position = -97 score = 5.0029 sequence = AATGAATTTTTAATCAAA Gene: Shewmr7_0919: Arginine ABC transporter, substrate-binding protein |
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Shewanella baltica OS155 Site: position = -99 score = 5.0029 sequence = AATGAATTTTTAATCAAA Site: position = -78 score = 3.9524 sequence = ACAGCATAATTATTGACA Gene: Sbal_3392: Arginine ABC transporter, substrate-binding protein |
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Shewanella loihica PV-4 Site: position = -82 score = 3.69034 sequence = ATCGCATAAGTATTGACT Site: position = -103 score = 4.62786 sequence = AATGACTAAATAGTCATT Gene: Shew_3166: Arginine ABC transporter, substrate-binding protein |
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Shewanella pealeana ATCC 700345 Site: position = -51 score = 4.02293 sequence = TATCAGTTTATAGTCAAT Site: position = -77 score = 4.09903 sequence = GATGCATAAGTATTGATT Site: position = -98 score = 4.27018 sequence = ATCGAATTTTTACGCATT Site: position = -239 score = 4.66998 sequence = AGTACATATTTATTCACA Gene: Spea_3397: Arginine ABC transporter, substrate-binding protein |
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Shewanella halifaxensis HAW-EB4 Site: position = -98 score = 4.67592 sequence = CTTGAATTTTTAATCAAA Site: position = -228 score = 5.34288 sequence = AATGAATTATTATTCAAC Gene: Shal_3484: Arginine ABC transporter, substrate-binding protein |
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Shewanella sediminis HAW-EB3 Site: position = -98 score = 5.19553 sequence = AGTGAATTTATAATCATT Site: position = -77 score = 3.69881 sequence = CACGCATAATTATTGACT Gene: Ssed_3760: Arginine ABC transporter, substrate-binding protein |
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Arginine ABC transporter, substrate-binding protein |
| artQ |
Gene: SO_1043: Arginine ABC transporter, permease protein |
Gene: Sputcn32_3028: Arginine ABC transporter, permease protein |
Gene: Sputw3181_0917: Arginine ABC transporter, permease protein |
Gene: Shewana3_0881: Arginine ABC transporter, permease protein |
Gene: Shewmr4_3054: Arginine ABC transporter, permease protein |
Gene: Shewmr7_0918: Arginine ABC transporter, permease protein |
Gene: Sbal_3393: Arginine ABC transporter, permease protein |
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Gene: Shew_3165: Arginine ABC transporter, permease protein |
Gene: Spea_3398: Arginine ABC transporter, permease protein |
Gene: Shal_3485: Arginine ABC transporter, permease protein |
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Gene: Ssed_3761: Arginine ABC transporter, permease protein |
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Arginine ABC transporter, permease protein |
| artM |
Gene: SO_1042: Arginine ABC transporter, ATP-binding protein |
Gene: Sputcn32_3029: Arginine ABC transporter, ATP-binding protein |
Gene: Sputw3181_0916: Arginine ABC transporter, ATP-binding protein |
Gene: Shewana3_0880: Arginine ABC transporter, ATP-binding protein |
Gene: Shewmr4_3055: Arginine ABC transporter, ATP-binding protein |
Gene: Shewmr7_0917: Arginine ABC transporter, ATP-binding protein |
Gene: Sbal_3394: Arginine ABC transporter, ATP-binding protein |
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Gene: Shew_3164: Arginine ABC transporter, ATP-binding protein |
Gene: Spea_3399: Arginine ABC transporter, ATP-binding protein |
Gene: Shal_3486: Arginine ABC transporter, ATP-binding protein |
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Gene: Ssed_3762: Arginine ABC transporter, ATP-binding protein |
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Arginine ABC transporter, ATP-binding protein |
| CRON 7. | |||||||||||||||||
| Swoo_0949 |
Gene: SO_3797: Peptidase U32 |
Gene: Sputcn32_0835: Peptidase U32 |
Gene: Sputw3181_3338: Peptidase U32 |
Gene: Shewana3_0800: Peptidase U32 |
Gene: Shewmr4_3138: Peptidase U32 |
Gene: Shewmr7_0828: Peptidase U32 |
Gene: Sbal_0734: Peptidase U32 |
Gene: Sden_0726: Peptidase U32 |
Gene: Sfri_0821: Peptidase U32 |
Gene: Sama_0677: Peptidase U32 |
Gene: Shew_0818: Peptidase U32 |
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Shewanella pealeana ATCC 700345 Site: position = -101 score = 4.17256 sequence = GTTGCTTAAAAATTGATT Gene: Spea_0764: Peptidase U32 |
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Shewanella halifaxensis HAW-EB4 Site: position = -91 score = 3.74935 sequence = ATTGATTTAATATTAGCT Site: position = -102 score = 4.26637 sequence = TTTGCTTAAAAATTGATT Gene: Shal_0816: Peptidase U32 |
Gene: swp_4276: Peptidase U32 |
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Shewanella sediminis HAW-EB3 Site: position = -92 score = 4.28806 sequence = AATGAATTTATATTAGCT Site: position = -146 score = 3.6766 sequence = AGTGCATTACTGAGCAAA Gene: Ssed_0847: Peptidase U32 |
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Shewanella woodyi ATCC 51908 Site: position = -92 score = 4.99457 sequence = ACTGAATTTATATTCGCT Gene: Swoo_0949: Peptidase U32 |
Peptidase U32 |
| CRON 8. | |||||||||||||||||
| aprE |
Gene: SO_3106: Alkaline serine protease |
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Shewanella putrefaciens CN-32 Site: position = -156 score = 5.55594 sequence = ATTGAATTTTTATTCACA Gene: Sputcn32_2477: Alkaline serine protease |
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Shewanella sp W3-18-1 Site: position = -156 score = 5.55594 sequence = ATTGAATTTTTATTCACA Gene: Sputw3181_1531: Alkaline serine protease |
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Shewanella sp ANA-3 Site: position = -190 score = 4.66649 sequence = CATGAGTATTTATTCATT Gene: Shewana3_1443: Alkaline serine protease |
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Shewanella sp MR-4 Site: position = -123 score = 3.77689 sequence = ATTTAATTTACAAACACT Site: position = -190 score = 4.92008 sequence = TATGAGTATTTATTCATT Gene: Shewmr4_1390: Alkaline serine protease |
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Shewanella sp MR-7 Site: position = -123 score = 3.77689 sequence = ATTTAATTTACAAACACT Site: position = -190 score = 4.92008 sequence = TATGAGTATTTATTCATT Gene: Shewmr7_1455: Alkaline serine protease |
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Shewanella baltica OS155 Site: position = -189 score = 5.41895 sequence = GTTGAATTTATATTCACA Gene: Sbal_2779: Alkaline serine protease |
Gene: Sden_1409: Alkaline serine protease |
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Shewanella frigidimarina NCIMB 400 Site: position = -190 score = 5.3825 sequence = GTTGAATTTTAATTCAAA Gene: Sfri_2692: Alkaline serine protease |
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Shewanella amazonensis SB2B Site: position = -236 score = 4.28248 sequence = TCCGAATATTCATTCAGC Site: position = -185 score = 4.54912 sequence = TTTGCATAAATATTCTAA Gene: Sama_2185: Alkaline serine protease |
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Shewanella loihica PV-4 Site: position = -229 score = 4.18177 sequence = TTCGAATAAATACTCAAA Site: position = -166 score = 4.51962 sequence = TCTGCATAAAAATGCTCT Gene: Shew_2443: Alkaline serine protease |
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Gene: swp_3159: Alkaline serine protease |
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Shewanella sediminis HAW-EB3 Site: position = -187 score = 4.24167 sequence = ACGCAATATTTATTCAGT Gene: Ssed_1611: Alkaline serine protease |
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Shewanella woodyi ATCC 51908 Site: position = -240 score = 4.19547 sequence = GTCGCATATTAATTCAGG Gene: Swoo_3041: Alkaline serine protease |
Alkaline serine protease |
| CRON 9. | |||||||||||||||||
| SO3392 |
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Shewanella oneidensis MR-1 Site: position = -84 score = 4.58621 sequence = ATTGAACAAACATTCAAA Site: position = -60 score = 4.62157 sequence = CTTGAATGATCATTCAAA Gene: SO_3392: NADH-dependent flavin oxidoreductase, Oye family |
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Shewanella putrefaciens CN-32 Site: position = -60 score = 4.6963 sequence = CTTGAATGTTCATTCAAA Site: position = -84 score = 4.4683 sequence = TTTGAACAAACATTCAAA Site: position = -33 score = 4.01819 sequence = CTTGAATGCACATTCAAG Gene: Sputcn32_2720: NADH-dependent flavin oxidoreductase, Oye family |
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Shewanella sp W3-18-1 Site: position = -33 score = 4.01819 sequence = CTTGAATGCACATTCAAG Site: position = -60 score = 4.6963 sequence = CTTGAATGTTCATTCAAA Site: position = -84 score = 4.4683 sequence = TTTGAACAAACATTCAAA Gene: Sputw3181_1292: NADH-dependent flavin oxidoreductase, Oye family |
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Shewanella sp ANA-3 Site: position = -33 score = 4.01819 sequence = CTTGAATGCACATTCAAG Site: position = -60 score = 3.91505 sequence = CTTGAATGATCGTTCAAA Site: position = -84 score = 4.4683 sequence = TTTGAACAAACATTCAAA Gene: Shewana3_1159: NADH-dependent flavin oxidoreductase, Oye family |
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Shewanella sp MR-4 Site: position = -84 score = 4.4683 sequence = TTTGAACAAACATTCAAA Site: position = -60 score = 3.91505 sequence = CTTGAATGATCGTTCAAA Gene: Shewmr4_1158: NADH-dependent flavin oxidoreductase, Oye family |
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Shewanella sp MR-7 Site: position = -60 score = 3.91505 sequence = CTTGAATGATCGTTCAAA Site: position = -84 score = 4.4683 sequence = TTTGAACAAACATTCAAA Site: position = -33 score = 4.24312 sequence = CTTGAATGCATATTCAAG Gene: Shewmr7_1229: NADH-dependent flavin oxidoreductase, Oye family |
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Shewanella baltica OS155 Site: position = -84 score = 4.94989 sequence = TTTGAATGAACATTCAAA Site: position = -33 score = 4.24312 sequence = CTTGAATGCATATTCAAG Gene: Sbal_1249: NADH-dependent flavin oxidoreductase, Oye family |
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Shewanella denitrificans OS217 Site: position = -81 score = 4.72965 sequence = TTTGAAAAATTATTCAAA Site: position = -58 score = 4.2147 sequence = CTTGAATGAATGTTCAAA Site: position = -31 score = 4.01819 sequence = CTTGAATGCACATTCAAG Gene: Sden_1230: NADH-dependent flavin oxidoreductase, Oye family |
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Shewanella frigidimarina NCIMB 400 Site: position = -33 score = 4.24312 sequence = CTTGAATGCATATTCAAG Site: position = -61 score = 4.3897 sequence = CTTGAATGTGCATTCAAT Gene: Sfri_1089: NADH-dependent flavin oxidoreductase, Oye family |
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Shewanella amazonensis SB2B Site: position = -61 score = 4.03583 sequence = CTTGAATGTATGTTCAAG Site: position = -85 score = 4.54303 sequence = TTTGAATGTATGTTCAAA Site: position = -34 score = 3.66181 sequence = TTTGAATGCCTGTTCAAA Gene: Sama_2407: NADH-dependent flavin oxidoreductase, Oye family |
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Shewanella loihica PV-4 Site: position = -83 score = 4.24337 sequence = TTTGAATGAACGTTCAAA Gene: Shew_3098: NADH-dependent flavin oxidoreductase, Oye family |
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Shewanella piezotolerans WP3 Site: position = -83 score = 4.4683 sequence = TTTGAATGTTTGTTCAAA Site: position = -32 score = 4.4427 sequence = CTTGAATGTTCATTCAAG Site: position = -59 score = 4.8465 sequence = CTTGAATGATTATTCAAA Gene: swp_0975: NADH-dependent flavin oxidoreductase, Oye family |
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Shewanella sediminis HAW-EB3 Site: position = -32 score = 4.4427 sequence = CTTGAATGAACATTCAAG Site: position = -59 score = 3.91505 sequence = CTTGAATGATCGTTCAAA Site: position = -83 score = 4.4683 sequence = TTTGAATGTTTGTTCAAA Gene: Ssed_3644: NADH-dependent flavin oxidoreductase, Oye family |
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Shewanella woodyi ATCC 51908 Site: position = -59 score = 3.91505 sequence = CTTGAATGATCGTTCAAA Site: position = -83 score = 4.4683 sequence = TTTGAATGTTTGTTCAAA Site: position = -32 score = 4.4427 sequence = CTTGAATGAACATTCAAG Gene: Swoo_4055: NADH-dependent flavin oxidoreductase, Oye family |
NADH-dependent flavin oxidoreductase, Oye family |
| CRON 10. | |||||||||||||||||
| argA |
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Shewanella oneidensis MR-1 Site: position = -141 score = 4.34734 sequence = TTTGAAAATATAAGCACT Site: position = -79 score = 5.35925 sequence = GGTGAATTAAAATGCAAT Gene: SO_4245: N-acetylglutamate synthase (EC 2.3.1.1) |
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Shewanella putrefaciens CN-32 Site: position = -96 score = 5.45306 sequence = TGTGAATTAAAATGCAAT Site: position = -117 score = 3.89069 sequence = AGTGAGAATAAATTCTTT Gene: Sputcn32_0465: N-acetylglutamate synthase (EC 2.3.1.1) |
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Shewanella sp W3-18-1 Site: position = -96 score = 5.45306 sequence = TGTGAATTAAAATGCAAT Site: position = -117 score = 3.89069 sequence = AGTGAGAATAAATTCTTT Gene: Sputw3181_0368: N-acetylglutamate synthase (EC 2.3.1.1) |
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Shewanella sp ANA-3 Site: position = -141 score = 4.34734 sequence = TTTGAAAATATAAGCACT Site: position = -79 score = 5.35925 sequence = GGTGAATTAAAATGCAAT Gene: Shewana3_3767: N-acetylglutamate synthase (EC 2.3.1.1) |
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Shewanella sp MR-4 Site: position = -141 score = 4.34734 sequence = TTTGAAAATATAAGCACT Site: position = -79 score = 5.35925 sequence = GGTGAATTAAAATGCAAT Gene: Shewmr4_3594: N-acetylglutamate synthase (EC 2.3.1.1) |
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Shewanella sp MR-7 Site: position = -79 score = 5.35925 sequence = GGTGAATTAAAATGCAAT Site: position = -100 score = 3.84616 sequence = AATGAGAATAAATTCTTT Gene: Shewmr7_0362: N-acetylglutamate synthase (EC 2.3.1.1) |
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Shewanella baltica OS155 Site: position = -97 score = 5.45306 sequence = TGTGAATTAAAATGCAAT Site: position = -118 score = 3.84616 sequence = AATGAGAATAAATTCTTT Gene: Sbal_0380: N-acetylglutamate synthase (EC 2.3.1.1) |
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Shewanella denitrificans OS217 Site: position = -212 score = 4.28143 sequence = TCTGTAATAAAATGCACT Site: position = -144 score = 5.38528 sequence = ACTGCATTAAAATGCAAT Site: position = -123 score = 4.01277 sequence = ATTGCGTTTTTATTGATG Gene: Sden_0329: N-acetylglutamate synthase (EC 2.3.1.1) |
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Shewanella frigidimarina NCIMB 400 Site: position = -130 score = 4.2216 sequence = AGTGAAATAAAATGCTTT Site: position = -109 score = 5.57097 sequence = AGTGAATTAAAATGCAAT Gene: Sfri_3825: N-acetylglutamate synthase (EC 2.3.1.1) |
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Shewanella amazonensis SB2B Site: position = -86 score = 5.66894 sequence = TGTGAATTTAAATTCACT Gene: Sama_0330: N-acetylglutamate synthase (EC 2.3.1.1) |
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Shewanella loihica PV-4 Site: position = -80 score = 5.52778 sequence = TGTGAATTTAAATGCAAT Gene: Shew_3478: N-acetylglutamate synthase (EC 2.3.1.1) |
*
Shewanella pealeana ATCC 700345 Site: position = -120 score = 4.25804 sequence = AGTGAAAATAAATGCTTT Site: position = -99 score = 5.60116 sequence = AATGAATTTAAATGCAAT Site: position = -34 score = 4.36554 sequence = GGTGAATATCTATTTATT Gene: Spea_3834: N-acetylglutamate synthase (EC 2.3.1.1) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -100 score = 5.60116 sequence = AATGAATTTAAATGCACT Gene: Shal_0432: N-acetylglutamate synthase (EC 2.3.1.1) |
*
Shewanella piezotolerans WP3 Site: position = -110 score = 3.74953 sequence = AGTGATAATAAATGCTTT Site: position = -89 score = 5.42981 sequence = ATTGCATTAAAATGCAAT Gene: swp_2207: N-acetylglutamate synthase (EC 2.3.1.1) |
*
Shewanella sediminis HAW-EB3 Site: position = -88 score = 5.3119 sequence = TTTGCATTAAAATGCAAT Site: position = -199 score = 4.91604 sequence = ACTCAATAAAAATTCACA Gene: Ssed_0388: N-acetylglutamate synthase (EC 2.3.1.1) |
*
Shewanella woodyi ATCC 51908 Site: position = -198 score = 4.87775 sequence = TGTGAAAAAATATTCAGT Site: position = -84 score = 5.57097 sequence = AGTGAATTAAAATGCAAT Gene: Swoo_4558: N-acetylglutamate synthase (EC 2.3.1.1) |
N-acetylglutamate synthase (EC 2.3.1.1) |
| CRON 11. | |||||||||||||||||
| oadG |
|
*
Shewanella putrefaciens CN-32 Site: position = -133 score = 4.01528 sequence = TGTGATTTTATATGCTGC Site: position = -154 score = 4.30434 sequence = TGTGAATATTTAGTCTTT Site: position = -265 score = 4.34109 sequence = TATCCTTATAAATTCACT Gene: Sputcn32_1029: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
*
Shewanella sp W3-18-1 Site: position = -265 score = 4.34109 sequence = TATCCTTATAAATTCACT Site: position = -154 score = 4.30434 sequence = TGTGAATATTTAGTCTTT Site: position = -133 score = 4.01528 sequence = TGTGATTTTATATGCTGC Gene: Sputw3181_3136: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
Gene: Shewana3_3166: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
Gene: Shewmr4_2987: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
*
Shewanella sp MR-7 Site: position = -322 score = 3.88154 sequence = ATTCAATTTAAAGGCCAT Site: position = -176 score = 3.7252 sequence = AACGAATGTTCATTTAAT Gene: Shewmr7_3069: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
*
Shewanella baltica OS155 Site: position = -139 score = 4.92952 sequence = TGTGATTTTTTATTCAAA Gene: Sbal_1024: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
|
*
Shewanella frigidimarina NCIMB 400 Site: position = -182 score = 3.77778 sequence = GTTGAATAATCGTTGAGT Site: position = -165 score = 4.6225 sequence = TTTGAATATTTATGCTTT Gene: Sfri_1065: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
*
Shewanella amazonensis SB2B Site: position = -352 score = 4.06143 sequence = ACTGCATATACTTCCACT Site: position = -307 score = 3.59421 sequence = TCTGCCCATGAATGCAGT Gene: Sama_1051: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
*
Shewanella loihica PV-4 Site: position = -331 score = 4.04144 sequence = ATTCAATTTTCAAGCAGA Site: position = -377 score = 4.29578 sequence = ATTGCATAATCTTGCATA Gene: Shew_1219: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
*
Shewanella pealeana ATCC 700345 Site: position = -73 score = 4.23804 sequence = TGTGAATGAATAGTGAAT Site: position = -62 score = 4.05714 sequence = AGTGAATATTTATTTTTA Gene: Spea_1198: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -63 score = 4.78395 sequence = GGTGAATATTTATTGAGT Site: position = -43 score = 4.14016 sequence = CATCCATGTTTATTCACA Gene: Shal_1235: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
*
Shewanella piezotolerans WP3 Site: position = -136 score = 4.41843 sequence = TGTGAATAAATAGTGATT Site: position = -157 score = 3.59866 sequence = TATCAACAGAAATGCATA Gene: swp_1378: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
*
Shewanella sediminis HAW-EB3 Site: position = -322 score = 4.42799 sequence = ACTGCATAACTTTTCATT Gene: Ssed_1320: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
*2
Shewanella woodyi ATCC 51908 Site: position = -110 score = 4.41895 sequence = AATGAATAAAAAGTTATT Gene: Swoo_3337: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) Gene: Swoo_1739: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
| oadA |
|
Gene: Sputcn32_1030: Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3) |
Gene: Sputw3181_3135: Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3) |
Gene: Shewana3_3165: Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3) |
Gene: Shewmr4_2986: Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3) |
Gene: Shewmr7_3068: Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3) |
Gene: Sbal_1025: Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3) |
|
Gene: Sfri_1066: Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3) |
Gene: Sama_1052: Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3) |
Gene: Shew_1220: Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3) |
Gene: Spea_1199: Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3) |
Gene: Shal_1236: Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3) |
Gene: swp_1379: Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3) |
Gene: Ssed_1321: Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3) |
2
Shewanella woodyi ATCC 51908 Gene: Swoo_1740: Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3) Gene: Swoo_3336: Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3) |
Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3) |
| oadB |
|
Gene: Sputcn32_1031: Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3) |
Gene: Sputw3181_3134: Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3) |
Gene: Shewana3_3164: Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3) |
Gene: Shewmr4_2985: Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3) |
Gene: Shewmr7_3067: Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3) |
Gene: Sbal_1026: Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3) |
|
Gene: Sfri_1067: Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3) |
Gene: Sama_1053: Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3) |
Gene: Shew_1221: Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3) |
Gene: Spea_1200: Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3) |
Gene: Shal_1237: Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3) |
Gene: swp_1380: Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3) |
Gene: Ssed_1322: Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3) |
2
Shewanella woodyi ATCC 51908 Gene: Swoo_1741: Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3) Gene: Swoo_3335: Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3) |
Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3) |
| CRON 12. | |||||||||||||||||
| SO2306 |
Gene: SO_2306: Cell division protein FtsK |
Gene: Sputcn32_2011: Cell division protein FtsK |
Gene: Sputw3181_2001: Cell division protein FtsK |
Gene: Shewana3_2050: Cell division protein FtsK |
Gene: Shewmr4_1963: Cell division protein FtsK |
Gene: Shewmr7_2013: Cell division protein FtsK |
Gene: Sbal_2156: Cell division protein FtsK |
Gene: Sden_1743: Cell division protein FtsK |
Gene: Sfri_1795: Cell division protein FtsK |
Gene: Sama_1772: Cell division protein FtsK |
Gene: Shew_2024: Cell division protein FtsK |
*
Shewanella pealeana ATCC 700345 Site: position = -104 score = 5.37932 sequence = GGTGAATAAATATTCAGT Gene: Spea_2233: Cell division protein FtsK |
*
Shewanella halifaxensis HAW-EB4 Site: position = -103 score = 4.90545 sequence = TATGCATAACTATTCAGT Gene: Shal_2217: Cell division protein FtsK |
*
Shewanella piezotolerans WP3 Site: position = -104 score = 5.01842 sequence = TGTGAATACTTATTCACT Gene: swp_2592: Cell division protein FtsK |
Gene: Ssed_2127: Cell division protein FtsK |
Gene: Swoo_2483: Cell division protein FtsK |
Cell division protein FtsK |
| CRON 13. | |||||||||||||||||
| SO0762 |
*
Shewanella oneidensis MR-1 Site: position = -195 score = 4.60258 sequence = TGTGCCTAAAAATGCACC Gene: SO_0762: Isochorismate hydrolase (EC 3.3.2.1) |
Gene: Sputcn32_3242: Isochorismate hydrolase (EC 3.3.2.1) |
Gene: Sputw3181_0699: Isochorismate hydrolase (EC 3.3.2.1) |
*
Shewanella sp ANA-3 Site: position = -195 score = 4.05846 sequence = ACCGATTAAAAATGCACC Site: position = -234 score = 3.87766 sequence = ATTGATTTTAAATAAATA Gene: Shewana3_3533: Isochorismate hydrolase (EC 3.3.2.1) |
*
Shewanella sp MR-4 Site: position = -194 score = 3.98508 sequence = TTCGATTAAAAATGCACC Site: position = -248 score = 3.83558 sequence = CCAGAATTTTAATTTATT Gene: Shewmr4_3363: Isochorismate hydrolase (EC 3.3.2.1) |
*
Shewanella sp MR-7 Site: position = -265 score = 3.83558 sequence = CCAGAATTTTAATTTATT Site: position = -211 score = 3.98508 sequence = TTCGATTAAAAATGCACC Gene: Shewmr7_0590: Isochorismate hydrolase (EC 3.3.2.1) |
Gene: Sbal_0796: Isochorismate hydrolase (EC 3.3.2.1) |
Gene: Sden_2854: Isochorismate hydrolase (EC 3.3.2.1) |
*
Shewanella frigidimarina NCIMB 400 Site: position = -114 score = 4.35232 sequence = TCTGAGTGAACATTCATA Gene: Sfri_0893: Isochorismate hydrolase (EC 3.3.2.1) |
Gene: Sama_0649: Isochorismate hydrolase (EC 3.3.2.1) |
*
Shewanella loihica PV-4 Site: position = -139 score = 4.99829 sequence = GCTGCATATAAATGCACC Gene: Shew_0845: Isochorismate hydrolase (EC 3.3.2.1) |
*
Shewanella pealeana ATCC 700345 Site: position = -152 score = 4.88303 sequence = CGTGCATATAAATGCACC Gene: Spea_0832: Isochorismate hydrolase (EC 3.3.2.1) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -155 score = 4.42581 sequence = AACGCATAAAAATGCACC Gene: Shal_0887: Isochorismate hydrolase (EC 3.3.2.1) |
*
Shewanella piezotolerans WP3 Site: position = -151 score = 4.52674 sequence = TATAAATATAAATGCACC Gene: swp_3957: Isochorismate hydrolase (EC 3.3.2.1) |
Gene: Ssed_0932: Isochorismate hydrolase (EC 3.3.2.1) |
*
Shewanella woodyi ATCC 51908 Site: position = -125 score = 4.1968 sequence = TGCGCATAAAAACTCAAT Gene: Swoo_0978: Isochorismate hydrolase (EC 3.3.2.1) |
Isochorismate hydrolase (EC 3.3.2.1) |
| CRON 14. | |||||||||||||||||
| argW |
*
Shewanella oneidensis MR-1 Site: position = -99 score = 4.8398 sequence = GTTGAATGAAAATGCAGC Gene: SO_1245: Predicted arginine uptake transporter, COG3314 family |
*
Shewanella putrefaciens CN-32 Site: position = -124 score = 4.88433 sequence = GTTGAATGAAAATGCACC Gene: Sputcn32_2808: Predicted arginine uptake transporter, COG3314 family |
*
Shewanella sp W3-18-1 Site: position = -124 score = 4.88433 sequence = GTTGAATGAAAATGCACC Gene: Sputw3181_1204: Predicted arginine uptake transporter, COG3314 family |
*
Shewanella sp ANA-3 Site: position = -99 score = 4.88433 sequence = GTTGAATGAAAATGCACC Gene: Shewana3_1062: Predicted arginine uptake transporter, COG3314 family |
*
Shewanella sp MR-4 Site: position = -98 score = 4.8398 sequence = GTTGAATGAAAATGCATC Gene: Shewmr4_1058: Predicted arginine uptake transporter, COG3314 family |
*
Shewanella sp MR-7 Site: position = -98 score = 4.8398 sequence = GTTGAATGAAAATGCATC Gene: Shewmr7_1129: Predicted arginine uptake transporter, COG3314 family |
*
Shewanella baltica OS155 Site: position = -99 score = 5.22226 sequence = GTTGAATTTAAATGCACC Gene: Sbal_3205: Predicted arginine uptake transporter, COG3314 family |
*
Shewanella denitrificans OS217 Site: position = -98 score = 4.10481 sequence = ACTCTATTTTTATGCAGC Gene: Sden_1037: Predicted arginine uptake transporter, COG3314 family |
*
Shewanella frigidimarina NCIMB 400 Site: position = -88 score = 4.83392 sequence = ACTGAATGGACATTCAAT Gene: Sfri_1012: Predicted arginine uptake transporter, COG3314 family |
*
Shewanella amazonensis SB2B Site: position = -102 score = 4.18009 sequence = CCTGCATGGACATGCACT Gene: Sama_0994: Predicted arginine uptake transporter, COG3314 family |
*
Shewanella loihica PV-4 Site: position = -90 score = 4.5249 sequence = CATGAATGGATATTCAGA Gene: Shew_2790: Predicted arginine uptake transporter, COG3314 family |
*
Shewanella pealeana ATCC 700345 Site: position = -93 score = 4.89166 sequence = GTTGAATGGATATTCAAT Gene: Spea_3024: Predicted arginine uptake transporter, COG3314 family |
*
Shewanella halifaxensis HAW-EB4 Site: position = -91 score = 4.89166 sequence = GTTGAATGGATATTCAAT Gene: Shal_3114: Predicted arginine uptake transporter, COG3314 family |
*
Shewanella piezotolerans WP3 Site: position = -90 score = 5.19892 sequence = GTTGAATGAATATTCAAT Gene: swp_1256: Predicted arginine uptake transporter, COG3314 family |
*
Shewanella sediminis HAW-EB3 Site: position = -58 score = 4.82302 sequence = TTTGAATGGATATTCATA Gene: Ssed_3353: Predicted arginine uptake transporter, COG3314 family |
*
Shewanella woodyi ATCC 51908 Site: position = -89 score = 4.64281 sequence = CATGAATGGATATTCAGT Gene: Swoo_3520: Predicted arginine uptake transporter, COG3314 family |
Predicted arginine uptake transporter, COG3314 family |
| CRON 15. | |||||||||||||||||
| astB |
*
Shewanella oneidensis MR-1 Site: position = -142 score = 3.60737 sequence = AAGAAATAGTTATGCATT Site: position = -227 score = 3.99274 sequence = AGTCACTTTTTAATCAAA Site: position = -40 score = 4.09091 sequence = TTTGAATAAATAATAACC Gene: SO_2706: Succinylarginine dihydrolase (EC 3.5.3.23) |
*
Shewanella putrefaciens CN-32 Site: position = -131 score = 4.16122 sequence = TATGCATTTATCGTCAAA Site: position = -225 score = 3.99274 sequence = AGTCACTTTTTAATCAAA Gene: Sputcn32_2251: Succinylarginine dihydrolase (EC 3.5.3.23) |
*
Shewanella sp W3-18-1 Site: position = -225 score = 3.99274 sequence = AGTCACTTTTTAATCAAA Site: position = -131 score = 4.16122 sequence = TATGCATTTATCGTCAAA Gene: Sputw3181_1757: Succinylarginine dihydrolase (EC 3.5.3.23) |
*
Shewanella sp ANA-3 Site: position = -132 score = 3.56585 sequence = TATGCATTTATCGTGAAA Site: position = -227 score = 3.99274 sequence = AGTCACTTTTTAATCAAA Site: position = -40 score = 4.09091 sequence = TTTGAATAAATAATAACC Gene: Shewana3_1728: Succinylarginine dihydrolase (EC 3.5.3.23) |
*
Shewanella sp MR-4 Site: position = -227 score = 3.99274 sequence = AGTCACTTTTTAATCAAA Site: position = -142 score = 3.60737 sequence = AAGAAATAGTTATGCATT Gene: Shewmr4_1584: Succinylarginine dihydrolase (EC 3.5.3.23) |
*
Shewanella sp MR-7 Site: position = -142 score = 3.60737 sequence = AAGAAATAGTTATGCATT Site: position = -227 score = 3.99274 sequence = AGTCACTTTTTAATCAAA Gene: Shewmr7_1659: Succinylarginine dihydrolase (EC 3.5.3.23) |
*
Shewanella baltica OS155 Site: position = -40 score = 3.55158 sequence = TATGAACAAATAATAACT Site: position = -132 score = 3.56585 sequence = TATGCATTTATCGTGAAA Site: position = -226 score = 3.99274 sequence = AGTCACTTTTTAATCAAA Gene: Sbal_2497: Succinylarginine dihydrolase (EC 3.5.3.23) |
*
Shewanella denitrificans OS217 Site: position = -201 score = 4.65267 sequence = CTTGCATTTTTAATCACT Gene: Sden_2329: Succinylarginine dihydrolase (EC 3.5.3.23) |
*
Shewanella frigidimarina NCIMB 400 Site: position = -186 score = 5.02884 sequence = AGTGCATTTTTAGTCATT Gene: Sfri_2479: Succinylarginine dihydrolase (EC 3.5.3.23) |
*
Shewanella amazonensis SB2B Site: position = -147 score = 3.64514 sequence = AAGCAATAGTTATGCAAA Site: position = -233 score = 4.11065 sequence = AGTCACTTTTTAATCAAT Gene: Sama_1321: Succinylarginine dihydrolase (EC 3.5.3.23) |
Gene: Shew_2225: Succinylarginine dihydrolase (EC 3.5.3.23) |
*
Shewanella pealeana ATCC 700345 Site: position = -137 score = 5.02788 sequence = TGTGCATTTCAATTCAAA Gene: Spea_1534: Succinylarginine dihydrolase (EC 3.5.3.23) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -137 score = 4.60523 sequence = TGTGCATTTTGATGCAAA Site: position = -169 score = 4.1106 sequence = ATTTCATTAATAGTCATC Gene: Shal_1604: Succinylarginine dihydrolase (EC 3.5.3.23) |
*
Shewanella piezotolerans WP3 Site: position = -135 score = 4.60523 sequence = TGTGCATTTTGATGCAAA Site: position = -167 score = 4.03588 sequence = ATTTCATTATTAGTCATC Gene: swp_1743: Succinylarginine dihydrolase (EC 3.5.3.23) |
*
Shewanella sediminis HAW-EB3 Site: position = -322 score = 4.29796 sequence = TGTGCATTTCGATGCAAA Site: position = -354 score = 4.03588 sequence = ATTTCATTATTAGTCATC Gene: Ssed_2842: Succinylarginine dihydrolase (EC 3.5.3.23) |
*
Shewanella woodyi ATCC 51908 Site: position = -204 score = 5.02788 sequence = TGTGAATTTCAATGCAAA Site: position = -236 score = 4.03588 sequence = ATTTCATTATTAGTCATC Gene: Swoo_1802: Succinylarginine dihydrolase (EC 3.5.3.23) |
Succinylarginine dihydrolase (EC 3.5.3.23) |
| CRON 16. | |||||||||||||||||
| ilvG |
*
Shewanella oneidensis MR-1 Site: position = -216 score = 4.16741 sequence = CGTGATTATTAAATCACA Gene: SO_4347: Acetolactate synthase large subunit (EC 2.2.1.6) |
*
Shewanella putrefaciens CN-32 Site: position = -214 score = 4.16741 sequence = CGTGATTATTAAATCACA Gene: Sputcn32_3614: Acetolactate synthase large subunit (EC 2.2.1.6) |
*
Shewanella sp W3-18-1 Site: position = -214 score = 4.16741 sequence = CGTGATTATTAAATCACA Gene: Sputw3181_3754: Acetolactate synthase large subunit (EC 2.2.1.6) |
*
Shewanella sp ANA-3 Site: position = -201 score = 4.53892 sequence = AGTGATTATTAAATCACA Gene: Shewana3_0356: Acetolactate synthase large subunit (EC 2.2.1.6) |
*
Shewanella sp MR-4 Site: position = -201 score = 4.53892 sequence = AGTGATTATTAAATCACA Gene: Shewmr4_0362: Acetolactate synthase large subunit (EC 2.2.1.6) |
*
Shewanella sp MR-7 Site: position = -219 score = 4.53892 sequence = AGTGATTATTAAATCACA Gene: Shewmr7_3664: Acetolactate synthase large subunit (EC 2.2.1.6) |
|
*
Shewanella denitrificans OS217 Site: position = -153 score = 4.58811 sequence = AGTGATTATTAAGTCACA Gene: Sden_3414: Acetolactate synthase large subunit (EC 2.2.1.6) |
*
Shewanella frigidimarina NCIMB 400 Site: position = -202 score = 4.58811 sequence = AGTGATTATTAAGTCACA Gene: Sfri_0422: Acetolactate synthase large subunit (EC 2.2.1.6) |
*
Shewanella amazonensis SB2B Site: position = -157 score = 4.53892 sequence = AGTGATTATTAAATCACA Gene: Sama_3281: Acetolactate synthase large subunit (EC 2.2.1.6) |
*
Shewanella loihica PV-4 Site: position = -166 score = 4.53892 sequence = AGTGATTATTAAATCACA Gene: Shew_0289: Acetolactate synthase large subunit (EC 2.2.1.6) |
*
Shewanella pealeana ATCC 700345 Site: position = -181 score = 4.16741 sequence = CGTGATTATTAAATCACA Gene: Spea_0345: Acetolactate synthase large subunit (EC 2.2.1.6) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -193 score = 4.16741 sequence = CGTGATTATTAAATCACA Gene: Shal_3944: Acetolactate synthase large subunit (EC 2.2.1.6) |
*
Shewanella piezotolerans WP3 Site: position = -189 score = 4.16741 sequence = CGTGATTATTAAATCACA Gene: swp_0359: Acetolactate synthase large subunit (EC 2.2.1.6) |
Gene: Ssed_4165: Acetolactate synthase large subunit (EC 2.2.1.6) |
*
Shewanella woodyi ATCC 51908 Site: position = -190 score = 4.16741 sequence = CGTGATTATTAAATCACA Gene: Swoo_0442: Acetolactate synthase large subunit (EC 2.2.1.6) |
Acetolactate synthase large subunit (EC 2.2.1.6) |
| ilvM |
Gene: SO_4346: Acetolactate synthase small subunit (EC 2.2.1.6) |
Gene: Sputcn32_3613: Acetolactate synthase small subunit (EC 2.2.1.6) |
Gene: Sputw3181_3753: Acetolactate synthase small subunit (EC 2.2.1.6) |
Gene: Shewana3_0357: Acetolactate synthase small subunit (EC 2.2.1.6) |
Gene: Shewmr4_0363: Acetolactate synthase small subunit (EC 2.2.1.6) |
Gene: Shewmr7_3663: Acetolactate synthase small subunit (EC 2.2.1.6) |
|
Gene: Sden_3413: Acetolactate synthase small subunit (EC 2.2.1.6) |
Gene: Sfri_0423: Acetolactate synthase small subunit (EC 2.2.1.6) |
Gene: Sama_3280: Acetolactate synthase small subunit (EC 2.2.1.6) |
Gene: Shew_0290: Acetolactate synthase small subunit (EC 2.2.1.6) |
Gene: Spea_0346: Acetolactate synthase small subunit (EC 2.2.1.6) |
Gene: Shal_3943: Acetolactate synthase small subunit (EC 2.2.1.6) |
Gene: swp_0360: Acetolactate synthase small subunit (EC 2.2.1.6) |
Gene: Ssed_4164: Acetolactate synthase small subunit (EC 2.2.1.6) |
Gene: Swoo_0443: Acetolactate synthase small subunit (EC 2.2.1.6) |
Acetolactate synthase small subunit (EC 2.2.1.6) |
| ilvE |
|
|
|
|
|
|
|
|
|
|
Gene: Shew_0291: Branched-chain amino acid aminotransferase (EC 2.6.1.42) |
Gene: Spea_0347: Branched-chain amino acid aminotransferase (EC 2.6.1.42) |
Gene: Shal_3942: Branched-chain amino acid aminotransferase (EC 2.6.1.42) |
Gene: swp_0361: Branched-chain amino acid aminotransferase (EC 2.6.1.42) |
Gene: Ssed_4163: Branched-chain amino acid aminotransferase (EC 2.6.1.42) |
Gene: Swoo_0444: Branched-chain amino acid aminotransferase (EC 2.6.1.42) |
Branched-chain amino acid aminotransferase (EC 2.6.1.42) |
| ilvD |
Gene: SO_4345: Dihydroxy-acid dehydratase (EC 4.2.1.9) |
Gene: Sputcn32_3612: Dihydroxy-acid dehydratase (EC 4.2.1.9) |
Gene: Sputw3181_3752: Dihydroxy-acid dehydratase (EC 4.2.1.9) |
Gene: Shewana3_0358: Dihydroxy-acid dehydratase (EC 4.2.1.9) |
Gene: Shewmr4_0364: Dihydroxy-acid dehydratase (EC 4.2.1.9) |
Gene: Shewmr7_3662: Dihydroxy-acid dehydratase (EC 4.2.1.9) |
|
Gene: Sden_3412: Dihydroxy-acid dehydratase (EC 4.2.1.9) |
Gene: Sfri_0424: Dihydroxy-acid dehydratase (EC 4.2.1.9) |
Gene: Sama_3279: Dihydroxy-acid dehydratase (EC 4.2.1.9) |
Gene: Shew_0292: Dihydroxy-acid dehydratase (EC 4.2.1.9) |
Gene: Spea_0348: Dihydroxy-acid dehydratase (EC 4.2.1.9) |
Gene: Shal_3941: Dihydroxy-acid dehydratase (EC 4.2.1.9) |
Gene: swp_0362: Dihydroxy-acid dehydratase (EC 4.2.1.9) |
Gene: Ssed_4162: Dihydroxy-acid dehydratase (EC 4.2.1.9) |
Gene: Swoo_0445: Dihydroxy-acid dehydratase (EC 4.2.1.9) |
Dihydroxy-acid dehydratase (EC 4.2.1.9) |
| ilvA |
Gene: SO_4344: Threonine dehydratase biosynthetic (EC 4.3.1.19) |
Gene: Sputcn32_3611: Threonine dehydratase biosynthetic (EC 4.3.1.19) |
Gene: Sputw3181_3751: Threonine dehydratase biosynthetic (EC 4.3.1.19) |
Gene: Shewana3_0359: Threonine dehydratase biosynthetic (EC 4.3.1.19) |
Gene: Shewmr4_0365: Threonine dehydratase biosynthetic (EC 4.3.1.19) |
Gene: Shewmr7_3661: Threonine dehydratase biosynthetic (EC 4.3.1.19) |
|
Gene: Sden_3411: Threonine dehydratase biosynthetic (EC 4.3.1.19) |
Gene: Sfri_0425: Threonine dehydratase biosynthetic (EC 4.3.1.19) |
Gene: Sama_3278: Threonine dehydratase biosynthetic (EC 4.3.1.19) |
Gene: Shew_0293: Threonine dehydratase biosynthetic (EC 4.3.1.19) |
Gene: Spea_0349: Threonine dehydratase biosynthetic (EC 4.3.1.19) |
Gene: Shal_3940: Threonine dehydratase biosynthetic (EC 4.3.1.19) |
Gene: swp_0363: Threonine dehydratase biosynthetic (EC 4.3.1.19) |
Gene: Ssed_4161: Threonine dehydratase biosynthetic (EC 4.3.1.19) |
Gene: Swoo_0446: Threonine dehydratase biosynthetic (EC 4.3.1.19) |
Threonine dehydratase biosynthetic (EC 4.3.1.19) |
| CRON 17. | |||||||||||||||||
| argB |
*
Shewanella oneidensis MR-1 Site: position = -60 score = 4.94392 sequence = AGTGCATAAAGATTCACT Gene: SO_0276: Acetylglutamate kinase (EC 2.7.2.8) |
*
Shewanella putrefaciens CN-32 Site: position = -60 score = 4.85486 sequence = AATGCATAAAGATTCATT Gene: Sputcn32_3716: Acetylglutamate kinase (EC 2.7.2.8) |
*
Shewanella sp W3-18-1 Site: position = -60 score = 4.85486 sequence = AATGCATAAAGATTCATT Gene: Sputw3181_3859: Acetylglutamate kinase (EC 2.7.2.8) |
*
Shewanella sp ANA-3 Site: position = -60 score = 4.89939 sequence = AATGCATAAAGATTCACT Gene: Shewana3_3904: Acetylglutamate kinase (EC 2.7.2.8) |
*
Shewanella sp MR-4 Site: position = -60 score = 4.89939 sequence = AATGCATAAAGATTCACT Gene: Shewmr4_3708: Acetylglutamate kinase (EC 2.7.2.8) |
*
Shewanella sp MR-7 Site: position = -60 score = 4.89939 sequence = AATGCATAAAGATTCACT Gene: Shewmr7_0237: Acetylglutamate kinase (EC 2.7.2.8) |
*
Shewanella baltica OS155 Site: position = -60 score = 4.85486 sequence = AATGCATAAAGATTCATT Gene: Sbal_4123: Acetylglutamate kinase (EC 2.7.2.8) |
*
Shewanella denitrificans OS217 Site: position = -53 score = 4.89939 sequence = AGTGCATAAAGATTCATT Gene: Sden_0251: Acetylglutamate kinase (EC 2.7.2.8) |
*
Shewanella frigidimarina NCIMB 400 Site: position = -59 score = 4.88356 sequence = AGTGCATTAAAATCCATT Gene: Sfri_0192: Acetylglutamate kinase (EC 2.7.2.8) |
*
Shewanella amazonensis SB2B Site: position = -44 score = 5.44363 sequence = AATGCATAAAAATTCATT Gene: Sama_0257: Acetylglutamate kinase (EC 2.7.2.8) |
*
Shewanella loihica PV-4 Site: position = -57 score = 4.85486 sequence = AATGCATAAAGATTCATT Gene: Shew_0203: Acetylglutamate kinase (EC 2.7.2.8) |
*
Shewanella pealeana ATCC 700345 Site: position = -56 score = 4.94392 sequence = AGTGCATAAAGATTCACT Gene: Spea_0228: Acetylglutamate kinase (EC 2.7.2.8) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -53 score = 4.89939 sequence = AGTGCATAAAGATTCATT Gene: Shal_4092: Acetylglutamate kinase (EC 2.7.2.8) |
*
Shewanella piezotolerans WP3 Site: position = -55 score = 4.85486 sequence = AATGCATAAAGATTCATT Gene: swp_2056: Acetylglutamate kinase (EC 2.7.2.8) |
*
Shewanella sediminis HAW-EB3 Site: position = -51 score = 4.40016 sequence = AATGCATAAGGATTCACT Gene: Ssed_4275: Acetylglutamate kinase (EC 2.7.2.8) |
*
Shewanella woodyi ATCC 51908 Site: position = -51 score = 4.89939 sequence = AGTGCATAAAGATTCATT Gene: Swoo_0330: Acetylglutamate kinase (EC 2.7.2.8) |
Acetylglutamate kinase (EC 2.7.2.8) |
| argF |
Gene: SO_0277: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: Sputcn32_3715: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: Sputw3181_3858: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: Shewana3_3903: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: Shewmr4_3707: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: Shewmr7_0238: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: Sbal_4122: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: Sden_0252: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: Sfri_0193: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: Sama_0258: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: Shew_0204: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: Spea_0229: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: Shal_4091: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: swp_2057: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: Ssed_4274: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: Swoo_0331: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Ornithine carbamoyltransferase (EC 2.1.3.3) |
| argG |
Gene: SO_0278: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: Sputcn32_3714: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: Sputw3181_3857: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: Shewana3_3902: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: Shewmr4_3706: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: Shewmr7_0239: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: Sbal_4121: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: Sden_0253: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: Sfri_0194: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: Sama_0259: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: Shew_0205: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: Spea_0230: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: Shal_4090: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: swp_2058: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: Ssed_4273: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: Swoo_0332: Argininosuccinate synthase (EC 6.3.4.5) |
Argininosuccinate synthase (EC 6.3.4.5) |
| argH |
Gene: SO_0279: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: Sputcn32_3713: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: Sputw3181_3856: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: Shewana3_3901: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: Shewmr4_3705: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: Shewmr7_0240: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: Sbal_4120: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: Sden_0254: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: Sfri_0195: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: Sama_0260: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: Shew_0206: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: Spea_0231: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: Shal_4089: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: swp_2059: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: Ssed_4272: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: Swoo_0333: Argininosuccinate lyase (EC 4.3.2.1) |
Argininosuccinate lyase (EC 4.3.2.1) |
| CRON 18. | |||||||||||||||||
| SO1915 |
*
Shewanella oneidensis MR-1 Site: position = -63 score = 4.55489 sequence = GCTGAATAAATATTAAAA Gene: SO_1915: Serine protease, subtilase family |
|
|
*
Shewanella sp ANA-3 Site: position = -61 score = 4.76661 sequence = ACTGAATAAATATTAAAA Site: position = -206 score = 4.51449 sequence = GATGAATGTTTATTGAGT Gene: Shewana3_1690: Serine protease, subtilase family |
|
|
*
Shewanella baltica OS155 Site: position = -121 score = 4.86621 sequence = ATTGAATGGTTATTCATA Gene: Sbal_2816: Serine protease, subtilase family |
|
|
|
|
|
|
|
|
Gene: Swoo_1500: Serine protease, subtilase family |
Serine protease, subtilase family |
| CRON 19. | |||||||||||||||||
| argE |
|
|
|
|
|
|
|
|
Gene: Sfri_0190: Acetylornithine deacetylase (EC 3.5.1.16) |
*
Shewanella amazonensis SB2B Site: position = -50 score = 3.73954 sequence = ACTCTTTAATTATGCAAT Gene: Sama_0255: Acetylornithine deacetylase (EC 3.5.1.16) |
*
Shewanella loihica PV-4 Site: position = -53 score = 4.17951 sequence = TATGCAATAATATTGAAT Gene: Shew_0201: Acetylornithine deacetylase (EC 3.5.1.16) |
*
Shewanella pealeana ATCC 700345 Site: position = -27 score = 3.76036 sequence = TTTGAATATATATTTGGG Gene: Spea_0226: Acetylornithine deacetylase (EC 3.5.1.16) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -26 score = 4.46983 sequence = TTTGAATATATATTTAGG Site: position = -122 score = 3.76257 sequence = ATTGAACATATATACTCT Gene: Shal_4094: Acetylornithine deacetylase (EC 3.5.1.16) |
*
Shewanella piezotolerans WP3 Site: position = -27 score = 4.46983 sequence = TTTGAATATATATTTAGG Site: position = -143 score = 3.39132 sequence = AATACTTAATAATTGAAC Gene: swp_2054: Acetylornithine deacetylase (EC 3.5.1.16) |
*
Shewanella sediminis HAW-EB3 Site: position = -27 score = 3.96468 sequence = TTTGAATATATATTTTAC Site: position = -48 score = 3.49984 sequence = ACAAACTAATTATGCAAT Gene: Ssed_4277: Acetylornithine deacetylase (EC 3.5.1.16) |
*
Shewanella woodyi ATCC 51908 Site: position = -28 score = 3.96468 sequence = TTTGAATATATATTTTAC Gene: Swoo_0328: Acetylornithine deacetylase (EC 3.5.1.16) |
Acetylornithine deacetylase (EC 3.5.1.16) |
| CRON 20. | |||||||||||||||||
| argR |
*
Shewanella oneidensis MR-1 Site: position = -93 score = 5.48816 sequence = ATTGCATTTTTATTCAGT Gene: SO_0769: Arginine metabolism transcriptional regulator ArgR |
*
Shewanella putrefaciens CN-32 Site: position = -96 score = 5.46213 sequence = AGTGAATTTTTATTCAAC Gene: Sputcn32_3220: Arginine metabolism transcriptional regulator ArgR |
*
Shewanella sp W3-18-1 Site: position = -96 score = 5.46213 sequence = AGTGAATTTTTATTCAAC Gene: Sputw3181_0721: Arginine metabolism transcriptional regulator ArgR |
*
Shewanella sp ANA-3 Site: position = -93 score = 5.48816 sequence = ATTGCATTTTTATTCAGT Gene: Shewana3_3510: Arginine metabolism transcriptional regulator ArgR |
*
Shewanella sp MR-4 Site: position = -93 score = 5.48816 sequence = ATTGCATTTTTATTCAGT Gene: Shewmr4_3340: Arginine metabolism transcriptional regulator ArgR |
*
Shewanella sp MR-7 Site: position = -93 score = 5.23191 sequence = ACTGCATTTTTATTCATC Gene: Shewmr7_0613: Arginine metabolism transcriptional regulator ArgR |
*
Shewanella baltica OS155 Site: position = -96 score = 5.46213 sequence = AGTGAATTTTTATTCAAC Gene: Sbal_0608: Arginine metabolism transcriptional regulator ArgR |
*
Shewanella denitrificans OS217 Site: position = -89 score = 5.67385 sequence = AGTGAATTTTTATTCACT Gene: Sden_0825: Arginine metabolism transcriptional regulator ArgR |
*
Shewanella frigidimarina NCIMB 400 Site: position = -104 score = 5.62932 sequence = AATGAATTTTTATTCAAT Gene: Sfri_0640: Arginine metabolism transcriptional regulator ArgR |
*
Shewanella amazonensis SB2B Site: position = -98 score = 5.25234 sequence = TCTGCATTTTTATTCACA Gene: Sama_0671: Arginine metabolism transcriptional regulator ArgR |
*
Shewanella loihica PV-4 Site: position = -95 score = 5.1399 sequence = CCTGAATTTTTATTCACA Gene: Shew_0866: Arginine metabolism transcriptional regulator ArgR |
*
Shewanella pealeana ATCC 700345 Site: position = -95 score = 5.46688 sequence = AATGAATTTTTATTCAGA Gene: Spea_0849: Arginine metabolism transcriptional regulator ArgR |
*
Shewanella halifaxensis HAW-EB4 Site: position = -95 score = 5.51141 sequence = AATGAATTTTTATTCACA Gene: Shal_0902: Arginine metabolism transcriptional regulator ArgR |
*
Shewanella piezotolerans WP3 Site: position = -95 score = 5.25781 sequence = CATGAATTTTTATTCAAT Gene: swp_4101: Arginine metabolism transcriptional regulator ArgR |
*
Shewanella sediminis HAW-EB3 Site: position = -95 score = 5.15853 sequence = GTTGCATTTTTATTCATA Gene: Ssed_0951: Arginine metabolism transcriptional regulator ArgR |
*
Shewanella woodyi ATCC 51908 Site: position = -95 score = 4.98892 sequence = ATTGCATTCTTATTCATT Gene: Swoo_1001: Arginine metabolism transcriptional regulator ArgR |
Arginine metabolism transcriptional regulator ArgR |
| CRON 21. | |||||||||||||||||
| argC |
*
Shewanella oneidensis MR-1 Site: position = -127 score = 3.66673 sequence = AGTGAATAAAATAACAAG Site: position = -249 score = 4.01395 sequence = TAAAAATATATATTCACA Site: position = -327 score = 3.60304 sequence = ATTGAAATATTAAGTAGT Gene: SO_0275: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Shewanella putrefaciens CN-32 Site: position = -192 score = 4.16633 sequence = TATGAAAATAAATTAAAA Site: position = -57 score = 3.82652 sequence = AGTGAATAAAATAACAAC Gene: Sputcn32_3717: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Shewanella sp W3-18-1 Site: position = -57 score = 4.03824 sequence = AGTGAATAAAATAACAAT Site: position = -180 score = 4.01395 sequence = TAAAAATATATATTCACA Site: position = -193 score = 4.16633 sequence = TATGAAAATAAATTAAAA Gene: Sputw3181_3860: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Shewanella sp ANA-3 Site: position = -357 score = 3.68256 sequence = ACTGATTTTTCAGTCTTT Site: position = -327 score = 4.35188 sequence = ACTGAGTTATTAAGCAGT Site: position = -249 score = 4.01395 sequence = TAAAAATATATATTCACA Gene: Shewana3_3905: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Shewanella sp MR-4 Site: position = -327 score = 4.35188 sequence = ACTGAGTTATTAAGCAGT Site: position = -249 score = 4.01395 sequence = TAAAAATATATATTCACA Gene: Shewmr4_3709: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Shewanella sp MR-7 Site: position = -327 score = 4.35188 sequence = ACTGAGTTATTAAGCAGT Site: position = -249 score = 4.01395 sequence = TAAAAATATATATTCACA Gene: Shewmr7_0236: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Shewanella baltica OS155 Site: position = -471 score = 4.18466 sequence = ATTCAATATAAATGCGAA Site: position = -252 score = 4.01395 sequence = TAAAAATATATATTCACA Site: position = -130 score = 3.82652 sequence = AGTGAATAAAATAACAAC Gene: Sbal_4124: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Shewanella denitrificans OS217 Site: position = -214 score = 3.73471 sequence = ATTGCATAACAATTTGAT Site: position = -235 score = 4.3421 sequence = AATAAATATGTATTCACA Site: position = -145 score = 4.27152 sequence = ATCGAATATAAAAGCACA Gene: Sden_0250: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
Gene: Sfri_0191: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Shewanella amazonensis SB2B Site: position = -241 score = 3.71311 sequence = AATAGATATTCATGCATA Gene: Sama_0256: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Shewanella loihica PV-4 Site: position = -249 score = 3.74987 sequence = TAAAAATATCTATTCAAT Site: position = -228 score = 3.49984 sequence = ATTGCATAATTAGTTTGT Gene: Shew_0202: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Shewanella pealeana ATCC 700345 Site: position = -266 score = 3.76036 sequence = CCCAAATATATATTCAAA Gene: Spea_0227: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -267 score = 4.46983 sequence = CCTAAATATATATTCAAA Gene: Shal_4093: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Shewanella piezotolerans WP3 Site: position = -266 score = 4.46983 sequence = CCTAAATATATATTCAAA Gene: swp_2055: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Shewanella sediminis HAW-EB3 Site: position = -256 score = 3.96468 sequence = GTAAAATATATATTCAAA Site: position = -235 score = 3.49984 sequence = ATTGCATAATTAGTTTGT Gene: Ssed_4276: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Shewanella woodyi ATCC 51908 Site: position = -263 score = 3.96468 sequence = GTAAAATATATATTCAAA Site: position = -423 score = 3.50566 sequence = TTTGCATTCAAAACCAAG Gene: Swoo_0329: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
| CRON 22. | |||||||||||||||||
| gltB |
*
Shewanella oneidensis MR-1 Site: position = -313 score = 4.34918 sequence = TTTGCAATAAAAATCACT Site: position = -359 score = 4.53786 sequence = AAAGAATAACAATTCACT Gene: SO_1325: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
*
Shewanella putrefaciens CN-32 Site: position = -358 score = 4.70813 sequence = GAAGAATAAAAATTCACT Site: position = -312 score = 4.34918 sequence = TTTGCAATAAAAATCACT Gene: Sputcn32_1136: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
*
Shewanella sp W3-18-1 Site: position = -312 score = 4.34918 sequence = TTTGCAATAAAAATCACT Site: position = -358 score = 4.75266 sequence = GGAGAATAAAAATTCACT Gene: Sputw3181_3028: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
*
Shewanella sp ANA-3 Site: position = -360 score = 4.53786 sequence = ATAGAATAACAATTCATT Site: position = -339 score = 4.01691 sequence = TATAAATTTTTATACATC Site: position = -314 score = 4.34918 sequence = TTTGCAATAAAAATCACT Gene: Shewana3_3050: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
*
Shewanella sp MR-4 Site: position = -313 score = 4.34918 sequence = TTTGCAATAAAAATCACT Site: position = -359 score = 4.53786 sequence = AAAGAATAACAATTCACT Gene: Shewmr4_2872: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
*
Shewanella sp MR-7 Site: position = -359 score = 4.53786 sequence = AAAGAATAACAATTCACT Site: position = -313 score = 4.34918 sequence = TTTGCAATAAAAATCACT Gene: Shewmr7_2954: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
*
Shewanella baltica OS155 Site: position = -361 score = 5.34288 sequence = AATGAATAATAATTCAAC Site: position = -315 score = 4.34918 sequence = TTTGCAATAAAAATCACT Gene: Sbal_1178: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
*
Shewanella denitrificans OS217 Site: position = -359 score = 5.13171 sequence = AGTGAATATTTAGTCAGT Gene: Sden_2790: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
*
Shewanella frigidimarina NCIMB 400 Site: position = -312 score = 4.29233 sequence = TTTAAAATAAAATTCACT Site: position = -358 score = 5.03799 sequence = AATGAATATTTAATCATT Gene: Sfri_2951: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
*
Shewanella amazonensis SB2B Site: position = -362 score = 4.62716 sequence = TTTGAATAGTTAATCAAT Site: position = -316 score = 4.01277 sequence = CCTGCAAAAAAAATCACT Gene: Sama_0857: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
*
Shewanella loihica PV-4 Site: position = -303 score = 4.30465 sequence = TATGCAATAAAAATCACT Site: position = -324 score = 3.8456 sequence = TTTGTTAAATAATTCACT Gene: Shew_1032: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
*
Shewanella pealeana ATCC 700345 Site: position = -309 score = 4.26637 sequence = TCTGCAAAAAAAATCACT Site: position = -330 score = 4.2627 sequence = AGTGATTATCATTTCACT Site: position = -354 score = 4.87264 sequence = AATGCATAAATAGTCACA Gene: Spea_1013: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -331 score = 3.81266 sequence = AGTGACTACCATTTCACT Site: position = -355 score = 4.56438 sequence = TATGCATAAATAAGCAAA Site: position = -310 score = 4.04144 sequence = TCTGCAAGAAAAATCACT Gene: Shal_1061: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
*
Shewanella piezotolerans WP3 Site: position = -310 score = 4.34918 sequence = TTTGCAATAAAAATCACT Site: position = -331 score = 4.31189 sequence = AGTGACTATCATTTCACT Site: position = -355 score = 4.42641 sequence = TCTGCATAATTAGTCAAG Gene: swp_3803: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
*
Shewanella sediminis HAW-EB3 Site: position = -62 score = 3.75748 sequence = GGTGAATATCTATACTAA Site: position = -127 score = 4.29742 sequence = ACTCAAATTTTATGCAAT Site: position = -301 score = 4.0573 sequence = CGTGCAAAAAAAATCACT Gene: Ssed_1126: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
*
Shewanella woodyi ATCC 51908 Site: position = -314 score = 3.86988 sequence = ATTCATTATATTTGCAAT Site: position = -349 score = 4.68229 sequence = ACTGCATAAATAAGCAAA Gene: Swoo_1221: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
Glutamate synthase [NADPH] large chain (EC 1.4.1.13) |
| gltD |
Gene: SO_1324: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Gene: Sputcn32_1135: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Gene: Sputw3181_3029: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Gene: Shewana3_3051: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Gene: Shewmr4_2873: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Gene: Shewmr7_2955: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Gene: Sbal_1177: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Gene: Sden_2791: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Gene: Sfri_2952: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Gene: Sama_0856: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Gene: Shew_1031: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Gene: Spea_1012: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Gene: Shal_1060: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Gene: swp_3804: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Gene: Ssed_1125: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Gene: Swoo_1220: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
| CRON 23. | |||||||||||||||||
| omp(Arg) |
*
Shewanella oneidensis MR-1 Site: position = -204 score = 3.70873 sequence = TATGTGTAAGCATTCAAT Site: position = -383 score = 4.69206 sequence = TATGCATATTTTTTCATT Gene: SO_2427: TonB-dependent receptor |
*
Shewanella putrefaciens CN-32 Site: position = -478 score = 3.99879 sequence = TGTGCATAAAAATTACAT Gene: Sputcn32_1940: TonB-dependent receptor |
*
Shewanella sp W3-18-1 Site: position = -517 score = 3.78059 sequence = GATGCATATTTGTTAATT Site: position = -478 score = 3.99879 sequence = TGTGCATAAAAATTACAT Gene: Sputw3181_2068: TonB-dependent receptor |
*
Shewanella sp ANA-3 Site: position = -106 score = 3.59395 sequence = ACTGAATGAAAGTGAATC Site: position = -468 score = 3.89644 sequence = AATCACAATTTATTCATT Site: position = -384 score = 3.82013 sequence = TATGCATATTTCTCCATA Gene: Shewana3_1958: TonB-dependent receptor |
*
Shewanella sp MR-4 Site: position = -457 score = 3.51446 sequence = AATCACAAGTTATTCATT Site: position = -373 score = 3.61848 sequence = CGTGCATAATTAATCGAC Site: position = -105 score = 3.59395 sequence = ACTGAATGAAAGTGAATC Gene: Shewmr4_1903: TonB-dependent receptor |
*
Shewanella sp MR-7 Site: position = -105 score = 3.59395 sequence = ACTGAATGAAAGTGAATC Site: position = -373 score = 3.87208 sequence = TGTGCATAATTAATCGAC Site: position = -457 score = 3.51446 sequence = AATCACAAGTTATTCATT Gene: Shewmr7_2075: TonB-dependent receptor |
*
Shewanella baltica OS155 Site: position = -390 score = 3.51561 sequence = TGTCTATAGCTATGCATT Site: position = -487 score = 3.8426 sequence = TTTGCATAAATATTACAA Gene: Sbal_2044: TonB-dependent receptor |
|
*
Shewanella frigidimarina NCIMB 400 Site: position = -451 score = 4.92008 sequence = TCTGAATAAATACTCAGT Site: position = -72 score = 4.18803 sequence = ACTGACCAATTATTCATA Gene: Sfri_2416: TonB-dependent receptor |
*
Shewanella amazonensis SB2B Site: position = -201 score = 5.47312 sequence = TTTGAATAAATATTCAGT Gene: Sama_1838: TonB-dependent receptor |
*
Shewanella loihica PV-4 Site: position = -609 score = 4.67882 sequence = AGTGCATTTAAATTGAAG Gene: Shew_2074: TonB-dependent receptor |
*
Shewanella pealeana ATCC 700345 Site: position = -188 score = 3.99104 sequence = TATGCATTATGATTCTGT Gene: Spea_2361: TonB-dependent receptor |
Gene: Shal_1923: TonB-dependent receptor |
*
Shewanella piezotolerans WP3 Site: position = -393 score = 3.71739 sequence = AGTTCATTTAATATCAAA Site: position = -612 score = 3.97884 sequence = TGTGATTTTTAATGCCTC Gene: swp_2362: TonB-dependent receptor |
*
Shewanella sediminis HAW-EB3 Site: position = -287 score = 3.59698 sequence = TTTGCATGGTTAGTGAAA Gene: Ssed_2036: TonB-dependent receptor |
*
Shewanella woodyi ATCC 51908 Site: position = -598 score = 3.93137 sequence = TGTGCATATAATTTAATC Site: position = -551 score = 4.30563 sequence = GATGAGTATATATTGATT Gene: Swoo_2565: TonB-dependent receptor |
TonB-dependent receptor |
| CRON 24. | |||||||||||||||||
| astC |
*
Shewanella oneidensis MR-1 Site: position = -307 score = 4.0509 sequence = ATTGTGTAGTTATTCATA Site: position = -247 score = 4.04527 sequence = TCTGACTAAATATGCTAA Gene: SO_0617: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
*
Shewanella putrefaciens CN-32 Site: position = -247 score = 3.95146 sequence = TCTGACTAAATATGCTAC Site: position = -307 score = 4.0509 sequence = ATTGTGTAGTTATTCATA Gene: Sputcn32_0645: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
*
Shewanella sp W3-18-1 Site: position = -247 score = 3.95146 sequence = TCTGACTAAATATGCTAC Site: position = -307 score = 4.0509 sequence = ATTGTGTAGTTATTCATA Gene: Sputw3181_3529: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
*
Shewanella sp ANA-3 Site: position = -247 score = 4.04527 sequence = TCTGACTAAATATGCTAA Site: position = -307 score = 4.0509 sequence = ATTGTGTAGTTATTCATA Gene: Shewana3_0610: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
*
Shewanella sp MR-4 Site: position = -247 score = 4.04527 sequence = TCTGACTAAATATGCTAA Site: position = -307 score = 4.0509 sequence = ATTGTGTAGTTATTCATA Gene: Shewmr4_0611: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
*
Shewanella sp MR-7 Site: position = -247 score = 4.04527 sequence = TCTGACTAAATATGCTAA Site: position = -307 score = 4.0509 sequence = ATTGTGTAGTTATTCATA Gene: Shewmr7_3419: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
*
Shewanella baltica OS155 Site: position = -247 score = 3.92601 sequence = TATGACTAATTATGCTGA Gene: Sbal_0571: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
*
Shewanella denitrificans OS217 Site: position = -188 score = 4.8496 sequence = ATTCAATTTATATGCAGA Site: position = -300 score = 4.37093 sequence = TATGGCTATTTATTCACT Gene: Sden_3193: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
*
Shewanella frigidimarina NCIMB 400 Site: position = -189 score = 4.02367 sequence = TATCAATCTTTATGCAGA Site: position = -301 score = 4.35816 sequence = TATGTGTAATTATTCACT Site: position = -241 score = 3.90693 sequence = TATGACTATTTATGCTTC Gene: Sfri_3299: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
*
Shewanella amazonensis SB2B Site: position = -247 score = 4.16318 sequence = TCTGACTAAATATGCCAT Site: position = -308 score = 3.8392 sequence = TATGTCTATTTATCCAAT Gene: Sama_3011: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
*
Shewanella loihica PV-4 Site: position = -304 score = 4.97062 sequence = TGTGACTATATATTCATA Site: position = -244 score = 4.04527 sequence = TCTGACTATTTATGCTCA Gene: Shew_0578: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
*
Shewanella pealeana ATCC 700345 Site: position = -242 score = 4.04527 sequence = TGTGACTATTTATGCTTA Site: position = -281 score = 3.6717 sequence = CGTGAATAACTAGTAATT Gene: Spea_3516: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -242 score = 4.00074 sequence = TATGACTATTTATGCTTA Gene: Shal_3610: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
*
Shewanella piezotolerans WP3 Site: position = -244 score = 4.00074 sequence = TATGACTAAATATGCTTA Gene: swp_0747: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
*
Shewanella sediminis HAW-EB3 Site: position = -246 score = 3.92601 sequence = TATGACTAATTATGCTTA Gene: Ssed_0809: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
*
Shewanella woodyi ATCC 51908 Site: position = -245 score = 4.16318 sequence = TATGACTAAATATGCTCT Gene: Swoo_0655: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
| astA |
Gene: SO_0618: Arginine N-succinyltransferase (EC 2.3.1.109) |
Gene: Sputcn32_0646: Arginine N-succinyltransferase (EC 2.3.1.109) |
Gene: Sputw3181_3528: Arginine N-succinyltransferase (EC 2.3.1.109) |
Gene: Shewana3_0611: Arginine N-succinyltransferase (EC 2.3.1.109) |
Gene: Shewmr4_0612: Arginine N-succinyltransferase (EC 2.3.1.109) |
Gene: Shewmr7_3418: Arginine N-succinyltransferase (EC 2.3.1.109) |
Gene: Sbal_0572: Arginine N-succinyltransferase (EC 2.3.1.109) |
Gene: Sden_3192: Arginine N-succinyltransferase (EC 2.3.1.109) |
Gene: Sfri_3298: Arginine N-succinyltransferase (EC 2.3.1.109) |
Gene: Sama_3010: Arginine N-succinyltransferase (EC 2.3.1.109) |
Gene: Shew_0579: Arginine N-succinyltransferase (EC 2.3.1.109) |
Gene: Spea_3515: Arginine N-succinyltransferase (EC 2.3.1.109) |
Gene: Shal_3609: Arginine N-succinyltransferase (EC 2.3.1.109) |
Gene: swp_0748: Arginine N-succinyltransferase (EC 2.3.1.109) |
Gene: Ssed_0810: Arginine N-succinyltransferase (EC 2.3.1.109) |
Gene: Swoo_0656: Arginine N-succinyltransferase (EC 2.3.1.109) |
Arginine N-succinyltransferase (EC 2.3.1.109) |
| astD |
Gene: SO_0619: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
Gene: Sputcn32_0647: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
Gene: Sputw3181_3527: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
Gene: Shewana3_0612: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
Gene: Shewmr4_0613: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
Gene: Shewmr7_3417: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
Gene: Sbal_0573: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
Gene: Sden_3191: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
Gene: Sfri_3297: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
Gene: Sama_3009: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
Gene: Shew_0580: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
Gene: Spea_3514: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
Gene: Shal_3608: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
Gene: swp_0749: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
Gene: Ssed_0811: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
Gene: Swoo_0657: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
| SO0620 |
Gene: SO_0620: Conserved hypothetical protein |
Gene: Sputcn32_0648: Conserved hypothetical protein |
Gene: Sputw3181_3526: Conserved hypothetical protein |
Gene: Shewana3_0613: Conserved hypothetical protein |
Gene: Shewmr4_0614: Conserved hypothetical protein |
Gene: Shewmr7_3416: Conserved hypothetical protein |
Gene: Sbal_0574: Conserved hypothetical protein |
|
Gene: Sfri_3296: Conserved hypothetical protein |
Gene: Sama_3008: Conserved hypothetical protein |
Gene: Shew_0581: Conserved hypothetical protein |
Gene: Spea_3513: Conserved hypothetical protein |
Gene: Shal_3607: Conserved hypothetical protein |
Gene: swp_0750: Conserved hypothetical protein |
Gene: Ssed_0812: Conserved hypothetical protein |
Gene: Swoo_0658: Conserved hypothetical protein |
Conserved hypothetical protein |
| CRON 25. | |||||||||||||||||
| aprE2 |
|
|
|
|
|
|
|
|
|
Gene: Sama_1876: Cold-active alkaline serine protease (EC 3.4.21.62) |
|
*2
Shewanella pealeana ATCC 700345 Site: position = -198 score = 4.80489 sequence = TTTGAACTAATATTCAGT Gene: Spea_0917: Cold-active alkaline serine protease (EC 3.4.21.62) Site: position = -256 score = 4.1716 sequence = ATTGCCAATACATTCAAA Gene: Spea_2300: Cold-active alkaline serine protease (EC 3.4.21.62) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -301 score = 4.40228 sequence = TCAGCATTTAAATTCAAG Site: position = -198 score = 4.56298 sequence = TTTGAACTATTATTCAAC Gene: Shal_0969: Cold-active alkaline serine protease (EC 3.4.21.62) |
*
Shewanella piezotolerans WP3 Site: position = -259 score = 4.00457 sequence = GGTGAATATTAGTTAATT Site: position = -308 score = 4.95362 sequence = GTTGAATTTTTACTCAAT Gene: swp_4207: Cold-active alkaline serine protease (EC 3.4.21.62) |
|
*
Shewanella woodyi ATCC 51908 Site: position = -113 score = 4.35047 sequence = AGTGAATAATTAGTTATT Site: position = -225 score = 4.07241 sequence = TCTAAATATTTACGCATT Gene: Swoo_4648: Cold-active alkaline serine protease (EC 3.4.21.62) |
Cold-active alkaline serine protease (EC 3.4.21.62) |
| CRON 26. | |||||||||||||||||
| potF |
*
Shewanella oneidensis MR-1 Site: position = -226 score = 4.16868 sequence = TTTGCTTGTTAATGCAAG Gene: SO_1270: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2) |
*
Shewanella putrefaciens CN-32 Site: position = -230 score = 4.56209 sequence = TATGATTGATAATGCAAT Gene: Sputcn32_1094: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2) |
*
Shewanella sp W3-18-1 Site: position = -230 score = 4.56209 sequence = TATGATTGATAATGCAAT Gene: Sputw3181_3070: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2) |
*
Shewanella sp ANA-3 Site: position = -376 score = 3.92915 sequence = TTTGAAATCCCATTCAAT Site: position = -164 score = 4.24206 sequence = ACTGCTTGTTAATGCAAG Gene: Shewana3_3097: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2) |
*
Shewanella sp MR-4 Site: position = -375 score = 4.23641 sequence = TGTGAAATCTCATTCAAT Site: position = -427 score = 4.42391 sequence = AGTGCTTTTAAATTGAAA Site: position = -164 score = 4.16868 sequence = TGTGCTTGTTAATGCAAG Gene: Shewmr4_2918: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2) |
*
Shewanella sp MR-7 Site: position = -375 score = 4.23641 sequence = TGTGAAATCTCATTCAAT Site: position = -427 score = 4.42391 sequence = AGTGCTTTTAAATTGAAA Site: position = -164 score = 4.16868 sequence = TGTGCTTGTTAATGCAAG Gene: Shewmr7_3000: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2) |
*
Shewanella baltica OS155 Site: position = -225 score = 4.68134 sequence = TTTGAGTGTTAATGCAAT Gene: Sbal_1108: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2) |
*
Shewanella denitrificans OS217 Site: position = -163 score = 4.31209 sequence = GCTGATTAATCATGCAAA Site: position = -266 score = 4.86174 sequence = AATGAGTTTTTATGCAAA Gene: Sden_3031: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2) |
*
Shewanella frigidimarina NCIMB 400 Site: position = -228 score = 4.01395 sequence = AGTGATTTTTTAACCAAT Site: position = -249 score = 3.86863 sequence = ACTGAATGATTATTGCAA Gene: Sfri_3009: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2) |
*
Shewanella amazonensis SB2B Site: position = -239 score = 4.13791 sequence = ACTGATTTTTAAAGCAAG Site: position = -177 score = 3.60866 sequence = ACTGAGTGCATATTAAAA Gene: Sama_2642: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2) |
*
Shewanella loihica PV-4 Site: position = -179 score = 4.23673 sequence = ATTAGATATAAATTCATA Gene: Shew_0973: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2) |
Gene: Spea_0946: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2) |
Gene: Shal_0996: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2) |
Gene: swp_4158: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2) |
*
Shewanella sediminis HAW-EB3 Site: position = -257 score = 3.90094 sequence = TGTGACTGACGATTCAAT Gene: Ssed_1061: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2) |
Gene: Swoo_1131: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2) |
Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2) |
| potG |
Gene: SO_1271: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2) |
Gene: Sputcn32_1095: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2) |
Gene: Sputw3181_3069: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2) |
Gene: Shewana3_3096: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2) |
Gene: Shewmr4_2917: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2) |
Gene: Shewmr7_2999: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2) |
Gene: Sbal_1109: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2) |
Gene: Sden_3030: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2) |
Gene: Sfri_3008: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2) |
Gene: Sama_2641: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2) |
Gene: Shew_0974: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2) |
Gene: Spea_0947: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2) |
Gene: Shal_0997: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2) |
Gene: swp_4157: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2) |
Gene: Ssed_1062: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2) |
Gene: Swoo_1132: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2) |
Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2) |
| potH |
Gene: SO_1272: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2) |
Gene: Sputcn32_1096: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2) |
Gene: Sputw3181_3068: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2) |
Gene: Shewana3_3095: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2) |
Gene: Shewmr4_2916: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2) |
Gene: Shewmr7_2998: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2) |
Gene: Sbal_1110: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2) |
Gene: Sden_3029: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2) |
Gene: Sfri_3007: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2) |
Gene: Sama_2640: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2) |
Gene: Shew_0975: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2) |
Gene: Spea_0948: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2) |
Gene: Shal_0998: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2) |
Gene: swp_4156: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2) |
Gene: Ssed_1063: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2) |
Gene: Swoo_1133: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2) |
Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2) |
| potI |
Gene: SO_1273: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2) |
Gene: Sputcn32_1097: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2) |
Gene: Sputw3181_3067: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2) |
Gene: Shewana3_3094: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2) |
Gene: Shewmr4_2915: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2) |
Gene: Shewmr7_2997: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2) |
Gene: Sbal_1111: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2) |
Gene: Sden_3028: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2) |
Gene: Sfri_3006: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2) |
Gene: Sama_2639: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2) |
Gene: Shew_0976: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2) |
Gene: Spea_0949: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2) |
Gene: Shal_0999: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2) |
Gene: swp_4154: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2) |
Gene: Ssed_1064: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2) |
Gene: Swoo_1134: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2) |
Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2) |
| CRON 27. | |||||||||||||||||
| SO2753 |
*
Shewanella oneidensis MR-1 Site: position = -445 score = 4.1185 sequence = AATGCATTTGCAATCAAC Site: position = -173 score = 4.95643 sequence = AATGCATAAAAATACACT Gene: SO_2753: Prolyl endopeptidase (EC 3.4.21.26) |
*
Shewanella putrefaciens CN-32 Site: position = -444 score = 4.1185 sequence = AATGCATTTGCAATCAAC Site: position = -193 score = 3.61079 sequence = AATAACTTATCAATCAGT Site: position = -172 score = 4.95643 sequence = AGTGCATAAAAATACATT Gene: Sputcn32_1602: Prolyl endopeptidase (EC 3.4.21.26) |
*
Shewanella sp W3-18-1 Site: position = -172 score = 4.95643 sequence = AGTGCATAAAAATACATT Site: position = -193 score = 3.61079 sequence = AATAACTTATCAATCAGT Site: position = -444 score = 4.1185 sequence = AATGCATTTGCAATCAAC Gene: Sputw3181_2420: Prolyl endopeptidase (EC 3.4.21.26) |
*
Shewanella sp ANA-3 Site: position = -172 score = 4.95643 sequence = AATGCATAAAAATACACT Site: position = -444 score = 4.1185 sequence = AATGCATTTGCAATCAAC Gene: Shewana3_2536: Prolyl endopeptidase (EC 3.4.21.26) |
*
Shewanella sp MR-4 Site: position = -445 score = 4.1185 sequence = AATGCATTTGCAATCAAC Site: position = -182 score = 4.17951 sequence = AGTCAAAATTAATGCATA Site: position = -172 score = 4.95643 sequence = AATGCATAAAAATACACT Gene: Shewmr4_2373: Prolyl endopeptidase (EC 3.4.21.26) |
*
Shewanella sp MR-7 Site: position = -172 score = 4.95643 sequence = AATGCATAAAAATACACT Site: position = -445 score = 4.1185 sequence = AATGCATTTGCAATCAAC Gene: Shewmr7_2445: Prolyl endopeptidase (EC 3.4.21.26) |
*
Shewanella baltica OS155 Site: position = -444 score = 4.1185 sequence = AATGCATTTGCAATCAAC Site: position = -192 score = 3.91853 sequence = AATAACTTATAAATCACT Site: position = -171 score = 4.92623 sequence = AGTGCATAATAATACACT Gene: Sbal_1741: Prolyl endopeptidase (EC 3.4.21.26) |
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Gene: Sama_2091: Prolyl endopeptidase (EC 3.4.21.26) |
Gene: Shew_1522: Prolyl endopeptidase (EC 3.4.21.26) |
*
Shewanella pealeana ATCC 700345 Site: position = -297 score = 4.23741 sequence = ATTGAATAAAGATGAACT Site: position = -215 score = 3.93597 sequence = CATGATATTTAATTCATC Gene: Spea_2569: Prolyl endopeptidase (EC 3.4.21.26) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -230 score = 3.93597 sequence = CATGATATTTAATTCATC Gene: Shal_1686: Prolyl endopeptidase (EC 3.4.21.26) |
Gene: swp_1825: Prolyl endopeptidase (EC 3.4.21.26) |
Gene: Ssed_1852: Prolyl endopeptidase (EC 3.4.21.26) |
Gene: Swoo_2736: Prolyl endopeptidase (EC 3.4.21.26) |
Prolyl endopeptidase (EC 3.4.21.26) |
| CRON 28. | |||||||||||||||||
| recN |
*
Shewanella oneidensis MR-1 Site: position = -49 score = 3.70555 sequence = ACTGTTTATCAATACAGT Site: position = -71 score = 4.61927 sequence = ACTGTATATAAAATCAGT Gene: SO_3462: DNA repair protein RecN |
*
Shewanella putrefaciens CN-32 Site: position = -71 score = 4.61927 sequence = ACTGTATATAAAATCAGT Site: position = -49 score = 3.70555 sequence = ACTGTTTATCAATACAGT Gene: Sputcn32_2771: DNA repair protein RecN |
*
Shewanella sp W3-18-1 Site: position = -49 score = 3.70555 sequence = ACTGTTTATCAATACAGT Site: position = -71 score = 4.61927 sequence = ACTGTATATAAAATCAGT Gene: Sputw3181_1241: DNA repair protein RecN |
*
Shewanella sp ANA-3 Site: position = -71 score = 5.12778 sequence = ACTGTATATAAATTCAGT Site: position = -49 score = 3.70555 sequence = ACTGTTTATCAATACAGT Gene: Shewana3_1104: DNA repair protein RecN |
*
Shewanella sp MR-4 Site: position = -71 score = 5.12778 sequence = ACTGTATATAAATTCAGT Site: position = -49 score = 3.70555 sequence = ACTGTTTATCAATACAGT Gene: Shewmr4_1104: DNA repair protein RecN |
*
Shewanella sp MR-7 Site: position = -49 score = 3.70555 sequence = ACTGTTTATCAATACAGT Site: position = -71 score = 5.12778 sequence = ACTGTATATAAATTCAGT Gene: Shewmr7_1170: DNA repair protein RecN |
*
Shewanella baltica OS155 Site: position = -49 score = 3.70555 sequence = ACTGTTTATCAATACAGT Site: position = -71 score = 4.61927 sequence = ACTGTATATAAAATCAGT Site: position = -137 score = 3.61288 sequence = CATGCATAATCAGTTAAT Gene: Sbal_3153: DNA repair protein RecN |
*
Shewanella denitrificans OS217 Site: position = -95 score = 3.67382 sequence = ACTCAAAATTAACTCAGC Site: position = -70 score = 3.90167 sequence = ACTGTATAAAAAACCAGT Site: position = -48 score = 3.70555 sequence = ACTGTTTATCAATACAGT Gene: Sden_1151: DNA repair protein RecN |
*
Shewanella frigidimarina NCIMB 400 Site: position = -112 score = 3.6044 sequence = GATGATAAAATAGTCAAC Site: position = -71 score = 4.61927 sequence = ACTGTATATAAAATCAGT Site: position = -49 score = 3.70555 sequence = ACTGTTTATCAATACAGT Gene: Sfri_1043: DNA repair protein RecN |
*
Shewanella amazonensis SB2B Site: position = -72 score = 3.83803 sequence = ACTGTACAAAAAATCAGT Site: position = -50 score = 3.70555 sequence = ACTGTGTATCAATACAGT Gene: Sama_1026: DNA repair protein RecN |
*
Shewanella loihica PV-4 Site: position = -61 score = 5.05305 sequence = ACTGTATAAAAATTCAGT Gene: Shew_1196: DNA repair protein RecN |
Gene: Spea_1169: DNA repair protein RecN |
Gene: Shal_1212: DNA repair protein RecN |
Gene: swp_1346: DNA repair protein RecN |
*
Shewanella sediminis HAW-EB3 Site: position = -61 score = 4.61927 sequence = ACTGTATATAAAATCAGT Gene: Ssed_1281: DNA repair protein RecN |
Gene: Swoo_3359: DNA repair protein RecN |
DNA repair protein RecN |
| CRON 29. | |||||||||||||||||
| Sputw3181_2571 |
|
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*
Shewanella sp W3-18-1 Site: position = -852 score = 4.87035 sequence = TATGCATAACAATTCAAA Gene: Sputw3181_3820: Transposase, IS4 family |
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Transposase, IS4 family |
| speF |
*
Shewanella oneidensis MR-1 Site: position = -736 score = 5.11118 sequence = TCTGCATTTTTATGCAAA Gene: SO_0314: Ornithine decarboxylase (EC 4.1.1.17) |
*
Shewanella putrefaciens CN-32 Site: position = -754 score = 4.87035 sequence = TATGCATAACAATTCAAA Gene: Sputcn32_3679: Ornithine decarboxylase (EC 4.1.1.17) |
Gene: Sputw3181_3821: Ornithine decarboxylase (EC 4.1.1.17) |
*
Shewanella sp ANA-3 Site: position = -742 score = 5.25234 sequence = TCTGCATTTTTATTCAAA Gene: Shewana3_3871: Ornithine decarboxylase (EC 4.1.1.17) |
*
Shewanella sp MR-4 Site: position = -742 score = 5.25234 sequence = TCTGCATTTTTATTCAAA Gene: Shewmr4_3667: Ornithine decarboxylase (EC 4.1.1.17) |
*
Shewanella sp MR-7 Site: position = -741 score = 4.90211 sequence = TTTGCATTTTTATGCAAG Gene: Shewmr7_0278: Ornithine decarboxylase (EC 4.1.1.17) |
*
Shewanella baltica OS155 Site: position = -749 score = 4.16785 sequence = TATGCATAACCATGCAGG Gene: Sbal_4084: Ornithine decarboxylase (EC 4.1.1.17) |
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*
Shewanella amazonensis SB2B Site: position = -179 score = 4.29149 sequence = ATCGCATAAAAATACAAT Site: position = -52 score = 4.21577 sequence = ATTTAATAAATATTGACA Gene: Sama_3334: Ornithine decarboxylase (EC 4.1.1.17) |
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Ornithine decarboxylase (EC 4.1.1.17) |
| potE |
Gene: SO_0313: Putrescine/proton symporter, putrescine/ornithine antiporter PotE |
Gene: Sputcn32_3680: Putrescine/proton symporter, putrescine/ornithine antiporter PotE |
Gene: Sputw3181_3822: Putrescine/proton symporter, putrescine/ornithine antiporter PotE |
Gene: Shewana3_3872: Putrescine/proton symporter, putrescine/ornithine antiporter PotE |
Gene: Shewmr4_3668: Putrescine/proton symporter, putrescine/ornithine antiporter PotE |
Gene: Shewmr7_0277: Putrescine/proton symporter, putrescine/ornithine antiporter PotE |
Gene: Sbal_4085: Putrescine/proton symporter, putrescine/ornithine antiporter PotE |
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Gene: Sama_3335: Putrescine/proton symporter, putrescine/ornithine antiporter PotE |
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Putrescine/proton symporter, putrescine/ornithine antiporter PotE |
| SO0312 |
Gene: SO_0312: Predicted outer membrane porin |
Gene: Sputcn32_3681: Predicted outer membrane porin |
Gene: Sputw3181_3823: Predicted outer membrane porin |
Gene: Shewana3_3873: Predicted outer membrane porin |
Gene: Shewmr4_3669: Predicted outer membrane porin |
Gene: Shewmr7_0276: Predicted outer membrane porin |
Gene: Sbal_4086: Predicted outer membrane porin |
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Gene: Sama_3336: Predicted outer membrane porin |
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Predicted outer membrane porin |
| CRON 30. | |||||||||||||||||
| hisG |
Gene: SO_2074: ATP phosphoribosyltransferase (EC 2.4.2.17) |
Gene: Sputcn32_2178: ATP phosphoribosyltransferase (EC 2.4.2.17) |
Gene: Sputw3181_1831: ATP phosphoribosyltransferase (EC 2.4.2.17) |
Gene: Shewana3_1854: ATP phosphoribosyltransferase (EC 2.4.2.17) |
Gene: Shewmr4_1800: ATP phosphoribosyltransferase (EC 2.4.2.17) |
Gene: Shewmr7_2177: ATP phosphoribosyltransferase (EC 2.4.2.17) |
Gene: Sbal_2425: ATP phosphoribosyltransferase (EC 2.4.2.17) |
Gene: Sden_1618: ATP phosphoribosyltransferase (EC 2.4.2.17) |
*
Shewanella frigidimarina NCIMB 400 Site: position = -114 score = 4.10019 sequence = GGTGAACACTTATTCACA Site: position = -268 score = 4.23485 sequence = AGTGCATAAATCCTCATT Gene: Sfri_1720: ATP phosphoribosyltransferase (EC 2.4.2.17) |
*
Shewanella amazonensis SB2B Site: position = -352 score = 4.98913 sequence = TATGAATATTCATGCAAA Gene: Sama_1941: ATP phosphoribosyltransferase (EC 2.4.2.17) |
Gene: Shew_2197: ATP phosphoribosyltransferase (EC 2.4.2.17) |
Gene: Spea_2456: ATP phosphoribosyltransferase (EC 2.4.2.17) |
Gene: Shal_1824: ATP phosphoribosyltransferase (EC 2.4.2.17) |
*
Shewanella piezotolerans WP3 Site: position = -292 score = 4.42668 sequence = GATTAATTTAAATGCATC Gene: swp_3001: ATP phosphoribosyltransferase (EC 2.4.2.17) |
Gene: Ssed_2541: ATP phosphoribosyltransferase (EC 2.4.2.17) |
*
Shewanella woodyi ATCC 51908 Site: position = -317 score = 4.65735 sequence = ATTGATTAGATATTCATA Gene: Swoo_2092: ATP phosphoribosyltransferase (EC 2.4.2.17) |
ATP phosphoribosyltransferase (EC 2.4.2.17) |
| hisD |
Gene: SO_2073: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Sputcn32_2179: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Sputw3181_1830: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Shewana3_1853: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Shewmr4_1799: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Shewmr7_2178: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Sbal_2426: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Sden_1617: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Sfri_1719: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Sama_1942: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Shew_2198: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Spea_2457: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Shal_1823: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: swp_3003: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Ssed_2542: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: Swoo_2091: Histidinol dehydrogenase (EC 1.1.1.23) |
Histidinol dehydrogenase (EC 1.1.1.23) |
| hisC |
Gene: SO_2072: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Sputcn32_2180: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Sputw3181_1829: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Shewana3_1852: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Shewmr4_1798: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Shewmr7_2179: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Sbal_2427: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Sden_1616: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Sfri_1718: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Sama_1943: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Shew_2199: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Spea_2458: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Shal_1822: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: swp_3004: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Ssed_2543: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: Swoo_2090: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
| hisB |
Gene: SO_2071: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Sputcn32_2181: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Sputw3181_1828: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Shewana3_1851: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Shewmr4_1797: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Shewmr7_2180: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Sbal_2428: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Sden_1615: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Sfri_1717: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Sama_1944: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Shew_2200: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Spea_2459: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Shal_1821: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: swp_3005: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Ssed_2544: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: Swoo_2089: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
| hisH |
Gene: SO_2070: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Sputcn32_2182: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Sputw3181_1827: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Shewana3_1850: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Shewmr4_1796: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Shewmr7_2181: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Sbal_2429: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Sden_1614: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Sfri_1716: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Sama_1945: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Shew_2201: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Spea_2460: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Shal_1820: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: swp_3006: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Ssed_2545: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: Swoo_2088: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
| hisA |
Gene: SO_2069: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Sputcn32_2183: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Sputw3181_1826: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Shewana3_1849: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Shewmr4_1795: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Shewmr7_2182: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Sbal_2430: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Sden_1613: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Sfri_1715: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Sama_1946: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Shew_2202: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Spea_2461: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Shal_1819: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: swp_3007: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Ssed_2546: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: Swoo_2087: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
| hisF |
Gene: SO_2068: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: Sputcn32_2184: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: Sputw3181_1825: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: Shewana3_1848: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: Shewmr4_1794: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: Shewmr7_2183: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: Sbal_2431: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: Sden_1612: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: Sfri_1714: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: Sama_1947: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: Shew_2203: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: Spea_2462: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: Shal_1818: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: swp_3008: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: Ssed_2547: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
*
Shewanella woodyi ATCC 51908 Site: position = -153 score = 4.75329 sequence = ACTGCATTGTTATGCACC Gene: Swoo_2082: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
| hisI |
Gene: SO_2067: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Sputcn32_2185: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Sputw3181_1824: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Shewana3_1847: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Shewmr4_1793: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Shewmr7_2184: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Sbal_2432: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Sden_1611: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Sfri_1713: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Sama_1948: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Shew_2204: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Spea_2463: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Shal_1817: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: swp_3009: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Ssed_2548: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: Swoo_2081: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |